|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000243_pilon:159408..165900+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007689 ID=XLOC_007689|Name=XLOC_007689|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6493bp|location=Sequence derived from alignment at sc0000243_pilon:159408..165900+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGTTCGGAAACGATCCAGTGGCTTGTTTGTTTTCCAAAGATTGGAAGCA
TCGCGAATGTGGGTTGCGCTTTATCAGTAGAAAAGCTGTCAAAGTGTTGA
GCGAGAAGAGGACCACCGTTTTGTATCGAGAAACAAAATGGGAGTTGTTG
TCCGTCTGTACCGCTGTGCTAGCTTACATCGTCTCCGACCCTGTTTATAA
TGTTTATGTTGCTGCATTGGTAAGTAATTGTATTTGCTTTTTATCATCGT
ACTCTCAAAATTAAGGACCTATTCCTTAGGACTTATTCAACAATAGTTGA
TACCATTAGATCGAACGTGGAATTCTAGGCAATAAAGTATACTTCAATAT
AGCTTTTACTCGATCGTACAAGGATTATGGTCATTTAAAGCATTTAAAGC
TAAAAAACTCGTCAGATTCAGTCTAGTAGACTGAATCTGGTGTCAACTCA
AACGGACTGAAAATATATTTAGTCATATGTCCGAGTGAGGGATATGTTCT
TAAGCTTCCAGTTAGTCTACTTTTCAAAACTTATCAAATTTACACACGCT
TATTGTGCATATTGTTCTAATTCTTGAGAGCACTCTGATCTCAATGTCAC
GAAACCTTTATCCCAACCTTTCTTTTTCGTTTGCGAAGTGTGCATTCCGC
GGGATTGTGATGAACGTTCGATATCAGACACAAGAAGAACTGAACACTCT
ACATTTAACCATCAAACCTGTCATCGAGAAAATACTCATCAAATGCTCCG
ATTCTAACAGGTACCTTGTATCTATTTTGCGTTTGCTTTAGAAGacattg
ttttcaatttttaatcaaCGTGGAGTATTTTAACTAAAGTACAAAGAATT
TATTATTAGGGGGATGTTCATTATAGTGAACTCTATCTACTTTTAAAATG
TGACACTTAACTTTGGGGTCACGACTACAGACTACTGTTTCCTTTTTCGG
TTCAGACGAGTAACCATCTTGTCGATGAAGATTTTGATGGAGTTTGTGAA
CGGAGAAACGGTGAGCATACAGAACCCTTCCAATAGCACCATcaacaaca
cacaacaacacaTGGACCTCATCGCCTCCTGCTTGAACCAAGAAGAGGAT
CAAACACAATGGCAGTGGTGGTTGGGAAGGTTGTCTTTCGTTCTTCTTCT
GTTCGATGAGCACCACAGTCAACTTTTATTAGCCTCAGAGAATCGAATCA
ACATGGCTTCTTCCCTCCCTGTTTCACCAAACTCTGACGTTGACCTTCGT
GAATTTTTTAACTCGTTAGCAGAAAACGTTCATAGTACCAATTTTACTTC
GAAGACATGTGAACGCATCTTGCTGTTGGCCAGGTTTTCAGCCAGGACTT
TGTCTTGCCCTCATCAAAAGGTTTGCGACTTCTTTCTTGAATGATGTTTA
TTATTTATCCTTTCAAATAGATTTTCAATACCAAGAATATTCAATGCGtt
ttttttGTTCACAGGTTCACAGACATGCTTTATTCTTGATGATCAAATGC
ATAGCCATTTCATCACAAGATTCTGTGCTGTACCCTTCCATCAAGCAGAT
AGTGTACGGATTGACATCCAACCATCAGAGCACGTTGTATCGACACCTCT
CTAACGAATCACAACGCGAACAAGCTGACATCCTCGACATTCTTGGTGAA
CATGGCGAAGAAAGAAACGAACAAAATACGACTGTTGTGGATGAAGGTTC
GTCGATGTACAGTAGtttttttGCTATCCCCATTACCTATTAGCTTAACC
AactgatgaattgaaaaaatctttttcctgACAATCAAAAGACCAAACAT
TTGATATCAAAAAACTAAAGTTTCTGTAACTTGATCTCTCTGTTTAGAAG
AGGAGCAACATTCATTACAACACCAGACACCCACTTCAGCAAGACTGCAA
GATGTTTCAACCACACATATAGCTTCTCCTTCCACCCCTGAAGTGCATTC
TCATCTCAGACCACCCACTTCATCATACGATCCCCCCTTGAAGTGTGTGC
GTGCGGTAGAAGACGAAGAGGCGGCCGCCATAGCGATTGCATTAGACCGC
TCACAACGTCGTCCCGAGAATGTGATTCCTGATCAGTTGATACCAACGGA
TGATTTGACCATCGTACACATTCAGCCTGAGGTATGTTTCCTTCCTCtta
atttattaaaatctaacACTTTTACCGTATTCGTATCATTCCATAACTAC
CTAGTTAGCTTCACATTCTGTACTTTTTGAAATTGCATTTGGTGATACTT
ATCAACTATATCTTTGATTAAAGGGGGATAAGAAATCGAAAGATGGAGAA
GTGTGCAAACCACGAAACGTGTATTTGGAGAAAATACATTGGAAGAAAGG
AGGTCTTGTTGGTACTGGTGCTTTCTCCTCGTGTTACGAAGTTATGGATT
TCAAAAGTGGTCGCATTATGGCTGTCAAACAGGTACTGACTCTATTTCTG
ACAACTTTTTCTAATCGTTctatattaagcagatattcgtcaagaaaaat
cggatatcgaaaattattcagtcgagcttgatgatattcgacGAAGCGAA
GCTGAGTATCATTGAATATCATTAAAGCCAGACTGAAtaatttcgatatc
cgatttttcatgttgaatatatggtttatcgttcaccaattagcagaaaa
gcattttaattttttccctaTTTAATTTAGTCTTTCTCTCTTTGAATGAC
ATTTCCGAACGTTTTACAATCTTATTTAAGgatgtcaatttcattgtttt
ttctcttttgttaaaaagaactttcttttatctgtttttatatatgtgac
atttaaatacttatttgatcaaaaactattttctttatgcTCGCTGCTAC
TACAGAAGGGATATTTTGCTACcgggcaggtccaaaatgcataaaacata
atgcatattgcataatgcatcataatgcacattgcataatgcataatgca
taatatttgaaaaatgtcagtGTTAGGGGCTGTAACAAgtagaatttgaa
agataatactttcaacaaaacaagaTATGACACTTTCTGCCaaaaaataa
agggtagaaagctgtaaatttgaaatttggatgttgaagaaaatccatga
tccattGAAAATGCTtatcgccattttgattttcatagttgtatttcaca
gaacatatagtgtagaaaaaacacgacaATATCTCCTCTGTATATAActt
ttctaacttgaaaacgcaaattttatagcaagatctttattcttattcag
agatcttttcgaacaattgctaatacaTTTCAACGGGTTTCCCCTCTCag
aaagcattaaccatgtgaatgctttttgtttgATAAGCCAATCCAGCCAA
tactttacaatttttttacattcgaatgtttatgtgttacctttttttaa
gaaagaagaagggggaaacctttctgatttgttgcatcttcttattattt
atgctggtggaaaacctttgttgttatgattcgaatgttttcactttcgt
tcggattcgaatagtaaatatcatgtctggggaaatccatctgattggaa
tgtttacttaagaaactcttctaaagaggttttcgcggttttagcctcta
caaaggagacttttgatgttttatgcattttgtacctacCGCTTTgctat
cggatatctaaaaatatttgacaGTGCGTTTTGCCTACAGGTGGACGATA
ACAATTAATATTTTACCACTCGAATAGATTGCGGatgaaaacttttattt
attaaAATGATGCTTAGTTCCATTGGCATCCCaaagtaaatttttgaaat
ctgaagAATGTACTTTCCCTTACACAGATTTCGTTTGTGCGGAACACAGA
GGAGGAGCAGGAGAAAGTCCATCAAATCGTGCTCGAAGAAATCTCTCTCC
TCCATCGCATCAAACACCCCAATATTGTCTCTTGTCTTGGTGCCACCCAA
CATCAAGCTCATTATAATCTATTCATGGAACTTATGCCTGGTAAGTCAAT
ATGGCTTAGACCGTTAAAAAACGTTCCTCCTGAAATTCTAGCGGTTTTCT
CATCTTAATAATCCTGCTCTGCATGTAGACGGACTTTTCGATATTCATAC
TCTCACATTGATTGGCATATTGATCTTTTTATTGACATTTAACAGGTGGG
TCCATCTCTAGTTTGTTGGGGAAGTTTGGTGCGTTCAGTGAAAGTGTGAC
GAAGAGTTACACGCAACAAATCTTGCAAGCGGTCACTTATCTTCATCAAG
ACCACACACTACATCGTGATCTGAAAGGCGCCAACCTTCTGGTGGATAGC
ACTGGACAGATCGTCAAGTTGAGTGATTTCGGCACGGCCGCTCGTTTGAT
GGCTAATGGGACAGGAACCAAAGAATTTTGTGGACAATTTCTGGGAACCA
TTCCCTTCATGTCACCTGAGGTATAATTtagtttcaattttaatttaacc
ATTGTCGATAACAATTAAGTCATGATAATTTCAGTTATTGGGACATGGGA
GCTCCTTTACATGGAAATCCTTCGATtaaaatttgatcatttttattctt
cttttgttggtgaacttctcaAGATTGCTCGTTCTACGTTATTTTTCGAG
GAATTGGAAATTAAAGCcaagtttttatacaaagaatgcgATGTCAAGGT
GCTGAAAACGCAAAGTTAGATTTTAGTCTTCGACGgttatagttcgtcat
tttttagaattttcaagatttcaactttctcaagattcactcgttcACCA
GCTCTTGCTATGAGCTGTCACGGGTGTACGGGGCTTCTCGAACCGGGTTC
Tagtctaattttttaaattctcattctttccccactctttccatcttatt
ctttgaactgtaaaatgtgtgtgagagtcacagggttggatagtggcaat
ccaatcccagttccttctcttctagtatgttttcttcaacgttgtggcag
aaacgtgtcaaaggtgtggaAACTTTGTttagtagaaagtatacttcttt
tctccTTGTTATTTTAGTTCATTTTATATTATTACgcgcgttttatactt
tcactaaacacatctttttactgtggtggtgtctaattaacactgcttgg
cctacctacacaatcctatttccatcatataggaggatattttcgtaaaa
ggccgaaatcctgtgtaggtcgaaaaccgAGGAACAGAttatgtgttttc
ttgaaatattttttgactcatatatattgagttacttctttctaTCTTAA
CTCATATTAAGTTGCTTTCTTCCTTATAGTCatattttagatcactagtt
ttgcattgatgggttttctatgtcatcatattttccttttcaactCCAAC
CTGATTTATTTTCTGTGAATgctcattctagatttttgtcgtaatttgta
ttgtctttttgttttgtgggtttctctttagtgtttccattttgagtagt
tgaaggttttatacttctagactatataatATATATGAATCACTTAGTGT
TAAGTACTAGCGTTGTGGATTAACCAAAATTGGGGTAAACTAGGGGAGAC
CGAATTGCCGAATTAGGGTTGTCGAAATTAGGGTTTTCCTAATTTTTCGA
TACCTCTTCTGTATGTAGGTATTGCGTGGCGAACATTATGGAAGAAAGTG
TGACGTGTGGAGTATCGGATGTTGTATCATTGAAATGGCCAGTGGCTGTC
CTCCATGGAGCGAACAACATGTCGATAATAATCTCGCTCTCCTGTTCAAG
GTATTTCCAAACAACTTTGCATTTATGATACTTCAAATAGACATTCAACA
CGATTTCTCGAAATTCCTTTCTGAGGCGAATATCGAAAATTTATgtattg
aaatgatttttttttctccaacaAAGCAAGGGAAAGTTTTTTATGTAGCA
TTAAAGCGAGACCTTGGAAAGTAAAATTGAAACtcaaatatctcaagatc
tagCCATGGGAACCCTACAAACTATACCTCTTCGAGACACAACTGCCTTA
AAAGTAAttcttttcctgaaaattttctcagaaatgctgacgtcagcata
aaaatttgcattttttgacattttgtccATTTTGGATATCTTCTCCTTAA
GCTCTATAAGATGGTACAATCAGTTTTTATCAATAAGAAACTTAAAAGGT
TGACTTTTGGGTAGATTAAAATGACCTTGCCCCCTTCAAGGCTCCATAGA
AAATCTCCCCAGCTTTGCAGAAACAGTTTCGAAGTCCAGAGAGACCACAT
AATGAGAAACTCACATATAATACTTGTCACGGTCAACCAAGACCGCCTCC
GGGCGTTGTGATTTTTTATGtgatttaattatatttttgtaaatttcagA
TTGCAAGCTCAACAACAGGACCACATATTCCATCCTCTCTGGGACCTGGT
ATGCGAGATTTAACGCTTCGTTGTTTGGAACTGAAAGAAGCCAACCGACC
GTCATCGGCTGAACTTCTTCAACATGCCGTCTTCAGGACATGA Coding sequence (CDS) from alignment at sc0000243_pilon:159408..165900+ >XLOC_007689 ID=XLOC_007689|Name=XLOC_007689|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4290bp|location=Sequence derived from alignment at sc0000243_pilon:159408..165900+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGTTCGGAAACGATCCAGTGGCTTGTTTGTTTTCCAAAGATTGGAAGCA
TCGCGAATGTGGGTTGCGCTTTATCAGTAGAAAAGCTGTCAAAGTGTTGA
GCGAGAAGAGGACCACCGTTTTGTATCGAGAAACAAAATGGGAGTTGTTG
TCCGTCTGTACCGCTGTGCTAGCTTACATCGTCTCCGACCCTGTTTATAA
TGTTTATGTTGCTGCATTGGTGTTCGGAAACGATCCAGTGGCTTGTTTGT
TTTCCAAAGATTGGAAGCATCGCGAATGTGGGTTGCGCTTTATCAGTAGA
AAAGCTGTCAAAGTGTTGAGCGAGAAGAGGACCACCGTTTTGTATCGAGA
AACAAAATGGGAGTTGTTGTCCGTCTGTACCGCTGTGCTAGCTTACATCG
TCTCCGACCCTGTTTATAATGTTTATGTTGCTGCATTGTGTGCATTCCGC
GGGATTGTGATGAACGTTCGATATCAGACACAAGAAGAACTGAACACTCT
ACATTTAACCATCAAACCTGTCATCGAGAAAATACTCATCAAATGCTCCG
ATTCTAACAGTGTGCATTCCGCGGGATTGTGATGAACGTTCGATATCAGA
CACAAGAAGAACTGAACACTCTACATTTAACCATCAAACCTGTCATCGAG
AAAATACTCATCAAATGCTCCGATTCTAACAGACGAGTAACCATCTTGTC
GATGAAGATTTTGATGGAGTTTGTGAACGGAGAAACGGTGAGCATACAGA
ACCCTTCCAATAGCACCATcaacaacacacaacaacacaTGGACCTCATC
GCCTCCTGCTTGAACCAAGAAGAGGATCAAACACAATGGCAGTGGTGGTT
GGGAAGGTTGTCTTTCGTTCTTCTTCTGTTCGATGAGCACCACAGTCAAC
TTTTATTAGCCTCAGAGAATCGAATCAACATGGCTTCTTCCCTCCCTGTT
TCACCAAACTCTGACGTTGACCTTCGTGAATTTTTTAACTCGTTAGCAGA
AAACGTTCATAGTACCAATTTTACTTCGAAGACATGTGAACGCATCTTGC
TGTTGGCCAGGTTTTCAGCCAGGACTTTGTCTTGCCCTCATCAAAAGACG
AGTAACCATCTTGTCGATGAAGATTTTGATGGAGTTTGTGAACGGAGAAA
CGGTGAGCATACAGAACCCTTCCAATAGCACCATcaacaacacacaacaa
cacaTGGACCTCATCGCCTCCTGCTTGAACCAAGAAGAGGATCAAACACA
ATGGCAGTGGTGGTTGGGAAGGTTGTCTTTCGTTCTTCTTCTGTTCGATG
AGCACCACAGTCAACTTTTATTAGCCTCAGAGAATCGAATCAACATGGCT
TCTTCCCTCCCTGTTTCACCAAACTCTGACGTTGACCTTCGTGAATTTTT
TAACTCGTTAGCAGAAAACGTTCATAGTACCAATTTTACTTCGAAGACAT
GTGAACGCATCTTGCTGTTGGCCAGGTTTTCAGCCAGGACTTTGTCTTGC
CCTCATCAAAAGGTTCACAGACATGCTTTATTCTTGATGATCAAATGCAT
AGCCATTTCATCACAAGATTCTGTGCTGTACCCTTCCATCAAGCAGATAG
TGTACGGATTGACATCCAACCATCAGAGCACGTTGTATCGACACCTCTCT
AACGAATCACAACGCGAACAAGCTGACATCCTCGACATTCTTGGTGAACA
TGGCGAAGAAAGAAACGAACAAAATACGACTGTTGTGGATGAAGGTTCAC
AGACATGCTTTATTCTTGATGATCAAATGCATAGCCATTTCATCACAAGA
TTCTGTGCTGTACCCTTCCATCAAGCAGATAGTGTACGGATTGACATCCA
ACCATCAGAGCACGTTGTATCGACACCTCTCTAACGAATCACAACGCGAA
CAAGCTGACATCCTCGACATTCTTGGTGAACATGGCGAAGAAAGAAACGA
ACAAAATACGACTGTTGTGGATGAAGAAGAGGAGCAACATTCATTACAAC
ACCAGACACCCACTTCAGCAAGACTGCAAGATGTTTCAACCACACATATA
GCTTCTCCTTCCACCCCTGAAGTGCATTCTCATCTCAGACCACCCACTTC
ATCATACGATCCCCCCTTGAAGTGTGTGCGTGCGGTAGAAGACGAAGAGG
CGGCCGCCATAGCGATTGCATTAGACCGCTCACAACGTCGTCCCGAGAAT
GTGATTCCTGATCAGTTGATACCAACGGATGATTTGACCATCGTACACAT
TCAGCCTGAGAAGAGGAGCAACATTCATTACAACACCAGACACCCACTTC
AGCAAGACTGCAAGATGTTTCAACCACACATATAGCTTCTCCTTCCACCC
CTGAAGTGCATTCTCATCTCAGACCACCCACTTCATCATACGATCCCCCC
TTGAAGTGTGTGCGTGCGGTAGAAGACGAAGAGGCGGCCGCCATAGCGAT
TGCATTAGACCGCTCACAACGTCGTCCCGAGAATGTGATTCCTGATCAGT
TGATACCAACGGATGATTTGACCATCGTACACATTCAGCCTGAGGGGGAT
AAGAAATCGAAAGATGGAGAAGTGTGCAAACCACGAAACGTGTATTTGGA
GAAAATACATTGGAAGAAAGGAGGTCTTGTTGGTACTGGTGCTTTCTCCT
CGTGTTACGAAGTTATGGATTTCAAAAGTGGTCGCATTATGGCTGTCAAA
CAGGGGGATAAGAAATCGAAAGATGGAGAAGTGTGCAAACCACGAAACGT
GTATTTGGAGAAAATACATTGGAAGAAAGGAGGTCTTGTTGGTACTGGTG
CTTTCTCCTCGTGTTACGAAGTTATGGATTTCAAAAGTGGTCGCATTATG
GCTGTCAAACAGATTTCGTTTGTGCGGAACACAGAGGAGGAGCAGGAGAA
AGTCCATCAAATCGTGCTCGAAGAAATCTCTCTCCTCCATCGCATCAAAC
ACCCCAATATTGTCTCTTGTCTTGGTGCCACCCAACATCAAGCTCATTAT
AATCTATTCATGGAACTTATGCCTGATTTCGTTTGTGCGGAACACAGAGG
AGGAGCAGGAGAAAGTCCATCAAATCGTGCTCGAAGAAATCTCTCTCCTC
CATCGCATCAAACACCCCAATATTGTCTCTTGTCTTGGTGCCACCCAACA
TCAAGCTCATTATAATCTATTCATGGAACTTATGCCTGGTGGGTCCATCT
CTAGTTTGTTGGGGAAGTTTGGTGCGTTCAGTGAAAGTGTGACGAAGAGT
TACACGCAACAAATCTTGCAAGCGGTCACTTATCTTCATCAAGACCACAC
ACTACATCGTGATCTGAAAGGCGCCAACCTTCTGGTGGATAGCACTGGAC
AGATCGTCAAGTTGAGTGATTTCGGCACGGCCGCTCGTTTGATGGCTAAT
GGGACAGGAACCAAAGAATTTTGTGGACAATTTCTGGGAACCATTCCCTT
CATGTCACCTGAGGTGGGTCCATCTCTAGTTTGTTGGGGAAGTTTGGTGC
GTTCAGTGAAAGTGTGACGAAGAGTTACACGCAACAAATCTTGCAAGCGG
TCACTTATCTTCATCAAGACCACACACTACATCGTGATCTGAAAGGCGCC
AACCTTCTGGTGGATAGCACTGGACAGATCGTCAAGTTGAGTGATTTCGG
CACGGCCGCTCGTTTGATGGCTAATGGGACAGGAACCAAAGAATTTTGTG
GACAATTTCTGGGAACCATTCCCTTCATGTCACCTGAGGTATTGCGTGGC
GAACATTATGGAAGAAAGTGTGACGTGTGGAGTATCGGATGTTGTATCAT
TGAAATGGCCAGTGGCTGTCCTCCATGGAGCGAACAACATGTCGATAATA
ATCTCGCTCTCCTGTTCAAGGTATTGCGTGGCGAACATTATGGAAGAAAG
TGTGACGTGTGGAGTATCGGATGTTGTATCATTGAAATGGCCAGTGGCTG
TCCTCCATGGAGCGAACAACATGTCGATAATAATCTCGCTCTCCTGTTCA
AGATTGCAAGCTCAACAACAGGACCACATATTCCATCCTCTCTGGGACCT
GGTATGCGAGATTTAACGCTTCGTTGTTTGGAACTGAAAGAAGCCAACCG
ACCGTCATCGGCTGAACTTCTTCAACATGCCGTCTTCAGGACATGAATTG
CAAGCTCAACAACAGGACCACATATTCCATCCTCTCTGGGACCTGGTATG
CGAGATTTAACGCTTCGTTGTTTGGAACTGAAAGAAGCCAACCGACCGTC
ATCGGCTGAACTTCTTCAACATGCCGTCTTCAGGACATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000243_pilon | genome | sc0000243_pilon:159408..165900 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2002-2145:6350 |
| Aaloc | 1870-2001:5619 |
| Aaloc | 1597-1869:4148 |
| Aaloc | 1432-1593:3828 |
| Aaloc | 1273-1431:2274 |
| Aaloc | 991-1272:1850 |
| Aaloc | 757-987:1465 |
| Aaloc | 343-756:957 |
| Aaloc | 220-339:639 |
| Aaloc | 1-219:1 |
|
