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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000373_pilon:271509..279603+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007727 ID=XLOC_007727|Name=XLOC_007727|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8095bp|location=Sequence derived from alignment at sc0000373_pilon:271509..279603+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGAATCCTCGAAAATGGCTACCAAGAATTCACTATCACTTTGCCA
AAAGTCATCAGAAGAAAAGAATGGCGGTGGTGATGGGGAAGTGAAATCAT
TGGCCATGGAGATGAAGGTATTtaNATTTTGccTTTttttcatttatttt
ggGATAGCTTTGAGATTCCACAGGCTTTTTAAAGCCTTactaaggcggca
atcacaaatatcttcgtttcgcgtcgTcgCCCCCCGACCGACtttgaaaa
ttgagtaaattgagtcggtgagttggtaaatttgtcggaatttttctgtc
aatgacctttccttcgttcaaaaattttattattgccaattttttgcgag
cgatttctagcgcatttgcAGCATTTTGACTTGTGCTcctgtttatcatt
acatgtgcCATACGACCCACGGtgcacggcatggcccgaacatgttcggg
cctgCCcggaccaTgctcgggccacaaaaaagtattattaacaTtttgtt
cggaccatgttcgcgTCATAGGGACGGATTTgctcgggccatgttcgggc
catatAAACCCGCATTCTCGATCCCCTCGATTCACTTCCCTATCCTCCAG
ATTTACCGCAGGTTTAGTGAAGTAGTTTTTAACATTAGAAAGAATAAAGT
GCGactgttaaatcttttttatgaaaacataAGCTATACGAACAAAAGGC
TTTGGTAACCAAAGTGTCAAAAAAGCAGGTAGGACGTCCCGTAGTAAAGT
TCTACTCTAAAACTCTCAAACAATTTGTGTTTCTaaagaaTTttttgtaa
atataATAAGTACGATTATAAAGGCCCCCGTAAAGTCTGAACAATCACGC
CTCacagcaaaaacCtttcaaaCcacGACCTttgatcacgcaatcacaaa
AACCGCTTAAAGGGCCTCATTAGAATTTAAGGAAATTTCCGTTATCAATT
GAAAGTTTTAAGCAAATGTGAACGCAATTTCCCCGCAATCATTATTATAC
CAATTATCTATTCTCTGTCtagggaacgggataaagaataaaaagaagac
catattatgtaagattcaaatcattttttttaataattttcctaacttaa
ttggaaaatagatgattaacttttatatttgaacaatatatatttgaata
aagatgaagatttttaaatttgtttgctaaaataaggaatttaaaatata
aatattgggtcctgaaattacacacGCGCGATTGTAGcaagttttcgaaa
atctggcccgaacatggtccgaaactgcgcggACCACGCGtgggccattt
ttaaaaagtattaatcaagaggcccgaacatgttccgCCGTGGGTCGTTG
TGCCATTTTGGGGTcggaggtcacagtgttcttcaaaggtcataatttta
aaccacccattacacgcgATTGTTTTGGcagctggctggctggcagtttt
cTCCAAGAGTGCACTCTAAAAacggatggaaaaatggaaacccgaaaatt
tttacgaccgactgaccgaccgactcactttttagacccaacgaggacgc
ccaatgaagatatttgtgattgccgcctaagtTGAAGTTCCTTACCAAAG
GCTGAAGAAGGGCCGTTCATAAAAAATTGGTTGGTTCCCGTTGGTTCCCG
TCACCCGACGATTTGAACTGAAGAATTAGAGTCTGAGAGTCGGAAACCAC
TTTTCCTGACAGCTGAAACTCCACCATCACCCTCCATGTTTTCTCTTTTG
AGAGAAAGAGCAAACGCTAATCTTgtccaaaaaaacaattcaaaacccAT
TAATTCCgtttttccccaattttcaaGTCCGATTTTACATTGCGGACCAT
ATGGaagcatcaaaacaaaccagcgGAGCTTTTGTGAAGTGAAAAAGAGG
CTTAGGGCGATCAAACGTCCCTTTACCACCCTTTTCTTCGGACTGTTTCg
ttcaaacagaaaatattttttgcccGACCGACCCACTTTTTGATGGttga
aatgacgggaaccaaggGATTTTTTACGAACGGCCAAGACAGTCTAGACT
TAAAACTCCCTATCAGGACAGGCAAATTTCCAGGTTTTGAGCTGCCACCA
TTTTTATTTCAACGATTGAGTTTGACTTCAGTTCGAAGAGCAAAATAATC
AACCCAGGTTCTGTTTAATTAGTTGGAAACtattaccgtaacttggtcta
atgtcgacacccctcctctaattctgacaccctttttatcagctgaaatt
tatagaaaggtcgaaactgtttttctttgtttattggTCAGAGagaaata
atcctttttcaatcagtgattcaagctttcatattattcctttctctaaa
gaagggtgtcggaattagatgagggatgtcgatattataCCAACTTACGG
TAAACGCAAAGAATTAATTTCTTTAGAATGGGCTTTtcatgggatcatcc
ccccctAGGAAGATgggggggAATCAGATTTTGGTGCCAGGGGGGAAGTG
AAAATTTCAAGCTTGATGGGGGAGAAAGCGAATAGGGGGTTTCAGTTCTT
AGTGGGGGGAGTAATAGCAGACTTCCTGTGGTTTTGGGCAGGCTTAGAGC
CTGTCCTTTCTtgggattttgagagtcttttttttgctaagTCGATGAGG
CTGGATCATCActttcgcaacccttatacaatggCTAGGGGTTTCCCATT
AgggggggAgttttaaagacaggtggggggggggAAAGGCATGGGGATTA
AGCCAtattaggggggaccaaaaagctggagACGCCGGCTTTTTCTGTTA
AGAGCATAGGATTAAATTTTTGTCATCCAGGCCAAGTACAAAAATTAGGA
TTGAGTTTCAAAATTTAAGCACAGATTGAGTTTCTGCTACTGTTATCCTG
GTACCGTCagctgctctaacttgggaggATTGGTCAAATCTTGGGACGGT
TGATATCTGGCCCAGTCAGGGCCTCCTTGATCTTTTATAATtattcggat
agaataaaaacatacctgatcaacacaacgaAGCCTTCTGTCTTGCTTTT
attctttccttcccaacaactttcgtttttgcttatgattataattaaaa
atttgaactttcccgtgggcgctattgggcgtaccgccatcatgaaatat
ttttcgtgaaagttTACCAACGCTGATATAAACTaaataggaaacaaata
ttaaatttgattctttttttgttcattatttctaaatttcacgataaaaa
gaactgtttacaaattatttttttaacggCTGTTggatcgacattgacat
atttaatgatgtcataatcaatgccatGCATATTTTGTTAGCGACATGCA
TATTTGTGTTATCACAAATACGAATGAAATGGAACGTTCCAGCAAAACGA
ACGATATGGAACGTTCTTGGACGTTTAGGGACGCTCTAAGAACGCTAGAG
AACGTTCTTGAACGTTCCTGGTCATTCCCTTTTATTTACTAGTTTAAGGA
TGTCTTAAAACGTTCGGAAGCGTTCCTGAACGTTCCATAACATTCTCAAA
CGTTCTTATTGAGTCAATATTAACCTTTGGACTCAAAAGATCGTTCGCAA
GCGTTCTGGAACGTTCTACAACGTTCTCGAGCGTTCTGGAACGTCTCTGA
ACGTTCTGGAACATTCAGAAACGTCCCTGAACATTTTAGAACGATTGAGG
ACGTTCTTGAACGTTCTAGGAACGCTATGGAACGTTCGTGAACGTTcagg
aacgtctcaagaacgCTCCGTTTTatttgtacttcaaatcgcttgtgatg
acacattttgtcaaaatccttttcattggataaataccactaaagtATAC
AAgagaagtaaacataaatttatcacCCGCGAGCACAGCTCAGCTAAGCG
CacctttcttaaaaattcactatCTAAGAATTGGaacgggcaaagattac
cgcgcgggctgatagcggacaaaggtagatattttcagttataatccaag
gtagagcAAACTAAatatagaaagggggtattttttagtgctatacgatg
atcggtattttttttgaattctatgtttagatttttctacccagccctgt
tgctatgtacgcgcgctctgttgctaagacctttgcttgttGAAATTCat
gtgcgtttggtttgggaacgcgaaacacgaatgcgaactacccatgtcta
aacttttcaatatatctccagaactaacggattttttaaaattctgtaaa
aagttccaagttcctgaatagttttactatgttctgtgaaaaaatcataa
ccatcagtcaaatactcgttcatctatttaagattgaagacaaaaatttg
cgaagaaaaataaaccttgagcacaaaaaatgcttttttaatcacttttt
tccaccaaagaacaaataatttttatagacttaccttccccaaacattga
agaagcctctactaattaaagtaaatgagataagataagataaaacctta
aaatcaaccagaatttacaacctttcgtccaaagcaaaagacgtgctttt
tgtcgccgccatcttgttttagaatgagaattccatTCGGTTCCAGTTCC
CACGctctttttttcatccaatcagatcgcgcgatttcactttggctttc
tctagtccaataagactacgggatttgagtcatgtgacatctctactAAA
AAACCCGCGccgaataaaatagaaatacagggggtcacactactggccaC
AGGAattgaaagcaagcaattaaggccaatattttttagtttttctgaag
gacaaaaggtataggaagctttactgaaagagggataaggctaggacaat
ctatttaaaagatatggacaaaaaaggcacttttttgggtgataattaag
attttacttagaaactttaattctcttaccccgtCTCGGGCCCCCCTGAG
ATGAGCAagggccacccctactgaaaatttcagatcaaaacaaacaagga
attattCCTGTAACTCTaggaaattggaaaaagctggttttgactgtttc
tgatcctaaagtgctattttttggtataaaagctatgcaatttatgtttg
gatttctagaaagcttacccattcattgtcaatatattttttatttgaca
gtaatctcttcatggaataaaactatagtcaaatcttgtagagtaatttt
tcaaaatttttttgccaaaatcaattttcgcatttcgcaattttacccta
cgcaaacgcacgtgaattggaagtgaaaccaaaataatttagcccACACT
GCCATTCGCGTTAACGCATCAATAAAAGTGAAAGGAGGTCCTGACTGATC
TGGCCTGTCAGTTTAAGCTTAAtttcctatatcaggattagaaacttaat
tttttgattcTGAGACCTTTTCGATGGTAATGTTTGAAAGCCATAATTTT
AACTTGTTTGTTCAATAAGAAGGCACTATACTAATGATGTAAAGTAGCTA
TTTGACAGGTATGATTTAGCTAATAGTATAACTTTGTGGATTGAcctttt
tgaaattaaacatacatttgtaaaaatatttgttttttatcttcatttta
ttCTAAATCTAGGTGTAGGAGGCTTTATTTTGATCTGTCGTTAAATCAAT
TAACTTTTTAGAATGCATGGACAAAGgtgtattttcaatttaatttgact
ttgGCCCCTTTAAAGCTTAGGCATTTTTATTATGAAATACTTTAATAAAT
AGATGgtctttttaaatttaaagataGTTGCTTTTTATCAAAGCTCCAGT
ATTGAGCCTTTTTTATTTGTAACAAGAGACccaaagattttaaataaact
taaaaaatcaGTGTTTTGATAGAAAAGtgctttgaaaatctttgggTTCG
TTAGATAGATTGTTGTTTGTCAAATGTTTGATGGACAAAATTCAATTAAT
TCTTGaagaatcttataaaaaatatcagtcttttgaccataaaatctttt
caccatttttaccattcaaaaagtacgtagaCTCTGAGGAAGGGGGAGTG
GGTCCTTTGAAAAGCCTAAAAAAGCGTACGTGGGGAGGGGGTCAATCAAG
AAAATGTACCTACgctttgcaattttttccaaactgttttCCCCAGTTTT
TTCTAACTTTCtatttgaaaagtcaaaatattataaaCCTTTTAAACCCA
TCTTACTTGTGTTATCCATATGTCACCCTATTATAatctttaagtttttt
taactttggtcgtgtcttgaaaaatttttattattaaaatcaaaatcgaa
cttGTGCCAGTCTATTTCTgttataatttaaattttttcctagagagggg
gggggggtgattgGAAAAGCGTACAAGGGTGGAGGGGTTGGTCGAATTTT
GCTTACTTTTGAGCGTATGTACTTTTGAATGGCCCCTTACCTTATTCACA
GCCCTCTCTCGAAATAGTCTCAGTATTTTGATCAGCCTTTAAATTAACCA
TATACACTTCCATACTTTTACTGCACTGCTACTGTTGCAAATTTTAAGGG
TATGTTCAGCTCAAATATGGAAAGTTTTGTCATAATGAAATCTCTATTCA
TCTTTTTGTAGTCGTTCAACTTAACAAAATGGATGTATGAAGATTCTCTT
ATCACATACACCATGCATTGCAGTCCAGCAGGAGAGAAGAAACATTTTTC
TGTCAAGATTTACCTTTTTCATCACTTCTGTCCTCTTCCCAGAATTATGT
ATTCATTGGTAAGTATATAAAGTCAATGtcagatttatttatttgtttct
ttattaTTCAAAAGAAAGGAAGAGAAGTGAGCTTCCATGGTcttacaata
tttttttcgttttactGATTTAATAAACAACAAGTTTTTGATTCTACACA
TTACTGtcttgaattttttagaaacttGACCAGTGGAGAGGACTTAATTT
AAAAGGCTGAGATCTAATGAAGTATTCAAATCACTCTTTCAAAAGGTTGT
TGTATAAAgtatattcattttttattttattctttttcagCTGGACAAAG
ACTACAACAATATCCCATGTCacgaccactgacctttatataaccctgga
ccaaacaatatctgccatctttgattgtccagggtatatataaaggtcag
tggtcacGACCATGCTTTATCTACCCTGGGTGTAAGTTTTCACCCAATAA
tactctttttgaaaacaaatattGCACATTGGTCAAATAAATCTTCAGTT
AGGGTGCAAGTGCAAAGTTTTGATTTGTAAGTACTGAGCTTTGGCTTGGC
TGACTATTTTTTCTGGAGTGTCCTTGAAGGTTATTCCTCCTCCGTCTTAC
CACCCTGGTTCTAAATTCTGAGGTGCCTATCATTTTTCTAAGGGTACTTT
TGAAATTAACAGGTTAATGGAACGGATTTGAATTCAAGTAAAACTCTTTT
GAAATGAAtgataattttaaattaattaagTAATATACAAACTAAGTCTA
ATAGTATATCAGCAATCAAGTTTTAAGCAATTTTAAATTGGTATTTAAGA
GGTCTTCCTATCCATACCTAGATCTTTCTCCCCTCCTCTGTTGCTTCCAT
CCTTggcatcaaaatttttcactcaTCCCTCAAAACCTATTCTCCATTCC
AAACCTATTTTCCATGAATCCAGAAGGGGAAGGAAACTATTCCTAGCtac
aaatatttctaaaattattaTACTGCATTTTGCTGAATTTTGCTGAGTAG
ATTCTACAATCAAACCATCAGAGTATAAATTTTCTCCTTACAGTGCAATA
TGTGTATGTTGTATTTCTCtcgctttcagaaaaaaatcagaagagATATA
GAACATGCTATTCGAAGGCAAAGAGCTGAAGACAACACCGAACCGTACCC
GGTAAGTTTTTAATTAATCGCTGAAAAGTGGATTCCTTTAAGTATcaact
ttttcatcttttaaaatttttaatgaaaaacgagTACAAAAATTACCACT
GGCACGGCACaagaaatctcaaaagaaaCCAGCATTGAAAACAACATCGA
AACCTCTTCCAACAGCAAAAATGGGCAAAGCTCTTCCAACAGTAA Coding sequence (CDS) from alignment at sc0000373_pilon:271509..279603+ >XLOC_007727 ID=XLOC_007727|Name=XLOC_007727|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=846bp|location=Sequence derived from alignment at sc0000373_pilon:271509..279603+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGAATCCTCGAAAATGGCTACCAAGAATTCACTATCACTTTGCCA
AAAGTCATCAGAAGAAAAGAATGGCGGTGGTGATGGGGAAGTGAAATCAT
TGGCCATGGAGATGAAGATGGAAGAATCCTCGAAAATGGCTACCAAGAAT
TCACTATCACTTTGCCAAAAGTCATCAGAAGAAAAGAATGGCGGTGGTGA
TGGGGAAGTGAAATCATTGGCCATGGAGATGAAGTCGTTCAACTTAACAA
AATGGATGTATGAAGATTCTCTTATCACATACACCATGCATTGCAGTCCA
GCAGGAGAGAAGAAACATTTTTCTGTCAAGATTTACCTTTTTCATCACTT
CTGTCCTCTTCCCAGAATTATGTATTCATTGTCGTTCAACTTAACAAAAT
GGATGTATGAAGATTCTCTTATCACATACACCATGCATTGCAGTCCAGCA
GGAGAGAAGAAACATTTTTCTGTCAAGATTTACCTTTTTCATCACTTCTG
TCCTCTTCCCAGAATTATGTATTCATTGCTGGACAAAGACTACAACAATA
TCCCATCTGGACAAAGACTACAACAATATCCCATgtcacGACCATGCTTT
ATCTACCCTGGGTgtcacGACCATGCTTTATCTACCCTGGGTaaaaaaat
cagaagagATATAGAACATGCTATTCGAAGGCAAAGAGCTGAAGACAACA
CCGAACCGTACCCGaaaaaaatcagaagagATATAGAACATGCTATTCGA
AGGCAAAGAGCTGAAGACAACACCGAACCGTACCCGCAAAAATGGGCAAA
GCTCTTCCAACAGTAACAAAAATGGGCAAAGCTCTTCCAACAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000373_pilon | genome | sc0000373_pilon:271509..279603 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 394-423:8066 |
| Aaloc | 322-393:7830 |
| Aaloc | 295-321:7155 |
| Aaloc | 265-291:7041 |
| Aaloc | 118-264:6612 |
| Aaloc | 1-117:1 |
|
