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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000246_pilon:306346..309824+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007140 ID=XLOC_007140|Name=XLOC_007140|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3479bp|location=Sequence derived from alignment at sc0000246_pilon:306346..309824+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTTCGTTAGACCACGAAACATTTACAACTTCAAAACGTTCTTTAGT
TTTAGCagaaataataaaaagtaaaataaagatGACAGACTCTGCAAGAT
CACTTAACCTTTCGTCCGGTAAGATTCTactattttgttaattttacttG
CTTCTACAATTCTATTTTCCGTTTTTAACTAACACAGCAATTCATGGAAA
CTACTGTGATCCTGTGGGGACCCTACTCCCTTATGTTTTCACTTCACTCC
GTTATATATTGAAATCTGAAAGAATCCAATGATTGTCTAAACTAATTCTA
AATAAAATAAGATTACTTTgattcatttttaatttctgaAACCTGCTTTT
TTATTTAGACATTCAACGAGCCATCGAATTACTGGATGAACTAAGCCAAA
GTAtgtgaatttcatttttaataaaCTCTTTATTTATAAGACTGCTGTCG
GGACCtggaaaaccttgaaaatgaaccttTTAAACactcaaaaatcttaa
aatatttaaatttgctgGGCAAATCTTTTAAACAATGTTCTATTCACAAT
TCTTTTGTACTGGCATAATTCTCTCCCTTTTCAAGAGAAAACTTCATATG
ATTAGGTGCCACTTACGCACACTTACGCTCTTCACACTCTTCACGCTCTT
CACTTTAGGCTGTTGGCCTGTTAGTTTTCTACGgaaaaaaaaaggaacaa
aatctGACATCTGGCAATCTCGACATTTTGATTAAAGGGTGTCATCAGCG
ATTTGCTTGACGGCATGATTATATTTTGTCACGTAaactaaaataaactt
ttaaaccatttttctctttttctttatcTTGTAGGAAATGATCTACcagc
tcaaaaaatgcaaaatctcAAATCGGTTTTGGAAAGTCACTTTTGCCAAA
GTGTAAAAGATGTAAGTGTTATACATTGTTATGAAACATTTTTTGTCTCT
CCTTTGTCAAAAGCCTGTTTATTTATTGCCTTATTTGGCGAATTGCCTtc
attgaaaaatcttaaaCATTACATTGGGCGTGGTGGACGTACTAAAGACG
TTACCGCCTAATGAAAAATCCAAGGACATCTGTTATATGAACACGATACT
TCAAGATACttctctgaaaaatattttcgtagGTTTACGAACAAGTTTAC
GAGACGGTAGATTTCAATACAAATGATGAAGTACGTGCGAACGCAACAGC
AAAGGTATGTTTTGACGTCTATAACATTCACTACGTACAAGCACTATACG
AAAATATTATTAGGTATATTCTTCCCCAAAACTTGACGATTTTAGTTTCT
GCTCAGCTTAGAATCCCTAAAGAGTCTTGTAGaaaaaaaCTGTTGTAATA
CTGCCACGTGCATATGATCTACTTAGCCTTCGGATTGGTTGAAAACAGTG
CAAGAGTGTTTATCATAGTACATAAACTTGTCTTTGATAacatttctgtt
ttttttgttattatcgGTCTGGCTGATTTCATGGTAAAAAAGGACAAGTT
AAAAGTCTCTAAGAAGCTtatttttgaccaatttgtttCTTTAGTTTTTA
TAACTCGAAATAATTATATCTAGGCAACAGTAGCGGCATTTGCAGCGAGT
GAAGGGCACGCACACCCAAGAATTGTTGAATTACCAAAAACTGATGAAGG
ATTAGGATTTAACGTTATGGGAGGACTGGAACAAAATTCACCAATTTACA
TTTCCAGAATTATCCCTGACGGTGTTGCTGATAGGTATATACGCTTTTAA
TTAAGAACCCGTAAAGTTTGATCTCATAATAAATCATTCCTTCGGCCATT
CTGCTTACACCACGCTCTGCTTAAGGAAGGTGGCGAATGTGTTGATATGA
CCTGGTTGATTAAACAAACATTTGAACAAACGTTGCCTTTTGCTGATTCT
CTAAGCCTTAGAGTGCACACATGTCAGCGTGAAGTAACCAGAATCTGCCC
GGAGATGAGTAAATTTTGGTTCAAATACgactctttttatttttacgaaa
aagTTAAGATGAAATGTTCATTTATAATGAACATTATGCTCATTATGCTC
TTTTTAGATGGAATTTACCCGAATCATGGTCCATAACCATATGAAACTCA
CCAAAAGTAGACTCTGATACTAATGAATTAGCCGTAAAAGTAGCATGGCT
TGTAACGGCCCTCGCTTTTATTACTTACACATTTTCCTTTACACTAATTT
AGACATGGTGGTTTGAAACGTGGCGATCAACTGCTTGCAGTAAATGGCGT
GGTAAGGGCATTTattgtgttgtttttttattgtctGTACCAGAGCAACT
AAAGTATTCAAATGAAATGACGAAAACCTTTCACCTTTAACTTTATTCAA
TCTACACAATCATTTCGAGTCAGGATTTATCCAGCGTATCAAATTATCAA
TCGCCAATAAACGTCCTTTATACTTATAACGCCCCTTATTATCACAGCAT
ACTAAAAATGGAATCTCTTCAATCCAtttttcaatttcctttttttttgt
agAACGTTGAGGGGGAGCACCACGAGAAAGCTGTAGATTTATTGAAAGAG
GCTGTTGGAAGAGTCAAACTTGTCGTTAAATATACTCCCCaaggtatttt
atgaaattgtttaCACAATTGTTCTTGATTATCTTCAGCGGATGTCTTGC
GGACATGCAATGGTCACGTTTTAACACCAACATCTCTAATGAGGACTCAC
GTGACCTTTGCATTACTAATAATACATTGCTTTACTGACAGACCTTCGTA
CTTCGAATTGCTCTGCAcgtgtttaaaaaatattgtttcgAAAATTCGTC
AATTCGACAAATATAATGCTCTGTGTAAGCGCTCTATTTTACATCCGGGA
AAGAAAAAGTCCCTATAATTTCGAGTCCCTTTAgcttcaaaagattttct
tctGGGCCAgattattctaaaaaaaaaagtgaagaccaaaaacaaaattt
tgttcatccTTGACGTTTCGATATTTCTTGTATCATGATCATTGTAAGCT
AACATTTGCTTGTGATCATGATACAAGAAGTATCGAAACGTCAAGGATGA
acaagattttgttttttgtcttcCCTTTAGCTTATACTTTTCCTATAAAG
TTTATTCAACTTTAAAATAATATTCTTTAAGAAGAAAAGAGGAAATTATA
CTAAATTACTAAAACTGTGACTTCGAGACAAAATATTGGGGTAAAAAGTT
TGTAATATGTCTTTTATGGGGAAAGAGACACCTCGTTGAAAAACAAGGGA
AAAAGGGGAAATGAaagttttactttctttttgtcCTGGAATTAGGATAC
TCACAATACAGATAGGTTTAGGCtagttttctttattatttgggggactc
ttttggggggttttcgtgtagcaatttctgtttttctttctcccaataac
tttcaaatatatttttcgtttactttttttttcagttcttgAAGAAATGG
AGTCACGTTTTGATCGTAGAAAGAAATGA Coding sequence (CDS) from alignment at sc0000246_pilon:306346..309824+ >XLOC_007140 ID=XLOC_007140|Name=XLOC_007140|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1308bp|location=Sequence derived from alignment at sc0000246_pilon:306346..309824+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTTCGTTAGACCACGAAACATTTACAACTTCAAAACGTTCTTTAGT
TTTAGCagaaataataaaaagtaaaataaagatGACAGACTCTGCAAGAT
CACTTAACCTTTCGTCCGATGCTTTCGTTAGACCACGAAACATTTACAAC
TTCAAAACGTTCTTTAGTTTTAGCagaaataataaaaagtaaaataaaga
tGACAGACTCTGCAAGATCACTTAACCTTTCGTCCGACATTCAACGAGCC
ATCGAATTACTGGATGAACTAAGCCAAAACATTCAACGAGCCATCGAATT
ACTGGATGAACTAAGCCAAAGAAATGATCTACcagctcaaaaaatgcaaa
atctcAAATCGGTTTTGGAAAGTCACTTTTGCCAAAGTGTAAAAGATGAA
ATGATCTACcagctcaaaaaatgcaaaatctcAAATCGGTTTTGGAAAGT
CACTTTTGCCAAAGTGTAAAAGATGTTTACGAACAAGTTTACGAGACGGT
AGATTTCAATACAAATGATGAAGTACGTGCGAACGCAACAGCAAAGGTTT
ACGAACAAGTTTACGAGACGGTAGATTTCAATACAAATGATGAAGTACGT
GCGAACGCAACAGCAAAGGCAACAGTAGCGGCATTTGCAGCGAGTGAAGG
GCACGCACACCCAAGAATTGTTGAATTACCAAAAACTGATGAAGGATTAG
GATTTAACGTTATGGGAGGACTGGAACAAAATTCACCAATTTACATTTCC
AGAATTATCCCTGACGGTGTTGCTGATAGGCAACAGTAGCGGCATTTGCA
GCGAGTGAAGGGCACGCACACCCAAGAATTGTTGAATTACCAAAAACTGA
TGAAGGATTAGGATTTAACGTTATGGGAGGACTGGAACAAAATTCACCAA
TTTACATTTCCAGAATTATCCCTGACGGTGTTGCTGATAGACATGGTGGT
TTGAAACGTGGCGATCAACTGCTTGCAGTAAATGGCGTGACATGGTGGTT
TGAAACGTGGCGATCAACTGCTTGCAGTAAATGGCGTGAACGTTGAGGGG
GAGCACCACGAGAAAGCTGTAGATTTATTGAAAGAGGCTGTTGGAAGAGT
CAAACTTGTCGTTAAATATACTCCCCaagAACGTTGAGGGGGAGCACCAC
GAGAAAGCTGTAGATTTATTGAAAGAGGCTGTTGGAAGAGTCAAACTTGT
CGTTAAATATACTCCCCaagttcttgAAGAAATGGAGTCACGTTTTGATC
GTAGAAAGAAATGAttcttgAAGAAATGGAGTCACGTTTTGATCGTAGAA
AGAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000246_pilon | genome | sc0000246_pilon:306346..309824 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 613-654:3438 |
| Aaloc | 520-609:2503 |
| Aaloc | 472-519:2204 |
| Aaloc | 310-468:1574 |
| Aaloc | 238-309:1133 |
| Aaloc | 163-237:837 |
| Aaloc | 121-159:361 |
| Aaloc | 1-117:1 |
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