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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000243_pilon:364123..367097- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007699 ID=XLOC_007699|Name=XLOC_007699|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2975bp|location=Sequence derived from alignment at sc0000243_pilon:364123..367097- (Clytia hemisphaerica_ch_hm2_pilon)
GTTAATGGCAAAATACAACATGGTAAATATATCACGTTTTTTATCTGTAG
AGAAACCAGGATTTGAGTACATTTAAGAAAGAAATTTGGAATTAGAAATT
AAGAATATCGCAAGAACACCTGCATTTTACACCTTTTTTACATGTAGAGA
GCTCATGTTTTGAGCACATTAAAGGTTGAAATTTGGAGCTAGAAAATAAG
AATATCATTTGAATTCTCGTTCTGTTCCGAAACTATTCAAGGCTTTTTTT
GGCTAACCTGTAAAGCTAAATAATTATTCTAACCGATAGTACAGTTAGTT
TTGTATTAATTCAAAGTGGTTAAGTAAGTTTGTGACCCTTTTCACTAGCT
ATCTACCCGAACATATGGGATGTCTCCACTTACCCTTGATTCTTACCTTA
ATTGTTGAGCATCAAGCGGGCATCTTACGGGTCGTAGCTGGATGCTCTAC
CTCCATGCTACGGCTGCTTTTCGTATAAATCTTAAAATTGTGTACATTCT
TTTTCATTCAGGCAATGGTACATTTCTGATAAACGGTATCTTTCCAATCA
CAAACGAAAATGAAGAATTAAACCCTCAACTCGGTATAATGTATTCAGAG
GCGATGAAATGGGCCATACAAGAAGTCAACAAAAATCGATCCTATTTACA
CGGATACCAATTCGATGTCAACAAGATTTATGATTCGATTAAAGAAGAGC
AGGTCCAGAAAAATGTTTTGGATACTTTCATGGAGAAGATACCGTTCCTT
GTAGGTCCGTATTCCTCGGATACGTCTTACACGTCAAGTATCTTGACCAA
GACGTTTCAGGATATCAACGGGATCAGCTACAGTGCAACGTTCTCGGATT
TCGACATGATGAATTCGGACGAAGAACGTATGTTGAGAACCGTACCGTCG
GATCGTTTCCGTGTCGACGCCGTTCTAGCGTTGATTAAAGATCTACGTTG
GAATTTCGTTTCCGTTGTAAGCTCTTACGGATATAATGGGGAGCGCGAAG
CGTTACATCTGACGTCCAAGATTTCGTCTGTGGGTGCTTGTCTCGCGGCA
CAAATCGATCTCGCCAAATCACCAACAAACGAAGATTACCAAAAAACCAT
CGATAATTTGCGGTTAGATTCTCGCCTCAAAGTTGTCGTTTTATTTACAT
CTGGGAAAGACACGAGAAATTTTATGGCAATGTTAAAGAAACTGAATTTG
GCGAATCGGTTTAATTTGATCTGCGCGTACGGGTGTACAAACTATATTAA
CGTTATTGAAGGAAATGAACTCGTGGCTGAAGGAGCTCTAAGTCTCGATG
TCAAACTACCAGATACTTCTAAATTTACCGAATATTTTCTCAACAAAAAG
CCCACAGCTAATTCGTTAGAACCTTTCAATATATATTGGGAAAGACTTTT
TGATTGCTCTTTAAATCAAACGAACATGCGAAAATACTTAAAAATGTGCA
CCATGAAGGAAAGTCTCAAACTGGGGTCTGGATACTACATCAATACCCCC
GTCCACACTGTCATTAATGCTGTTTTTCATTTTGCACGTGTTGTCCACAG
CTTCTCATTAGTTTATTGTCACGTGGATCGGAATTGGGTGAACAAGACAA
TGCCATGCCCTCTCGACCCTTCAACTGCCAAATCCTACTCCATGTTTTTT
CATCGCGTCCTAAAGAAAAGTGCACACAAAGATGGGACGCTTTACACTGG
CACTATTGAGCCGTTCACTATGGGTGTTGGAAATGAAGTCGATGATGGTA
AGGTCCAGTATGAAGTTCACAAGTATTCGTTTAAAAATCGGGAAAACACG
AATACAAAAATATGGCAATGGGTTGCAGATCGTCAAAGTAAAAAACCGGG
AGTCGGGAAATTTTTAGAAGCCTGGTACTCGGCTTCGCCGAATATGACGA
TCGTGGAACATCGAGGAACGTGCAGTAAAGAATGTCCTTTAGGATCAATT
CGTGATTACGATCGAAACTCATTAAAATCAAAATGTTGCTGGTCGTGTCA
AGCGTGTCCGAAAAATCACCGTGTCATGAATAATACGTGTCAGCCGTGTA
AGCAAGCCGAAGTTGTCGGACCACGGTACGGAACATGCCTTTTAATGCAG
GAAAGAATGATAAGTTGGAGAGAGCCGATTGTTCTATGTTTTATTGTTTT
ATCAATCCTCGGGATCTGCTTAACCGTGTTTGTAGCGCTCGTTTTTTGTC
GTTACAACGATAACCGTATCGTGAGAGCAGCCGGCCGTGACTTGAGTTAC
ATGATTTTACTCGGCATCTGTTTCACATTTTCATGCTGTTTTGTTTTCAT
ATGGGAGACAACTCAATCGACGTGTATCTTACGAGGCGGCTTACCTGGAT
TTTCGTTCCTGACGTGTTACGCTCCTCTCTTCTTAAAAACGATTCGTATC
TATCGTATATTTGTCGGTGCGCAAGTTTCCGTATCCCGACCTGCTTTAGT
AAGCACGCAATCACAATTCATAGCTTTGTTTGTGATCCTATCAACCCAAC
TATTAATCAGTGTCGTTTGGTTCGTATCGAAGATTCCAACACCGGAGATT
ATAGTTACCGGAGAATACGTAACCAGTCATTGTAGTGGTGACGCCAGTCC
CATTCTGTTATTCTTGAACTTATCTCTAAGCGTCATATTCATGGTGTCGT
GTACCGTACTAGCCTTCAAGACACGACATTTTCCGAAAAACTTTAACGAG
GCTAAATTTATTGGAATCACGCTTTACATCACTTGTGTAGGATGGGCCGT
ATTTCTACCAGTTTATTTTTTAGCACCCCATTTACACCGTGACTTTATGA
AAGAATTATTGATGTGTGCTGTATGTACTTTTATAGGCTATGTTACACTG
TTTGGTTTATTTGGACACAAAATGAAGCTGTTGTTATTCGGACCACTTCC
GCCCGCGCGACAGGGGAGTATTCCTACATGGTATATACCACGGGAACATT
CGAAAAGTCTTTCAAGTACTTATAG Coding sequence (CDS) from alignment at sc0000243_pilon:364123..367097- >XLOC_007699 ID=XLOC_007699|Name=XLOC_007699|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3450bp|location=Sequence derived from alignment at sc0000243_pilon:364123..367097- (Clytia hemisphaerica_ch_hm2_pilon)
GTTAATGGCAAAATACAACATGGTTAATGGCAAAATACAACATGGCAATG
GTACATTTCTGATAAACGGTATCTTTCCAATCACAAACGAAAATGAAGAA
TTAAACCCTCAACTCGGTATAATGTATTCAGAGGCGATGAAATGGGCCAT
ACAAGAAGTCAACAAAAATCGATCCTATTTACACGGATACCAATTCGATG
TCAACAAGATTTATGATTCGATTAAAGAAGAGCAGGTCCAGAAAAATGTT
TTGGATACTTTCATGGAGAAGATACCGTTCCTTGTAGGTCCGTATTCCTC
GGATACGTCTTACACGTCAAGTATCTTGACCAAGACGTTTCAGGATATCA
ACGGGATCAGCTACAGTGCAACGTTCTCGGATTTCGACATGATGAATTCG
GACGAAGAACGTATGTTGAGAACCGTACCGTCGGATCGTTTCCGTGTCGA
CGCCGTTCTAGCGTTGATTAAAGATCTACGTTGGAATTTCGTTTCCGTTG
TAAGCTCTTACGGATATAATGGGGAGCGCGAAGCGTTACATCTGACGTCC
AAGATTTCGTCTGTGGGTGCTTGTCTCGCGGCACAAATCGATCTCGCCAA
ATCACCAACAAACGAAGATTACCAAAAAACCATCGATAATTTGCGGTTAG
ATTCTCGCCTCAAAGTTGTCGTTTTATTTACATCTGGGAAAGACACGAGA
AATTTTATGGCAATGTTAAAGAAACTGAATTTGGCGAATCGGTTTAATTT
GATCTGCGCGTACGGGTGTACAAACTATATTAACGTTATTGAAGGAAATG
AACTCGTGGCTGAAGGAGCTCTAAGTCTCGATGTCAAACTACCAGATACT
TCTAAATTTACCGAATATTTTCTCAACAAAAAGCCCACAGCTAATTCGTT
AGAACCTTTCAATATATATTGGGAAAGACTTTTTGATTGCTCTTTAAATC
AAACGAACATGCGAAAATACTTAAAAATGTGCACCATGAAGGAAAGTCTC
AAACTGGGGTCTGGATACTACATCAATACCCCCGTCCACACTGTCATTAA
TGCTGTTTTTCATTTTGCACGTGTTGTCCACAGCTTCTCATTAGTTTATT
GTCACGTGGATCGGAATTGGGTGAACAAGACAATGCCATGCCCTCTCGAC
CCTTCAACTGCCAAATCCTACTCCATGTTTTTTCATCGCGTCCTAAAGAA
AAGTGCACACAAAGATGGGACGCTTTACACTGGCACTATTGAGCCGTTCA
CTATGGGTGTTGGAAATGAAGTCGATGATGGTAAGGTCCAGTATGAAGTT
CACAAGTATTCGTTTAAAAATCGGGAAAACACGAATACAAAAATATGGCA
ATGGGTTGCAGATCGTCAAAGTAAAAAACCGGGAGTCGGGAAATTTTTAG
AAGCCTGGTACTCGGCTTCGCCGAATATGACGATCGTGGAACATCGAGGA
ACGTGCAGTAAAGAATGTCCTTTAGGATCAATTCGTGATTACGATCGAAA
CTCATTAAAATCAAAATGTTGCTGGTCGTGTCAAGCGTGTCCGAAAAATC
ACCGTGTCATGAATAATACGTGTCAGCCGTGTAAGCAAGCCGAAGTTGTC
GGACCACGGCAATGGTACATTTCTGATAAACGGTATCTTTCCAATCACAA
ACGAAAATGAAGAATTAAACCCTCAACTCGGTATAATGTATTCAGAGGCG
ATGAAATGGGCCATACAAGAAGTCAACAAAAATCGATCCTATTTACACGG
ATACCAATTCGATGTCAACAAGATTTATGATTCGATTAAAGAAGAGCAGG
TCCAGAAAAATGTTTTGGATACTTTCATGGAGAAGATACCGTTCCTTGTA
GGTCCGTATTCCTCGGATACGTCTTACACGTCAAGTATCTTGACCAAGAC
GTTTCAGGATATCAACGGGATCAGCTACAGTGCAACGTTCTCGGATTTCG
ACATGATGAATTCGGACGAAGAACGTATGTTGAGAACCGTACCGTCGGAT
CGTTTCCGTGTCGACGCCGTTCTAGCGTTGATTAAAGATCTACGTTGGAA
TTTCGTTTCCGTTGTAAGCTCTTACGGATATAATGGGGAGCGCGAAGCGT
TACATCTGACGTCCAAGATTTCGTCTGTGGGTGCTTGTCTCGCGGCACAA
ATCGATCTCGCCAAATCACCAACAAACGAAGATTACCAAAAAACCATCGA
TAATTTGCGGTTAGATTCTCGCCTCAAAGTTGTCGTTTTATTTACATCTG
GGAAAGACACGAGAAATTTTATGGCAATGTTAAAGAAACTGAATTTGGCG
AATCGGTTTAATTTGATCTGCGCGTACGGGTGTACAAACTATATTAACGT
TATTGAAGGAAATGAACTCGTGGCTGAAGGAGCTCTAAGTCTCGATGTCA
AACTACCAGATACTTCTAAATTTACCGAATATTTTCTCAACAAAAAGCCC
ACAGCTAATTCGTTAGAACCTTTCAATATATATTGGGAAAGACTTTTTGA
TTGCTCTTTAAATCAAACGAACATGCGAAAATACTTAAAAATGTGCACCA
TGAAGGAAAGTCTCAAACTGGGGTCTGGATACTACATCAATACCCCCGTC
CACACTGTCATTAATGCTGTTTTTCATTTTGCACGTGTTGTCCACAGCTT
CTCATTAGTTTATTGTCACGTGGATCGGAATTGGGTGAACAAGACAATGC
CATGCCCTCTCGACCCTTCAACTGCCAAATCCTACTCCATGTTTTTTCAT
CGCGTCCTAAAGAAAAGTGCACACAAAGATGGGACGCTTTACACTGGCAC
TATTGAGCCGTTCACTATGGGTGTTGGAAATGAAGTCGATGATGGTAAGG
TCCAGTATGAAGTTCACAAGTATTCGTTTAAAAATCGGGAAAACACGAAT
ACAAAAATATGGCAATGGGTTGCAGATCGTCAAAGTAAAAAACCGGGAGT
CGGGAAATTTTTAGAAGCCTGGTACTCGGCTTCGCCGAATATGACGATCG
TGGAACATCGAGGAACGTGCAGTAAAGAATGTCCTTTAGGATCAATTCGT
GATTACGATCGAAACTCATTAAAATCAAAATGTTGCTGGTCGTGTCAAGC
GTGTCCGAAAAATCACCGTGTCATGAATAATACGTGTCAGCCGTGTAAGC
AAGCCGAAGTTGTCGGACCACGGCTATGTTACACTGTTTGGTTTATTTGG
ACACAAAATGAAGCTGTTGTTATTCGGACCACTTCCGCCCGCGCGACAGG
GGAGTATTCCTACATGGTATATACCACGGGAACATTCGAAAAGTCTTTCA
AGTACTTATAGGCTATGTTACACTGTTTGGTTTATTTGGACACAAAATGA
AGCTGTTGTTATTCGGACCACTTCCGCCCGCGCGACAGGGGAGTATTCCT
ACATGGTATATACCACGGGAACATTCGAAAAGTCTTTCAAGTACTTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000243_pilon | genome | sc0000243_pilon:364123..367097 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1588-1725:139 |
| Aaloc | 25-1584:2463 |
| Aaloc | 1-21:2976 |
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