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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000308_pilon:63101..67330+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007575 ID=XLOC_007575|Name=XLOC_007575|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4230bp|location=Sequence derived from alignment at sc0000308_pilon:63101..67330+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTCCGGTCTCTTTTACAGCGGTTGACGACCCAACACAGAATCCAGAACG
ACCGAAAGGGTTTTTATGGTTAAAGCTTGAGAAGACGATTGAAGTATGGA
AAAATTTATGTTATTAAAGGCTGACGAGCGATGGAGGTAATAGAGCCGAA
acggtacttaggcaaatggagggtacgggtatgtgccacccttgagggta
ccttttttggacctcCAAAGTTCCACTAAGGgctggaaaaatcagaaaat
taaatttcagccccactaagggtcgagaagataagaaaatttcaactttt
tgcccctaaAAATGGAAGGGTTCTATTCTAGTATAATGAAAACTGTAAAT
ACGGACAAGCTCCCTCCCCCTTTCCCCcatttggaatattttttaaagga
aaaaagtgAGGTGTACTCACTAAAACAATCGTCTCGCATgcaatttttat
ttacaaaaagtgcatttttctcgtccggaaagggttaaataCCAAGTATA
TGTTTTTTGTATGtatgtttttctgcgacggagacagtaaggttctaatt
tgtctacatcctgactgactgaggacgacggtaaatcagcacttttaccg
tcctcgattttttttccaaatcgcttcagtcacttaccgtcctcaaaagt
gcaaatacataaactggCTAGTGACAGTAGACATAAAATACCAGATataa
tatttctattttgtcatAACAATAATccataatatttctttttcttttat
tgggGTAGTAATTCACTATCTCTCACAGCTGGCAGTACTAGATGTTATCA
TTGATCAAATCGGAAAGCCAGCTTTCTTAAAGCAATTCAACGATCAAATG
CATGgagcaaaaagtgaaaaaaagtacACGATATGTAGTGAACGTACGGG
GCCTGCTCTTAACGTTTCTATCACAAGGCACAAGCTGTTCCAAAAGATTC
CTTGTCTTGAGAAGATCCTTCGTGAGCCTGAAAAGTTATTAGATGCCGAC
TTCACATTAGCATTGGCATGTCCAAAGTTCCCACGTGATGGAAAATGTAA
GTTTCTTTGATGATATCTTCATGTCTGTTTGCTCTTAGAACCAGCTGTAA
TAAAAATGCCCTTATTTTTCAAAGGGTAAATTTACTTTATCATCAAGTCA
TCTGAACAATTAAAGTTATAGAACAATATTGCCCTTGAATGATATGAGCT
CGCTCGCTGAATAAGTTACTGTACCAGtgggttgaaaaatttttgatgac
gaagAACTTGAAACTTgaataattttcctaaaaatcaataaagataaact
ggtttttttacctaatggtattttttattatatttgtaGATTTCTTCGAA
CGTAGAGAAGAAAACGAGAAGATTCATTGGCCTGGGAGAGAGGTTGTCAA
TAAGATCGAACAACTCGGTTGCCATGTGGTACCTAAACCTTCAAAAAAGA
CGCTAGCCTCCTTTCAAAAAGGTAagctttgtcaatttttacaatcaaaa
TTTGTTCTCGAAGCCAACAACGAGAATAAGGAAGCAATTTGTCTCATCTA
TGTTCTAGAAtaattaaaacctttaaagccGAGAGCAGCTATGACCTAAA
GACTATTATCATGATAGTAATTTGCAAACCTTTTGATACCAGGGGGTCAG
CTCTAAAAcctggggggtactaggttgCGAGATGATAGGTATGTCTGACT
GAAGCTCAAAAGtagacccttagagagagattgaatttcgaaaatttgtc
cattttttgacgtttttgccaccctatttccacaaaatttcagccaaaat
ctataaattttagtccaaatttcaagaatttatgttTAGGATTTATATAT
GATTTTggaacccttagagagactcaattgctttttaatgattACCCCTT
TGAAGAACTTTCGAGGGTGTGCGGGTCCCTTCCTTATGGTTCGAATTTTT
CCCAAAAGTGCAATTATTTGCaacataaaattcatttttggtactttatt
gatttaattctataccttatcggcccttttaacgccggcccttattggcg
ttatttttgggctcgtggcgtaataaaggtcggtgttaaaagggccggcg
taGAAAGGGccaaaactttgcaatttttacctaaaagagGCGTtaatttt
tgcatattttttctcaatttaaaggatttcaGGCATTATTAAAGGATAAA
AGCTACCCAtttttttAACTCTATATCCAaaacttcacgaaaatcaatga
ttttcaatggaattttcgaCAGTTTAATACTAAAAGACGacatttcaatt
taaattttagttaaaacttactgttttgaagcctgaatagtgatttttac
aagttttggcgttatttacggccctaattggcgtaagctcaaaattaggc
tgtggcggaacaagggccggcgtaaaaggggccggtgTTGAATTAGGGCC
GgagtaaaaagggccgataaggtattaacCTTTGACTGAAtgcaaaaatg
atttaaattaGATTAGAATGAGAACAAAGGGGTCCAGCGAAGATTAATAA
CTAGGGACATTTGTTCGGGACTTCAGAGTACCAATGTAACACTTCTTTGG
TTATCACTACCCCCTTGaactaaaaagattttaaagttttttgggTATAC
CATCACGTCCACTGCACAGGAACCCGTCGGCGTACTTAAATCTGTTGtat
tcatttcgccatcagtatataaagaagaaatcatagcatgatTCTCCAGG
CTACACGTCCAATTGTCAATGGAGATGCGAGCTTCCTGTTGATACATAAC
AAGAAATACCTTAAGAAAAGAAGTTTTTGCGAATGAGCCCATTTcgccaa
ttttggtgcaatttggtggaatttattttggcgaatcaataaaatttcta
gatttggcgaaaattaattttggcgaacgacccatttttgttcgatattt
tagctgaaaaaagagggaaaaaagggttttcaggagaaatagaaactaaa
ttgaaagaaaattaaatttagcgaaatttattttggcgaaatatttcttt
ccgccaaaatttcttcccttaaggtactacTTTTAATAAAAAGTTAATTG
TCAAGTTCTTCAGTGGGTTTAACGTGCGCTTAAGCCAACTATGAGCACCT
TCtcttttatctgatattccgaaaTCGGATTGGTGGCCGTCCACGCTAAA
GCACTCAAGGGTGCGAACCaattgacctttatatatcccggccggccaag
caaaatattataatcggattttttttgaaattggtacccgcggagagagc
gctagatctagtttcgcttgtacactaatgatgtagcgccgtttgtcgcc
aggcaaagtttcaaacactacagtaaaatggcttctttgcgggtaccaac
tttcaaaaaaagttcgatcaaagatggtgatatagcttggtccagggata
tataaaagtCAGTGGTGCGgaccaattgaaaattttcccatcCTTTAGAA
TTTTagcatgttggatgaaattttCTACATCTGAGTGCTAGAAAACCTCT
CAAATTATAATATTCCTTTTTCTTCTTATATAGAACAAATGGCAGATAGT
TTCCTGGGTACAAGTGCTGTTTTAGAATGGAGATATTCATTTTCACAAGC
TGAAATGGTGTTATCTGATCACGTCCCTCAAGCCATCAGAACCAGTTATC
TCGCATTCAAAGCTGTCATTAAAACACACATCAACCGTGTATTCGATGCT
GAGGGGTTACCTCACAAGATTCCATCGTATGCATTGAAAACCATCTTGTT
TTACGAATTGGAGAATATGCCGGTAAATTTCAATGCAAAAGAAATAGAGG
AGAAATTCTTTTGGATTTTATTCGAATCACTCCAACAGAAAATCGATTCG
AAAAAATGCCCTCATTATTGGATCAAAAGTTTGGATTTGTTTTCAGATAT
AAAGGAAATTGATTTCGAATTTATGAAAGATCGATTAAATCGAATCAAAC
AAAGACCGATCGAGTATATTGCATCCGAATGGCTCGAATGGAATCGGTAC
ATGCGACAACATTGTTGTGCGTCTTGCATCGAACCGTATAAATTGAAGAG
AAAAGTAGTCGGAGATGACTTTAAGCCGTTACCGTGTTGTTGTTTTGTGA
CTTTGAACATGAAGAGAGACAAGGATGATGAGGAAGAGGTAAAAATTGTA
TATGATGATGTTGCTATTGAGGTTTACTAA Coding sequence (CDS) from alignment at sc0000308_pilon:63101..67330+ >XLOC_007575 ID=XLOC_007575|Name=XLOC_007575|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2406bp|location=Sequence derived from alignment at sc0000308_pilon:63101..67330+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTCCGGTCTCTTTTACAGCGGTTGACGACCCAACACAGAATCCAGAACG
ACCGAAAGGGTTTTTATGGTTAAAGCTTGAGAAGACGATTGAAGTATGGA
AAAATTTATGTTATTAAAGGCTGACGAGCGATGGAGTTTCCGGTCTCTTT
TACAGCGGTTGACGACCCAACACAGAATCCAGAACGACCGAAAGGGTTTT
TATGGTTAAAGCTTGAGAAGACGATTGAAGTATGGAAAAATTTATGTTAT
TAAAGGCTGACGAGCGATGGAGTAATTCACTATCTCTCACAGCTGGCAGT
ACTAGATGTTATCATTGATCAAATCGGAAAGCCAGCTTTCTTAAAGCAAT
TCAACGATCAAATGCATGgagcaaaaagtgaaaaaaagtacACGATATGT
AGTGAACGTACGGGGCCTGCTCTTAACGTTTCTATCACAAGGCACAAGCT
GTTCCAAAAGATTCCTTGTCTTGAGAAGATCCTTCGTGAGCCTGAAAAGT
TATTAGATGCCGACTTCACATTAGCATTGGCATGTCCAAAGTTCCCACGT
GATGGAAAATTAATTCACTATCTCTCACAGCTGGCAGTACTAGATGTTAT
CATTGATCAAATCGGAAAGCCAGCTTTCTTAAAGCAATTCAACGATCAAA
TGCATGgagcaaaaagtgaaaaaaagtacACGATATGTAGTGAACGTACG
GGGCCTGCTCTTAACGTTTCTATCACAAGGCACAAGCTGTTCCAAAAGAT
TCCTTGTCTTGAGAAGATCCTTCGTGAGCCTGAAAAGTTATTAGATGCCG
ACTTCACATTAGCATTGGCATGTCCAAAGTTCCCACGTGATGGAAAATAT
TTCTTCGAACGTAGAGAAGAAAACGAGAAGATTCATTGGCCTGGGAGAGA
GGTTGTCAATAAGATCGAACAACTCGGTTGCCATGTGGTACCTAAACCTT
CAAAAAAGACGCTAGCCTCCTTTCAAAAAGATTTCTTCGAACGTAGAGAA
GAAAACGAGAAGATTCATTGGCCTGGGAGAGAGGTTGTCAATAAGATCGA
ACAACTCGGTTGCCATGTGGTACCTAAACCTTCAAAAAAGACGCTAGCCT
CCTTTCAAAAAGAACAAATGGCAGATAGTTTCCTGGGTACAAGTGCTGTT
TTAGAATGGAGATATTCATTTTCACAAGCTGAAATGGTGTTATCTGATCA
CGTCCCTCAAGCCATCAGAACCAGTTATCTCGCATTCAAAGCTGTCATTA
AAACACACATCAACCGTGTATTCGATGCTGAGGGGTTACCTCACAAGATT
CCATCGTATGCATTGAAAACCATCTTGTTTTACGAATTGGAGAATATGCC
GGTAAATTTCAATGCAAAAGAAATAGAGGAGAAATTCTTTTGGATTTTAT
TCGAATCACTCCAACAGAAAATCGATTCGAAAAAATGCCCTCATTATTGG
ATCAAAAGTTTGGATTTGTTTTCAGATATAAAGGAAATTGATTTCGAATT
TATGAAAGATCGATTAAATCGAATCAAACAAAGACCGATCGAGTATATTG
CATCCGAATGGCTCGAATGGAATCGGTACATGCGACAACATTGTTGTGCG
TCTTGCATCGAACCGTATAAATTGAAGAGAAAAGTAGTCGGAGATGACTT
TAAGCCGTTACCGTGTTGTTGTTTTGTGACTTTGAACATGAAGAGAGACA
AGGATGATGAGGAAGAGGTAAAAATTGTATATGATGATGTTGCTATTGAG
GTTTACTAAAACAAATGGCAGATAGTTTCCTGGGTACAAGTGCTGTTTTA
GAATGGAGATATTCATTTTCACAAGCTGAAATGGTGTTATCTGATCACGT
CCCTCAAGCCATCAGAACCAGTTATCTCGCATTCAAAGCTGTCATTAAAA
CACACATCAACCGTGTATTCGATGCTGAGGGGTTACCTCACAAGATTCCA
TCGTATGCATTGAAAACCATCTTGTTTTACGAATTGGAGAATATGCCGGT
AAATTTCAATGCAAAAGAAATAGAGGAGAAATTCTTTTGGATTTTATTCG
AATCACTCCAACAGAAAATCGATTCGAAAAAATGCCCTCATTATTGGATC
AAAAGTTTGGATTTGTTTTCAGATATAAAGGAAATTGATTTCGAATTTAT
GAAAGATCGATTAAATCGAATCAAACAAAGACCGATCGAGTATATTGCAT
CCGAATGGCTCGAATGGAATCGGTACATGCGACAACATTGTTGTGCGTCT
TGCATCGAACCGTATAAATTGAAGAGAAAAGTAGTCGGAGATGACTTTAA
GCCGTTACCGTGTTGTTGTTTTGTGACTTTGAACATGAAGAGAGACAAGG
ATGATGAGGAAGAGGTAAAAATTGTATATGATGATGTTGCTATTGAGGTT
TACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000308_pilon | genome | sc0000308_pilon:63101..67330 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 562-1206:3586 |
| Aaloc | 430-558:1342 |
| Aaloc | 142-426:761 |
| Aaloc | 4-138:1 |
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