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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000246_pilon:213640..217198- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007127 ID=XLOC_007127|Name=XLOC_007127|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3559bp|location=Sequence derived from alignment at sc0000246_pilon:213640..217198- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAATGATGGTGACCAAAGAATCAGTTTTGATGAATTTTGTACCTT
TTTTGGTGATGTTCCATCACCCAACATGCAGTTTATTGCTAACCTATGGT
CTACAGGTGAAGGACTAGATTTTGGTTCTGATGTTGTACCTATTAGTATA
CCTCCTGCTGAAATGCCACTTTATCAGTTCATGATTGCAGGTGGGGTTGC
TGGAATAGCCTCAAGAACGTTGACTGCGCCTTTGGAAAAGTTGAAGATTA
TTGCACAGGTAATTATTATAAATATTATGCTTCTTTTCTAATAATATTAA
AATTTTATTCGTTTTTTGGTTACGAATTTTGTCAAATTTTTCTTGCAGTG
GTGTTTGTTTAATACCTTCAATTTTATGGAGGAAATTTTATGCCACTGGT
TTCAGGGTTGGTAATATATAAGTGACCTTTAACTTTGTAGACTTCTTCAA
ACCAAACGACTAAACTATCACAAACATTTACACACATTTATCGACACGAA
GGAATGAGAGGATTCTTCGCTGGAAATTTTGCCAATTGTGTTCGTGTTTT
TCCTACATCTGCCTTAGTATGTCTGGTATACTCAAGAATGATCAAGGTAA
TATCATGTTTTCTCTAAAAGAAATTTTTGGTGTGAAAAAGTGGCTTTGGT
ACTAAATTTTTCCCTTTTTCCCTTTCTGTTTATGAAATGTATGATTCTTC
TTTAGCCAAAGAAATTGAATAAATAGTAGATTAAATTTGCAAGATGAGTA
AATTATTTGTGAAAAACAGATTCTCAAACATCCTGAGAAGCCTGTCGAGT
CTTAAAATTAGACTAGACCTCTTAGACCCATAATATTTGTTTATTCTTTG
AAAATTACATGATATAAAATCATGCCTCTCTCTTTATTCTAGTACACACC
AGTAGATAACACAAAGAATCCTAACCAACCCTTGTGGAGGTTTGTGTCTG
GTGTGACCGCTGGCATCGTGTCAACCGCAGCCACTCATCCTTTGGATGTT
GTCCGTGCAAGACTCACTATTCAAGATAGAACGTCTGCTAATACTTATAC
TGGAATATTGAATGCTTTCAAAAGAATTACTGCTGAGGAAGGCTACCAAG
GACTCTATAAAGGTATATGCTTTTTATAAGAATCATCATTTGCTGTTTAG
ATGAATGAATACTCACGATAGTCCTGAAATAAGAGTCTTAGGCAATTCTT
CTGGCTAAAATTCTCCTGATTGATGATTATACATTTACAGTATCAAATGT
TTTAAACTGATGATACACTAGGACGGAATGAGGGAGAATATAAGAATGTT
TAGTACATGAGATTTTAGTTAGTTTTAACTTGATTTGTGACTCCTGGCGA
TTATACATTTTTTGTATCAGATGTTTTAAACTGATGATACACTAGGACGG
AATGAGGGAGAATATGATATTGTTTAGTTCATGAGATTTTAGTTAGTTTT
ATCTTGATTTGTGACTCCTGGCGATTATACATTTACCGTGATTGATGATT
AGTGATTTACAGTATCACATGTATCTGATGACACTAGGACGGAATGAGGG
AGAATATGAGATTTAATGATGTTTTAGATGATGGATGATACCTGGAGATT
TTAGTTATGATTTTAGTTCTTGATTTGTGACTCCTGATGATTATACATTT
ACAGTATCAGATGTTTTAAACTGATGATACACTAGGACGGAATGAGGGAG
AATATGATATTGAATGATTTTAGTTTTAGTTTAGATTCATGAGATTTTGT
TTAGTTTTTAGTTCGAGTTGTGACTTGTGGTATCTCCTGGATGATTATAG
TTCATTTACAGTATCAGATGTTTTAAACTGATGATACACTAGGACGGAAT
GAGGGAGAATATGAGAATGTTTAGTTCATGAGATTTTAGTTAGTTTTATC
TTGATTTGTGACTCCTGATGATTATACATTTACAGTATCAGATGTTTTAA
ACTGATGATACACTAGGACGGAATGAGGGAGAATATAAGAATGTTTAGTT
CATGAGATTTTAGTTTAGTTTTAGCTTGAGTTGTGACTCCTGATGATTAT
ACATTTACAGTATCAGATGTTTTAAACTGATGATACACTAGGACGGAATG
AGGGAGAATATGATATTGTTTAGTTCATGAGATTTTAGTTAGTTTTAGCT
TGACTTGTGGCTCCTGATGATTATACATTTACAGTATCAGATGTTTTAAA
CTGATGATACACTAGGACGGAATGAGGGAGAATATGATAATGTTTAGTTC
ATGAGATTTTTGTTAGTTTTAGCTTGATTTGTGACTCCTGATGATTATAC
ATTTACAGTATCAGATGTTTTAAACTGATGATACACTAGGACGGAATGAG
GGAGGATTTGATATTGTTTAGTTCATGAGATTTTAGTTTTGATGATCTTT
TAACCCGAGATGAACATGACAGTAGGGAGGAATTAGAGAGAAAAAATATT
GTGTCTTGGATCGCTGGTACCACCCCTACCTCCACGGGCTTTTTTCCAAA
ATCTTGTCGTGTGTACTTCGATTCTTTGTGAAGAAGAGTTTGGTACAGGC
TAAAAAAAGGTAAAGGTTGAACAATATTACCGGCACAAAACGTCAAAATA
AAACGACAATTATCCATAACCTTGACGTAGAAACATACTGAAGTCGTCAA
AACAATTTTAATCTTTCCAGGTTTACGACCCTCACTGGTATCGATCGCAC
CGTTCCTTGGTTTACAACAATGCTCATATGACGTATTGAAACTATACGCT
GTCAAACGTTACAGTGAAAGTCACACTACGTTTTTGATGTGTGGTGCTTT
TGCTGGAATGTTTGCCCAAACGGTATGTATTCATCTGACTTCTCTTTTAA
TCGAATAGTTTCTAAATGTTTTATTCTTGAGGTATGTTTATACTTCTACC
AGCCTCAAAAGAATAATATTCAGTGGGAAATCGGGTTTTAGTTGCCCTTG
AGTATCATCTTGACCTGTTTTGTTTTTGCCACGACTTGGATAATTTGAAT
TTATTAAAGTTGATCTAAGTTTTGGGATTTTCTTGTAACGAGAGAGTTAA
TTTTGTAACATCATGGCTCTCAAGGAAAAATTGCATCAGATTTTATTACT
TAAAATAGGCCATAGCGCGCAGTGGTCCTGATTACCCATTGCGCTTTGCG
ACTGTGAAATGGTCTATATGGCTCACGGTTGCGATTAATCATGGGTAATC
AGAACTAAAGACTTAATTTTTCCAATTTTTTTCAAGATTCTACGTCTGTC
CGACGAAGTTACAGTAGTTCGTCGTTACAGGTCAAAAAGTCCTGATTACC
CATAATTAGATTTATAACTGTTTCTTACGTGTTTACGTATTGTTAGGTTG
TTCACCCGTTGGACGTTATTCGACGGCGTATACAAGTAGAACGCGCGTCA
TCACCGCAACATTTTGTGTCCGCTTTGCGTGACTTGTGGAATACAGGCGG
TTATCGTGGTATTTATGCTGGGTTATCGGCATCATACTTGAAAGTCATTC
CTGCAGCAGCATCCAGTTTGTTAGTCCGTGATTTCTTACTGGGCCGGATA
CAAGGTTGA Coding sequence (CDS) from alignment at sc0000246_pilon:213640..217198- >XLOC_007127 ID=XLOC_007127|Name=XLOC_007127|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1998bp|location=Sequence derived from alignment at sc0000246_pilon:213640..217198- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAATGATGGTGACCAAAGAATCAGTTTTGATGAATTTTGTACCTT
TTTTGGTGATGTTCCATCACCCAACATGCAGTTTATTGCTAACCTATGGT
CTACAGGTGAAGGACTAGATTTTGGTTCTGATGTTGTACCTATTAGTATA
CCTCCTGCTGAAATGCCACTTTATCAGTTCATGATTGCAGGTGGGGTTGC
TGGAATAGCCTCAAGAACGTTGACTGCGCCTTTGGAAAAGTTGAAGATTA
TTGCACAGATGGATAATGATGGTGACCAAAGAATCAGTTTTGATGAATTT
TGTACCTTTTTTGGTGATGTTCCATCACCCAACATGCAGTTTATTGCTAA
CCTATGGTCTACAGGTGAAGGACTAGATTTTGGTTCTGATGTTGTACCTA
TTAGTATACCTCCTGCTGAAATGCCACTTTATCAGTTCATGATTGCAGGT
GGGGTTGCTGGAATAGCCTCAAGAACGTTGACTGCGCCTTTGGAAAAGTT
GAAGATTATTGCACAGACTTCTTCAAACCAAACGACTAAACTATCACAAA
CATTTACACACATTTATCGACACGAAGGAATGAGAGGATTCTTCGCTGGA
AATTTTGCCAATTGTGTTCGTGTTTTTCCTACATCTGCCTTAGTATGTCT
GGTATACTCAAGAATGATCAAGACTTCTTCAAACCAAACGACTAAACTAT
CACAAACATTTACACACATTTATCGACACGAAGGAATGAGAGGATTCTTC
GCTGGAAATTTTGCCAATTGTGTTCGTGTTTTTCCTACATCTGCCTTAGT
ATGTCTGGTATACTCAAGAATGATCAAGTACACACCAGTAGATAACACAA
AGAATCCTAACCAACCCTTGTGGAGGTTTGTGTCTGGTGTGACCGCTGGC
ATCGTGTCAACCGCAGCCACTCATCCTTTGGATGTTGTCCGTGCAAGACT
CACTATTCAAGATAGAACGTCTGCTAATACTTATACTGGAATATTGAATG
CTTTCAAAAGAATTACTGCTGAGGAAGGCTACCAAGGACTCTATAAAGTA
CACACCAGTAGATAACACAAAGAATCCTAACCAACCCTTGTGGAGGTTTG
TGTCTGGTGTGACCGCTGGCATCGTGTCAACCGCAGCCACTCATCCTTTG
GATGTTGTCCGTGCAAGACTCACTATTCAAGATAGAACGTCTGCTAATAC
TTATACTGGAATATTGAATGCTTTCAAAAGAATTACTGCTGAGGAAGGCT
ACCAAGGACTCTATAAAGGTTTACGACCCTCACTGGTATCGATCGCACCG
TTCCTTGGTTTACAACAATGCTCATATGACGTATTGAAACTATACGCTGT
CAAACGTTACAGTGAAAGTCACACTACGTTTTTGATGTGTGGTGCTTTTG
CTGGAATGTTTGCCCAAACGGTTTACGACCCTCACTGGTATCGATCGCAC
CGTTCCTTGGTTTACAACAATGCTCATATGACGTATTGAAACTATACGCT
GTCAAACGTTACAGTGAAAGTCACACTACGTTTTTGATGTGTGGTGCTTT
TGCTGGAATGTTTGCCCAAACGGTTGTTCACCCGTTGGACGTTATTCGAC
GGCGTATACAAGTAGAACGCGCGTCATCACCGCAACATTTTGTGTCCGCT
TTGCGTGACTTGTGGAATACAGGCGGTTATCGTGGTATTTATGCTGGGTT
ATCGGCATCATACTTGAAAGTCATTCCTGCAGCAGCATCCAGTTTGTTAG
TCCGTGATTTCTTACTGGGCCGGATACAAGGTTGAGTTGTTCACCCGTTG
GACGTTATTCGACGGCGTATACAAGTAGAACGCGCGTCATCACCGCAACA
TTTTGTGTCCGCTTTGCGTGACTTGTGGAATACAGGCGGTTATCGTGGTA
TTTATGCTGGGTTATCGGCATCATACTTGAAAGTCATTCCTGCAGCAGCA
TCCAGTTTGTTAGTCCGTGATTTCTTACTGGGCCGGATACAAGGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000246_pilon | genome | sc0000246_pilon:213640..217198 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 787-999:214 |
| Aaloc | 637-786:888 |
| Aaloc | 415-633:2668 |
| Aaloc | 259-414:3120 |
| Aaloc | 1-258:3560 |
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