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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000308_pilon:69950..73698+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007576 ID=XLOC_007576|Name=XLOC_007576|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3749bp|location=Sequence derived from alignment at sc0000308_pilon:69950..73698+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGGCTACTTCTAAAGAGCAGATACACCAAGAGGAAGAGCATGTTAGAGT
TCGCAACGAGTTAGATGTAGATCCATCGAAATGCTCTATATGTTTGTTTC
CGTtacccaaattttcaaattcgaatAAATGCAAACAATGTTTGGAGAAG
ATTGAAGCAATACCAACTGGTTTTCAATTTGAAGTTGCCGGAACCGAGCG
AAAAGAGTTTGAATGTCCAATTTGTCTTTGCATCATTCGAAATGCGACCG
AGTTACCTTGTGAACATTTGATGTGTAAAGATTGCTTGGAGCATTACGAA
AAAGGACAAATCGACAAATCAGAAAGGTATAAAAAGtgcattttatcaaa
ataacataCACTACATTTTCCTCTTGACCCGAACAATCACCTGCAAAGTT
CAATACCAAAATGCAAGAAATTCAACAGTTTATTTAGCATACAATTATTC
GAATCAAAATCGGGCTAATAGTTGACATCCTTcaattctattttatttat
tttgatgtctatataaagaaaaaagaatggaaAATCGTATTGTATTGATT
TATCTGTACAACATTTCTCTTGTATTTACAGGGAAGGGCGTGAGAAGGCG
GAATTTAGTTGCAGTGTTTGTATGACTCCGTACCAAGTGAAGGAGGTATA
GTCTTCTTATTCTCCCCAGTTTCCTGAAATGATTCAAAAGGACTAGGTCC
AAGCTAAAAAATTTCTCTATGGTCAACAAATAGTTATATCTGTACTCACT
CGAAAAGAAGCTAATTTGCGTCCGTAAAATAACGGATATTTACACCAAAT
CATTTTCTACGACCCCTGTGTCTAACGGCGATCACAAAATGCACTCTACG
CCCCCTATCACagacccaggggggggggctctagTTGCTATTATGCAATA
TGTCCATTGCATTATCCATTATGTGAAAACCACTTTTAAGGTAGTTTGTC
TAATTATGCTGACTTGGTTTCCATCCACATGGTAGCAAAGAAGAGTTCAC
TCTTAAAACAAATGGACTTTTAACCAAAGATATTATAAAAAGGATAATTA
TTTGTTTTCACAGAAAACACCAGTGCGCTCAACAGATCGTATGATTCAAA
CAACACTTCCAATCAAGTGTTTACAAAAGAACTGCGTTTGGACTGGTTGT
ATTATGGATTATGAGGTAAGCGCAAGTTTCATCAAGTTCATCAAAGGGAG
ACATGACAATCAGGCCGGTACCTTTTGATTTCATTAtaattttgagaata
tttttgaacttcAGCCCTATTCAAGGTCCTTAAATTTTCCAGAAACCTCA
AGTCACACACCTTTCTATCAGTCGGCAAATAGTAAAATACCTCAGATCAA
AGCGGTTCATAGTTATGAATGTAAATCATGGTTTGATTCAAAGGGTTCGA
AAGCAAACTTTGTTCCCTATCAATCGTTGTATCAACAATAAAGTAATTCT
GACGATGTGTCCTCAATCATTTTTTCGTTATAGGAGCACCAAAACAGACA
TTGCAATTTTGTGGTAATACGTTGTCCGTATTATGATTTGGGTTGTCTCA
CTCAAGTACGTATTATTTCTTCACCTCTATGATTCCGCGAGTCCCCTCTT
AATTTTTAAAAGACGGTTATGTAAAATGCGTAATTCGATCTTTGAAACTT
ACCGCAACCGGAGCTATCATCATATAAAACAAccaaataccgggtgcgcc
acaaaaaagtttctctcttttaaactaattttctcgaaatctaaaagttt
taaaagaaccattcctatttcattagaaagaagaaagataaacttaaatt
ttgatgggtcatttattgaatttgattcatcagatcaaaagttatgctca
attgaataaaaaagttactttcggaaaatgctcaaaaacgttaaaaatcg
acctatcaaattaaacagaagcataatcacatgatatatcagtattttcg
tttcagtcatcaaaagtgataattagctgtctaaatgaccttaaAGGAat
tatttaaaggaaggttgaatttcaatgaaaggaagaaaattcgtcgaaaa
aggccaaataatctggtaaaattttaaaaatacatcaaatatgggtttcg
aggtagattcagccttacatagactttatccagtctagaaccaaaattct
gaggaaaatttcggtaaaactaaattaaattgattttaatgaagattttt
aaccctttcgacccttgagtttcaaaatttatgtgttttgttactgaaaa
atgctcttaatcatgtaaagcctatTGCGACTGCTagttttataataaaa
ttttgataggtcgatttttaacgtttttgggcactttctgaaagtaactt
ttttattcaattgagcataacttttgatctaatgaaccgaatttatcaaa
tgacccatcaacatttaagtttatctttcttctttccaatggaataggaa
tgattttttttaaatttttcgatttcgagaaaatcagtttcaaagagaga
aacttttttgtggcgcacccggtagaagcCTTCATTTTGTCGAGGTTTCC
TTTAAGGTTTGGGGAACACTGAGAAATTGTGAATAGGTGAGTTATCTTAT
TAAGACTACAATAAACTCAAGTAGTTtaaattcgatcttcaagagacttt
tctttgaattggaaaaagattcgaattacagagagcaTTTTACATTCCTG
CCGAGGTGACCAATAATTTAGTTCGAAttgtagaaagattcgaattgtag
aggttcgaattagagagagttataTGTGTACTTTTCACTTTACAGATGGA
GCGAGCGAAACTACCAGTGCATAATCAAGCAAAGCGTCCCATACACGATT
CGCTCCTTCTAACGGCTGTTAGTGCGTTTACAATCGAACGAAAGGGTTTC
AAACTCAAGATGGACGAGCAAAACCGGAAGATTGAGAGCTTACAAGGTCT
TTACGAGACCACGATAAAAAGAtgtgaaaatctagaaaaagaTAATCTGC
AACTGAAACAAAGAGTTCAAAGACAAGATGAGGCGATCAGGGATATCAAA
AGCTCCTTATTTGAAATGCAAGGCAACGTTGATAGCAGTAGTGATTTAGA
TTCGTTGAAGAAAGACTTGGGAAATCAAAGCAAAGAAGTAAAGAATCTGA
AGACATTTGCCGAACAAACTAGTAGACTGCACAAAACATTTAGCCATCCA
GATATCCAAGATGTTTTCACATATCTCCTTCCAGACCAATATGAAGCAAA
TAACGAAATTAAACAGTGGAAACTCTTGACCGAAGAAGTTACAGCAAAAC
CAATAGATCAGGATTGTGAATATCTGAAAACATTGAAAGACTCGATAGTT
CGGTACCAGGGTACAATATACCCGGCAAAATGGAAAACGAGACTAACGAA
GTGGCGAAAATATATTGACTATGGGGTCAACGTGTGCTGTTAtgtgaaat
tatttttgtataagAATAGTAGAAAGTTTTCactgaaagttttcaaaaca
acaGACGAATTTGATCGAACAGTGGCCAAAAGCAACAAATGGTGCAAACA
TTCGAATGACACTGCAAGCTATTTTGACTGGAAGCAACTAATTCTTTATG
TAGCGATATTTGCAAAGGATTTTGAAGATGCTTATATTGTAAATTGGGAA
GATGTTAACGATACTAAAAGTGTTGCCACCGATGGAAGGATCGTTCCTGT
GGAAGAAGCATTCGTCTCAAACGGCTATATTATTTTCTCAATTCTTTGA Coding sequence (CDS) from alignment at sc0000308_pilon:69950..73698+ >XLOC_007576 ID=XLOC_007576|Name=XLOC_007576|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3036bp|location=Sequence derived from alignment at sc0000308_pilon:69950..73698+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGGCTACTTCTAAAGAGCAGATACACCAAGAGGAAGAGCATGTTAGAGT
TCGCAACGAGTTAGATGTAGATCCATCGAAATGCTCTATATGTTTGTTTC
CGTtacccaaattttcaaattcgaatAAATGCAAACAATGTTTGGAGAAG
ATTGAAGCAATACCAACTGGTTTTCAATTTGAAGTTGCCGGAACCGAGCG
AAAAGAGTTTGAATGTCCAATTTGTCTTTGCATCATTCGAAATGCGACCG
AGTTACCTTGTGAACATTTGATGTGTAAAGATTGCTTGGAGCATTACGAA
AAAGGACAAATCGACAAATCAGAAAGaTGGCTACTTCTAAAGAGCAGATA
CACCAAGAGGAAGAGCATGTTAGAGTTCGCAACGAGTTAGATGTAGATCC
ATCGAAATGCTCTATATGTTTGTTTCCGTtacccaaattttcaaattcga
atAAATGCAAACAATGTTTGGAGAAGATTGAAGCAATACCAACTGGTTTT
CAATTTGAAGTTGCCGGAACCGAGCGAAAAGAGTTTGAATGTCCAATTTG
TCTTTGCATCATTCGAAATGCGACCGAGTTACCTTGTGAACATTTGATGT
GTAAAGATTGCTTGGAGCATTACGAAAAAGGACAAATCGACAAATCAGAA
AGGGAAGGGCGTGAGAAGGCGGAATTTAGTTGCAGTGTTTGTATGACTCC
GTACCAAGTGAAGGAGGGAAGGGCGTGAGAAGGCGGAATTTAGTTGCAGT
GTTTGTATGACTCCGTACCAAGTGAAGGAGAAAACACCAGTGCGCTCAAC
AGATCGTATGATTCAAACAACACTTCCAATCAAGTGTTTACAAAAGAACT
GCGTTTGGACTGGTTGTATTATGGATTATGAGAAAACACCAGTGCGCTCA
ACAGATCGTATGATTCAAACAACACTTCCAATCAAGTGTTTACAAAAGAA
CTGCGTTTGGACTGGTTGTATTATGGATTATGAGGAGCACCAAAACAGAC
ATTGCAATTTTGTGGTAATACGTTGTCCGTATTATGATTTGGGTTGTCTC
ACTCAAGAGCACCAAAACAGACATTGCAATTTTGTGGTAATACGTTGTCC
GTATTATGATTTGGGTTGTCTCACTCAAATGGAGCGAGCGAAACTACCAG
TGCATAATCAAGCAAAGCGTCCCATACACGATTCGCTCCTTCTAACGGCT
GTTAGTGCGTTTACAATCGAACGAAAGGGTTTCAAACTCAAGATGGACGA
GCAAAACCGGAAGATTGAGAGCTTACAAGGTCTTTACGAGACCACGATAA
AAAGAtgtgaaaatctagaaaaagaTAATCTGCAACTGAAACAAAGAGTT
CAAAGACAAGATGAGGCGATCAGGGATATCAAAAGCTCCTTATTTGAAAT
GCAAGGCAACGTTGATAGCAGTAGTGATTTAGATTCGTTGAAGAAAGACT
TGGGAAATCAAAGCAAAGAAGTAAAGAATCTGAAGACATTTGCCGAACAA
ACTAGTAGACTGCACAAAACATTTAGCCATCCAGATATCCAAGATGTTTT
CACATATCTCCTTCCAGACCAATATGAAGCAAATAACGAAATTAAACAGT
GGAAACTCTTGACCGAAGAAGTTACAGCAAAACCAATAGATCAGGATTGT
GAATATCTGAAAACATTGAAAGACTCGATAGTTCGGTACCAGGGTACAAT
ATACCCGGCAAAATGGAAAACGAGACTAACGAAGTGGCGAAAATATATTG
ACTATGGGGTCAACGTGTGCTGTTAtgtgaaattatttttgtataagAAT
AGTAGAAAGTTTTCactgaaagttttcaaaacaacaGACGAATTTGATCG
AACAGTGGCCAAAAGCAACAAATGGTGCAAACATTCGAATGACACTGCAA
GCTATTTTGACTGGAAGCAACTAATTCTTTATGTAGCGATATTTGCAAAG
GATTTTGAAGATGCTTATATTGTAAATTGGGAAGATGTTAACGATACTAA
AAGTGTTGCCACCGATGGAAGGATCGTTCCTGTGGAAGAAGCATTCGTCT
CAAACGGCTATATTATTTTCTCAATTCTTTGAATGGAGCGAGCGAAACTA
CCAGTGCATAATCAAGCAAAGCGTCCCATACACGATTCGCTCCTTCTAAC
GGCTGTTAGTGCGTTTACAATCGAACGAAAGGGTTTCAAACTCAAGATGG
ACGAGCAAAACCGGAAGATTGAGAGCTTACAAGGTCTTTACGAGACCACG
ATAAAAAGAtgtgaaaatctagaaaaagaTAATCTGCAACTGAAACAAAG
AGTTCAAAGACAAGATGAGGCGATCAGGGATATCAAAAGCTCCTTATTTG
AAATGCAAGGCAACGTTGATAGCAGTAGTGATTTAGATTCGTTGAAGAAA
GACTTGGGAAATCAAAGCAAAGAAGTAAAGAATCTGAAGACATTTGCCGA
ACAAACTAGTAGACTGCACAAAACATTTAGCCATCCAGATATCCAAGATG
TTTTCACATATCTCCTTCCAGACCAATATGAAGCAAATAACGAAATTAAA
CAGTGGAAACTCTTGACCGAAGAAGTTACAGCAAAACCAATAGATCAGGA
TTGTGAATATCTGAAAACATTGAAAGACTCGATAGTTCGGTACCAGGGTA
CAATATACCCGGCAAAATGGAAAACGAGACTAACGAAGTGGCGAAAATAT
ATTGACTATGGGGTCAACGTGTGCTGTTAtgtgaaattatttttgtataa
gAATAGTAGAAAGTTTTCactgaaagttttcaaaacaacaGACGAATTTG
ATCGAACAGTGGCCAAAAGCAACAAATGGTGCAAACATTCGAATGACACT
GCAAGCTATTTTGACTGGAAGCAACTAATTCTTTATGTAGCGATATTTGC
AAAGGATTTTGAAGATGCTTATATTGTAAATTGGGAAGATGTTAACGATA
CTAAAAGTGTTGCCACCGATGGAAGGATCGTTCCTGTGGAAGAAGCATTC
GTCTCAAACGGCTATATTATTTTCTCAATTCTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000308_pilon | genome | sc0000308_pilon:69950..73698 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 565-1518:2796 |
| Aaloc | 493-564:1484 |
| Aaloc | 391-492:1064 |
| Aaloc | 328-390:583 |
| Aaloc | 1-324:1 |
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