|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000308_pilon:258474..260341+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007586 ID=XLOC_007586|Name=XLOC_007586|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1868bp|location=Sequence derived from alignment at sc0000308_pilon:258474..260341+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAACAAAGCAGCAGATATTGATTCTGAATTCAATGGTAATGAGCA
AACCGGAACTGAAGTCATCGACAACAACTCTGTTACACCAGAAGTTCTAG
CGAAACAACCCTGCCCTACACGAAAGAGAAGATATCAGTGGTATCAAATC
AATCCAGATGCTATCCCATCTAAATTAGCATATTTCTTCGAATGTGGACG
TCGAATAGGGTTTAATCCGAACTTAATCTTATTTTTCACAAGCATTGGAT
TGAATAAAGCTGAATCTGGATTCATTATCGGTCTCAGGTAAGAAATGTTC
TCTTATTGATTTCAGTTTTTTGGTCAGATATGAACATCCTGATGAAAGgc
ttatttgtttgtttttttggaatttcggTTCTTGCTTAGACGATTTGACG
GTATTTGGGAAAACAATTGACGGGATGGTGTAGCCCCCCTGAAGCCCCTC
GAAAAAGTCTATAACAAGAAATCAATCAAGTATTTTGCCGATCTGGTGGA
TGAACTAAATATATATAGGATTGACGGGTAACCTCACCTTttgttttatg
actttttgcaTGTTTTATGGTAATTCGATATAATTCTATTCTTTCGTATT
ACAGGATGATTGGTATGATACTTGGGGCACCATTCTGGGGATTGATCGCC
GACAAATGGCAATGTCACCGAACGGTCATCATTCTAATGACTATATCAAC
ACTTCTGGCAATCACTACTCAACCCTTCATCAGTGTTTTTTACGGAGATC
CTGATATGAATCAATGTCCTTATCAAAAGATTAACACTAAATCAACGACA
CTAAATAACTCAATCGAGCTATTATCGAACTGTAAAACATGCTACAACTC
GACTTTCTCAAATAACTCTAAATCCTATCTATCAAATGTGGAAAATACTC
AAAACAATACACCAGAGAGATTTGGGGCCTTATTTTTAGCTATGTTTTCC
ATCAGTCTTTGGTTATCATTCGCGGAAGGAAGCTCAATAGCTTTCATCGA
CACGGGAACGTTACGCCGTAGCCAGTTATCAACGCAACGTAAATTCGTTT
ACGGTCATCAACGTATGTTCTCTGCCATCGGCGGCGCTGTTGGAATCTTT
ACGGCAAACTTAGCGGTAGATTATTTCCCGCAAGCAGCCATAACCTGCTA
CACTGGCATTTTCGGCGTATACGCATTTTATACCATATTTTATGCACTGT
TCACTATCATTTTGTACCGTGGCTTAACCTTCAAAGAGGTGTCTAGCAAC
CAGGGTAGTAACATGGAAAACAAAACTACTAACGGCACTGAAAATCCGTC
CTCAGGTATTGAACATCAGGGAGATAACCATACTTGTGGAGATAACAAAA
CAatcaaagacaaaaagaagCTACACCGTATCTTGATTCAATCTCTACGG
AAACCCGACGTTATTTTCCTATACGTGACAACATTTGTAAGTGGTTTGGT
ATACTCACAACACACAAGTTTCCTCTATGTTTACCTAAAGGAATTAGACG
CTCCATCAATACTGTTAACCCTCTCAataattttctcaaacatttcttca
atttttggctttttctttGCGCAGAAAGTAATCAATTTATTAGGCGGAAC
ATGGCGCACCATCCCGGTGACTTTCGCTTTTTATTTCATCCGATATTGCG
GTGTTGGTCTTATTAAAAACCCATGGcttgttttgatctttcaacCTCTA
CACGCTGTAACCGCTACACTGTATGTCGCAAATGGATTAACTTATCTGAA
AGAAACCAGCCCCTTGCCAGTCATTACAACCCTGGTTTCCCTATTCAATA
CAACTCATTATGGACTTGGAACCATAGTTGGATCAAGTTTGAGTGGATTA
GTTTACGAAAAATACGGT Coding sequence (CDS) from alignment at sc0000308_pilon:258474..260341+ >XLOC_007586 ID=XLOC_007586|Name=XLOC_007586|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3102bp|location=Sequence derived from alignment at sc0000308_pilon:258474..260341+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAACAAAGCAGCAGATATTGATTCTGAATTCAATGGTAATGAGCA
AACCGGAACTGAAGTCATCGACAACAACTCTGTTACACCAGAAGTTCTAG
CGAAACAACCCTGCCCTACACGAAAGAGAAGATATCAGTGGTATCAAATC
AATCCAGATGCTATCCCATCTAAATTAGCATATTTCTTCGAATGTGGACG
TCGAATAGGGTTTAATCCGAACTTAATCTTATTTTTCACAAGCATTGGAT
TGAATAAAGCTGAATCTGGATTCATTATCGGTCTCAGATGGATAACAAAG
CAGCAGATATTGATTCTGAATTCAATGGTAATGAGCAAACCGGAACTGAA
GTCATCGACAACAACTCTGTTACACCAGAAGTTCTAGCGAAACAACCCTG
CCCTACACGAAAGAGAAGATATCAGTGGTATCAAATCAATCCAGATGCTA
TCCCATCTAAATTAGCATATTTCTTCGAATGTGGACGTCGAATAGGGTTT
AATCCGAACTTAATCTTATTTTTCACAAGCATTGGATTGAATAAAGCTGA
ATCTGGATTCATTATCGGTCTCAGGATGATTGGTATGATACTTGGGGCAC
CATTCTGGGGATTGATCGCCGACAAATGGCAATGTCACCGAACGGTCATC
ATTCTAATGACTATATCAACACTTCTGGCAATCACTACTCAACCCTTCAT
CAGTGTTTTTTACGGAGATCCTGATATGAATCAATGTCCTTATCAAAAGA
TTAACACTAAATCAACGACACTAAATAACTCAATCGAGCTATTATCGAAC
TGTAAAACATGCTACAACTCGACTTTCTCAAATAACTCTAAATCCTATCT
ATCAAATGTGGAAAATACTCAAAACAATACACCAGAGAGATTTGGGGCCT
TATTTTTAGCTATGTTTTCCATCAGTCTTTGGTTATCATTCGCGGAAGGA
AGCTCAATAGCTTTCATCGACACGGGAACGTTACGCCGTAGCCAGTTATC
AACGCAACGTAAATTCGTTTACGGTCATCAACGTATGTTCTCTGCCATCG
GCGGCGCTGTTGGAATCTTTACGGCAAACTTAGCGGTAGATTATTTCCCG
CAAGCAGCCATAACCTGCTACACTGGCATTTTCGGCGTATACGCATTTTA
TACCATATTTTATGCACTGTTCACTATCATTTTGTACCGTGGCTTAACCT
TCAAAGAGGTGTCTAGCAACCAGGGTAGTAACATGGAAAACAAAACTACT
AACGGCACTGAAAATCCGTCCTCAGGTATTGAACATCAGGGAGATAACCA
TACTTGTGGAGATAACAAAACAatcaaagacaaaaagaagCTACACCGTA
TCTTGATTCAATCTCTACGGAAACCCGACGTTATTTTCCTATACGTGACA
ACATTTGTAAGTGGTTTGGTATACTCACAACACACAAGTTTCCTCTATGT
TTACCTAAAGGAATTAGACGCTCCATCAATACTGTTAACCCTCTCAataa
ttttctcaaacatttcttcaatttttggctttttctttGCGCAGAAAGTA
ATCAATTTATTAGGCGGAACATGGCGCACCATCCCGGTGACTTTCGCTTT
TTATTTCATCCGATATTGCGGTGTTGGTCTTATTAAAAACCCATGGcttg
ttttgatctttcaacCTCTACACGCTGTAACCGCTACACTGTATGTCGCA
AATGGATTAACTTATCTGAAAGAAACCAGCCCCTTGCCAGTCATTACAAC
CCTGGTTTCCCTATTCAATACAACTCATTATGGACTTGGAACCATAGTTG
GATCAAGTTTGAGTGGATTAGTTTACGAAAAATACGGTGATGATTGGTAT
GATACTTGGGGCACCATTCTGGGGATTGATCGCCGACAAATGGCAATGTC
ACCGAACGGTCATCATTCTAATGACTATATCAACACTTCTGGCAATCACT
ACTCAACCCTTCATCAGTGTTTTTTACGGAGATCCTGATATGAATCAATG
TCCTTATCAAAAGATTAACACTAAATCAACGACACTAAATAACTCAATCG
AGCTATTATCGAACTGTAAAACATGCTACAACTCGACTTTCTCAAATAAC
TCTAAATCCTATCTATCAAATGTGGAAAATACTCAAAACAATACACCAGA
GAGATTTGGGGCCTTATTTTTAGCTATGTTTTCCATCAGTCTTTGGTTAT
CATTCGCGGAAGGAAGCTCAATAGCTTTCATCGACACGGGAACGTTACGC
CGTAGCCAGTTATCAACGCAACGTAAATTCGTTTACGGTCATCAACGTAT
GTTCTCTGCCATCGGCGGCGCTGTTGGAATCTTTACGGCAAACTTAGCGG
TAGATTATTTCCCGCAAGCAGCCATAACCTGCTACACTGGCATTTTCGGC
GTATACGCATTTTATACCATATTTTATGCACTGTTCACTATCATTTTGTA
CCGTGGCTTAACCTTCAAAGAGGTGTCTAGCAACCAGGGTAGTAACATGG
AAAACAAAACTACTAACGGCACTGAAAATCCGTCCTCAGGTATTGAACAT
CAGGGAGATAACCATACTTGTGGAGATAACAAAACAatcaaagacaaaaa
gaagCTACACCGTATCTTGATTCAATCTCTACGGAAACCCGACGTTATTT
TCCTATACGTGACAACATTTGTAAGTGGTTTGGTATACTCACAACACACA
AGTTTCCTCTATGTTTACCTAAAGGAATTAGACGCTCCATCAATACTGTT
AACCCTCTCAataattttctcaaacatttcttcaatttttggctttttct
ttGCGCAGAAAGTAATCAATTTATTAGGCGGAACATGGCGCACCATCCCG
GTGACTTTCGCTTTTTATTTCATCCGATATTGCGGTGTTGGTCTTATTAA
AAACCCATGGcttgttttgatctttcaacCTCTACACGCTGTAACCGCTA
CACTGTATGTCGCAAATGGATTAACTTATCTGAAAGAAACCAGCCCCTTG
CCAGTCATTACAACCCTGGTTTCCCTATTCAATACAACTCATTATGGACT
TGGAACCATAGTTGGATCAAGTTTGAGTGGATTAGTTTACGAAAAATACG
GT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000308_pilon | genome | sc0000308_pilon:258474..260341 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 289-1551:606 |
| Aaloc | 1-285:1 |
|
