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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000130_pilon:617069..621317- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007486 ID=XLOC_007486|Name=XLOC_007486|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4249bp|location=Sequence derived from alignment at sc0000130_pilon:617069..621317- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTGGATTTATTTCACCAAAATGGATATCAATGTCTGTCTTACTGT
TATGACTTCATGGCATCTGGCATATGGTCAAAGACTTCTGGTGTTTTACG
AAAATGTTATCTTTGATTACGATGGTCCAACTTTTAATGGTGACATTCGA
AATGATTATCGATTTTCGTCCAAAAATAAGACTTCTTTTATTCGATATCA
CGACGATACGTTAGAACATTGTCAAGACATTTGGCGAAATTTATCATTCA
ACTCTTTACAAAAAGATTATGACGGTATAATTTCTTTAACAAAGTCACAA
AACCTTTTGAGCAAACAACTTTCATCTTCAAATGAAGTATTGGATATATT
ATATCAATTTGAATCAACATTTAGTAGATTGGTAAGAAAACTTTTTTATG
GAAATCAAATTTCATCGACGTTTTAGATCACCTACACCATTTTTTATTGA
AAAACTTATGTTCTTCCCAAAAAGACTTTTCAGCCTTTCAGTACTACTTA
ATTTTAAAGCATCCACTGATCAGGTAGATTTCCCCCAAGTGGAATTTTTT
CACACCCCTGTGTCACAGACCCACTGGAAAGTTTGGCAAAGATTTCGTCC
CCGGTGGGAAAAAACCTTGCAATTTCAGCCCCACTTGGAGATTGACTTGA
TTTCGTCCCAATTCGAAATTCCACCCCACTGGATTTTTTAACCTTAGAAC
AATAGAATGTTAATCATCATTGGAATTTCAATAGGAATTTTTATCCCCAA
GGAGGAAAAAGTTCCACCGGGGCTGTGAGACAGGTTTTTTTCTCTCCGTT
ATCCTTGCTCTGCCTGCACTCTCGCTTTTTATTAATTTCCTTTTTAAGAC
TAAATTTTGACAATTTTTGGTCGAGTTGTTTGCCTTCTTCCTAAACCTTT
ATCTTTTTATTATCTCTGACATCAGCTGGTATTCTTGACTTTATCCTTCT
AGAAATATGAAACTTTCGTAAAAAATAGTGTATTTGCTACCAAAAAGCAT
TCCCCCTGAGTTATACTCATTTTATGACCTCTACAGAAATGGATGTTATC
AAACGATCGACAATACTATTCTTGTGTTTGGCTATCTCCTTTGTTTATCA
GCACAGTATCCGCAATATTCAACATTTTACGGACCAAAAACCTGGCTGTA
CTCATCGAAGATAACTACTGTTCGAATTTTTTAATGAGGGATATTCAAAC
ATCTTTACTGATGCTAAATGGTAATAAAACAAAGACTATTTTCAATCCTA
TTTATGTTGGTTTGGCGCCTCATCAAGAAGCGCGCAATCGTGATCAATTC
TATGATCTCTTGGTGGAGGGACAAACAGATTTCCTCATGCTTTTGCAACG
TGACCTACACAAACACGTGTTCAAAATGGCGGCATTTTTCAGTTTGTTGG
GACCACATCAACGTTGGTTGATACCAAATTTTGATCAAAATGAACCTTTA
GGGTTTGGTAATGTATTACCAGGACAGATATTATCTTTCCAGTTGAAGAC
AAATGACAATTTTGGTGTGACGAAGTTGTCCGATGTTGTTGGATGGATAT
CTGAAACCTTCCAACATTTTCGGTATGAAGACCATATTTTTGATTCCCTC
TCTTTCTCTAGATGATCCTATCGTCTAGAAAGACATTGTGACGTGCCGTG
GCACTCATAAGGTTCGAATTTCCAGGGTTGTTTTTTCATTTTTCCAAGGG
GGTTAAAAGTTATTCTAAAATTTTCAGAGGCAAAAGACTTATTTTACTTC
GTCCACCCTCACGTCCATTAAAAGAATTTTTCCAAGGATGTTTTAGCAAA
TTTTGCCATTTTCAAGGGGTATCGACACATTTTCAATAATTTTTTTCCAC
CCTCCTGTATGGTTTTTTAATGGAGCAGCCCAATGACGGCCCCATTTTGT
AATTTGTTATTTATGCTAGAAATGACCAATCACTGATCCACAAAAGTTCC
ATTCTGTACTCAACACTGATGAGAAGGATGTACCATTCCAATATCCAATA
TCGACAATCACCTTTAGAAATATTTTACTACAATGGTGAAAATCAAGGCG
AATGGCAATCCAACCAAGGATTTATGCGTGATAACAAGTTGACCTTTTAT
GGCGATGTATTGAATATTCTACGGTCTTCTGAAAGTAAGTGATAATTTTA
CTTACTAGTCTCTATATTTACCTTTCATCGCCTTAAAGCACACACAAATG
TTTCAACCAAAGTGAGTCATCTTAAAATTATTAAAGACAGTGTTTGATTC
AGTGTTGTAGAGTTTTCTGGGAAATTCTATTTGAATCTTTTTCCCCTTTC
TTCTTTGGCTTTTTTGTTTTGAATATTTTTCTTTTCTTTTCGCTCAGCAA
ATAGTCTTACAGATCGCATACGTATAGTCACAATAAACGATGCTCCGTAT
ACTTTCGTTGATGGCAAATTTTACGACGCCGATAATGATATGTGTTCCGA
TGGTTTCTTATGTCAAATTCCGATACAAACGGATAGTTCCGGGCAACTTA
ATTACCAAAAGTCTTGTTGTATCGGTTTCATACCGGATATTTTCCGCATG
GTCATAAAGAACGTTGCTATACCGTTCGAAATGTACGTTGTTGCGGACGG
GAAGTATGGCGGATTCAAGAACGGTACGTGGAATGGAATGATCGCGGATG
TTGCTTACGGGAAAGCGGACATGGCGATGGCTGCCATCACCATCACGAAA
GAACGGTCAGATTCTGTATCATTTAGCGCCCCATTCATGTTCGACCAAAC
GGGAATCATAACAAAACCAGCAGTGGTTGAACTGGATTTTTTGAATTGGG
AGTTTTTGGCGCCTCTTTCCAAAGAGCTTCAAATTTATCTAGTGATTTTG
GTTGTGGTTTGTATGCTGTTGCTTTACTTCTTTGAAAATACAATATACTT
TTACATTTATCACCACCATGGGTTCAGTCATAAAGCGTATTACTCATTCC
TCGAAGGACTTTCTCACATCTCTGGTGTAACTTTACAAAGAGATCTTGGC
GGGAAACATCCTTTATGCCCAGCCGCCCGTATCATGTGTTTGTTTTTCGC
TATTGGGATGGTAATCATTGTTTCGACTTACACAGCCGTTTTGGCAGCAC
AAAGTTTGAAGAGTAAAGAGAGAGAGCCTTTGCAAGGAGGATCACAAGAT
GTTAGAGTGAGTATTTTTATTCTAGTGAGATTTTGTCCTTTCTTTCCACT
TTCAAGAAGTGGTGTAAAATTATTTTTCACTATGAGAGAAACCTATTTGG
TCAGCTTATTCAGCTTATCAGAGGTTTCAAAAATGAATGAAATTATGAAA
GTGGTCAAATTTACTGTATCATAAACTTATCGTTTGAACCGTCACCGTGA
ATTTGTTCACTTAGCTAAATATAAGCTTTAGAGAAAATACGTATTTCCAT
ATTTTTCAGTTCCGGAATCCAACCAACGAATTCCGATTCGGTATATTACG
TGATAGCTCATACGAATCTTTTTTCAAAAACGGGGAAACGGATTTACTAA
AACGGATGAGTGTGTTCATGGAACCGTACAATTATGACACCCTTGCTGAG
GGTATGGATATGGTGCGAAATGGGTGTGTATACTAATATGAATAGCAAAT
TTCCACTATATCTTTATAGTAGTAGTCGAGTTATGGAGTAAGATTTATAA
GGTATGGTTAAGTGAAGTGAAGAGAAAATTTGTTCGAGTTAGGGAGACAT
TCGAGTTAAAGAGGTCGGCCTTAATTCAACCACAAAATCATGATGTGTAA
GTATTTTACTGTATTTACGACTAAAGCATTATCATTTTGAATTAAAACGT
TCATCGATATTTCTTTCAGGACTTTGCAAGCTTCATTCAGTGATTTCGCT
TTCCTGCATTTCTATTTATCAAAAGATCGTTCATGTCAACTCAAATTGGT
CAAAGATAAACTCTACTCCTTTGGCCTTGGGTTCCCAATGGCGAAAGATT
TTCCTTATCGAGAGCTGATTAATCAAGGCATTTTGAAATTTACCAGTAAA
GACATGATAGCAGAGTTACAGGCCAAATGGTTCGATAATATTTGCCAACC
GAATTTTTTTGTGACAAGCAATACGCAACTTTCGATTAAATTTTTTGGTG
GTTTGGTATTCATACTAGCGATGACGATTATTGGAGCTTTGTTGTTTCTG
TACCCAGAACATTTGTGGTGGAAATATTTTCATGAGAAAGTCTTGAAACT
GATGAAAAGGAAGATTTTGAAAAGTGAATTGAAAAGTCCGGTGACGTAA Coding sequence (CDS) from alignment at sc0000130_pilon:617069..621317- >XLOC_007486 ID=XLOC_007486|Name=XLOC_007486|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5070bp|location=Sequence derived from alignment at sc0000130_pilon:617069..621317- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTGGATTTATTTCACCAAAATGGATATCAATGTCTGTCTTACTGT
TATGACTTCATGGCATCTGGCATATGGTCAAAGACTTCTGGTGTTTTACG
AAAATGTTATCTTTGATTACGATGGTCCAACTTTTAATGGTGACATTCGA
AATGATTATCGATTTTCGTCCAAAAATAAGACTTCTTTTATTCGATATCA
CGACGATACGTTAGAACATTGTCAAGACATTTGGCGAAATTTATCATTCA
ACTCTTTACAAAAAGATTATGACGGTATAATTTCTTTAACAAAGTCACAA
AACCTTTTGAGCAAACAACTTTCATCTTCAAATGAAGTATTGGATATATT
ATATCAATTTGAATCAACATTTAGTAGATTGATGAACTGGATTTATTTCA
CCAAAATGGATATCAATGTCTGTCTTACTGTTATGACTTCATGGCATCTG
GCATATGGTCAAAGACTTCTGGTGTTTTACGAAAATGTTATCTTTGATTA
CGATGGTCCAACTTTTAATGGTGACATTCGAAATGATTATCGATTTTCGT
CCAAAAATAAGACTTCTTTTATTCGATATCACGACGATACGTTAGAACAT
TGTCAAGACATTTGGCGAAATTTATCATTCAACTCTTTACAAAAAGATTA
TGACGGTATAATTTCTTTAACAAAGTCACAAAACCTTTTGAGCAAACAAC
TTTCATCTTCAAATGAAGTATTGGATATATTATATCAATTTGAATCAACA
TTTAGTAGATTGAAATGGATGTTATCAAACGATCGACAATACTATTCTTG
TGTTTGGCTATCTCCTTTGTTTATCAGCACAGTATCCGCAATATTCAACA
TTTTACGGACCAAAAACCTGGCTGTACTCATCGAAGATAACTACTGTTCG
AATTTTTTAATGAGGGATATTCAAACATCTTTACTGATGCTAAATGGTAA
TAAAACAAAGACTATTTTCAATCCTATTTATGTTGGTTTGGCGCCTCATC
AAGAAGCGCGCAATCGTGATCAATTCTATGATCTCTTGGTGGAGGGACAA
ACAGATTTCCTCATGCTTTTGCAACGTGACCTACACAAACACGTGTTCAA
AATGGCGGCATTTTTCAGTTTGTTGGGACCACATCAACGTTGGTTGATAC
CAAATTTTGATCAAAATGAACCTTTAGGGTTTGGTAATGTATTACCAGGA
CAGATATTATCTTTCCAGTTGAAGACAAATGACAATTTTGGTGTGACGAA
GTTGTCCGATGTTGTTGGATGGATATCTGAAACCTTCCAACATTTTCGAA
ATGGATGTTATCAAACGATCGACAATACTATTCTTGTGTTTGGCTATCTC
CTTTGTTTATCAGCACAGTATCCGCAATATTCAACATTTTACGGACCAAA
AACCTGGCTGTACTCATCGAAGATAACTACTGTTCGAATTTTTTAATGAG
GGATATTCAAACATCTTTACTGATGCTAAATGGTAATAAAACAAAGACTA
TTTTCAATCCTATTTATGTTGGTTTGGCGCCTCATCAAGAAGCGCGCAAT
CGTGATCAATTCTATGATCTCTTGGTGGAGGGACAAACAGATTTCCTCAT
GCTTTTGCAACGTGACCTACACAAACACGTGTTCAAAATGGCGGCATTTT
TCAGTTTGTTGGGACCACATCAACGTTGGTTGATACCAAATTTTGATCAA
AATGAACCTTTAGGGTTTGGTAATGTATTACCAGGACAGATATTATCTTT
CCAGTTGAAGACAAATGACAATTTTGGTGTGACGAAGTTGTCCGATGTTG
TTGGATGGATATCTGAAACCTTCCAACATTTTCGAAATGACCAATCACTG
ATCCACAAAAGTTCCATTCTGTACTCAACACTGATGAGAAGGATGTACCA
TTCCAATATCCAATATCGACAATCACCTTTAGAAATATTTTACTACAATG
GTGAAAATCAAGGCGAATGGCAATCCAACCAAGGATTTATGCGTGATAAC
AAGTTGACCTTTTATGGCGATGTATTGAATATTCTACGGTCTTCTGAAAA
AATGACCAATCACTGATCCACAAAAGTTCCATTCTGTACTCAACACTGAT
GAGAAGGATGTACCATTCCAATATCCAATATCGACAATCACCTTTAGAAA
TATTTTACTACAATGGTGAAAATCAAGGCGAATGGCAATCCAACCAAGGA
TTTATGCGTGATAACAAGTTGACCTTTTATGGCGATGTATTGAATATTCT
ACGGTCTTCTGAAACAAATAGTCTTACAGATCGCATACGTATAGTCACAA
TAAACGATGCTCCGTATACTTTCGTTGATGGCAAATTTTACGACGCCGAT
AATGATATGTGTTCCGATGGTTTCTTATGTCAAATTCCGATACAAACGGA
TAGTTCCGGGCAACTTAATTACCAAAAGTCTTGTTGTATCGGTTTCATAC
CGGATATTTTCCGCATGGTCATAAAGAACGTTGCTATACCGTTCGAAATG
TACGTTGTTGCGGACGGGAAGTATGGCGGATTCAAGAACGGTACGTGGAA
TGGAATGATCGCGGATGTTGCTTACGGGAAAGCGGACATGGCGATGGCTG
CCATCACCATCACGAAAGAACGGTCAGATTCTGTATCATTTAGCGCCCCA
TTCATGTTCGACCAAACGGGAATCATAACAAAACCAGCAGTGGTTGAACT
GGATTTTTTGAATTGGGAGTTTTTGGCGCCTCTTTCCAAAGAGCTTCAAA
TTTATCTAGTGATTTTGGTTGTGGTTTGTATGCTGTTGCTTTACTTCTTT
GAAAATACAATATACTTTTACATTTATCACCACCATGGGTTCAGTCATAA
AGCGTATTACTCATTCCTCGAAGGACTTTCTCACATCTCTGGTGTAACTT
TACAAAGAGATCTTGGCGGGAAACATCCTTTATGCCCAGCCGCCCGTATC
ATGTGTTTGTTTTTCGCTATTGGGATGGTAATCATTGTTTCGACTTACAC
AGCCGTTTTGGCAGCACAAAGTTTGAAGAGTAAAGAGAGAGAGCCTTTGC
AAGGAGGATCACAAGATGTTAGACAAATAGTCTTACAGATCGCATACGTA
TAGTCACAATAAACGATGCTCCGTATACTTTCGTTGATGGCAAATTTTAC
GACGCCGATAATGATATGTGTTCCGATGGTTTCTTATGTCAAATTCCGAT
ACAAACGGATAGTTCCGGGCAACTTAATTACCAAAAGTCTTGTTGTATCG
GTTTCATACCGGATATTTTCCGCATGGTCATAAAGAACGTTGCTATACCG
TTCGAAATGTACGTTGTTGCGGACGGGAAGTATGGCGGATTCAAGAACGG
TACGTGGAATGGAATGATCGCGGATGTTGCTTACGGGAAAGCGGACATGG
CGATGGCTGCCATCACCATCACGAAAGAACGGTCAGATTCTGTATCATTT
AGCGCCCCATTCATGTTCGACCAAACGGGAATCATAACAAAACCAGCAGT
GGTTGAACTGGATTTTTTGAATTGGGAGTTTTTGGCGCCTCTTTCCAAAG
AGCTTCAAATTTATCTAGTGATTTTGGTTGTGGTTTGTATGCTGTTGCTT
TACTTCTTTGAAAATACAATATACTTTTACATTTATCACCACCATGGGTT
CAGTCATAAAGCGTATTACTCATTCCTCGAAGGACTTTCTCACATCTCTG
GTGTAACTTTACAAAGAGATCTTGGCGGGAAACATCCTTTATGCCCAGCC
GCCCGTATCATGTGTTTGTTTTTCGCTATTGGGATGGTAATCATTGTTTC
GACTTACACAGCCGTTTTGGCAGCACAAAGTTTGAAGAGTAAAGAGAGAG
AGCCTTTGCAAGGAGGATCACAAGATGTTAGATTCCGGAATCCAACCAAC
GAATTCCGATTCGGTATATTACGTGATAGCTCATACGAATCTTTTTTCAA
AAACGGGGAAACGGATTTACTAAAACGGATGAGTGTGTTCATGGAACCGT
ACAATTATGACACCCTTGCTGAGGGTATGGATATGGTGCGAAATGGTTCC
GGAATCCAACCAACGAATTCCGATTCGGTATATTACGTGATAGCTCATAC
GAATCTTTTTTCAAAAACGGGGAAACGGATTTACTAAAACGGATGAGTGT
GTTCATGGAACCGTACAATTATGACACCCTTGCTGAGGGTATGGATATGG
TGCGAAATGGGACTTTGCAAGCTTCATTCAGTGATTTCGCTTTCCTGCAT
TTCTATTTATCAAAAGATCGTTCATGTCAACTCAAATTGGTCAAAGATAA
ACTCTACTCCTTTGGCCTTGGGTTCCCAATGGCGAAAGATTTTCCTTATC
GAGAGCTGATTAATCAAGGCATTTTGAAATTTACCAGTAAAGACATGATA
GCAGAGTTACAGGCCAAATGGTTCGATAATATTTGCCAACCGAATTTTTT
TGTGACAAGCAATACGCAACTTTCGATTAAATTTTTTGGTGGTTTGGTAT
TCATACTAGCGATGACGATTATTGGAGCTTTGTTGTTTCTGTACCCAGAA
CATTTGTGGTGGAAATATTTTCATGAGAAAGTCTTGAAACTGATGAAAAG
GAAGATTTTGAAAAGTGAATTGAAAAGTCCGGTGACGTAAGACTTTGCAA
GCTTCATTCAGTGATTTCGCTTTCCTGCATTTCTATTTATCAAAAGATCG
TTCATGTCAACTCAAATTGGTCAAAGATAAACTCTACTCCTTTGGCCTTG
GGTTCCCAATGGCGAAAGATTTTCCTTATCGAGAGCTGATTAATCAAGGC
ATTTTGAAATTTACCAGTAAAGACATGATAGCAGAGTTACAGGCCAAATG
GTTCGATAATATTTGCCAACCGAATTTTTTTGTGACAAGCAATACGCAAC
TTTCGATTAAATTTTTTGGTGGTTTGGTATTCATACTAGCGATGACGATT
ATTGGAGCTTTGTTGTTTCTGTACCCAGAACATTTGTGGTGGAAATATTT
TCATGAGAAAGTCTTGAAACTGATGAAAAGGAAGATTTTGAAAAGTGAAT
TGAAAAGTCCGGTGACGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000130_pilon | genome | sc0000130_pilon:617069..621317 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2107-2535:430 |
| Aaloc | 1942-2103:841 |
| Aaloc | 1135-1941:1901 |
| Aaloc | 919-1131:2330 |
| Aaloc | 382-915:3214 |
| Aaloc | 1-381:4250 |
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