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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000246_pilon:295331..298564- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007123 ID=XLOC_007123|Name=XLOC_007123|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3234bp|location=Sequence derived from alignment at sc0000246_pilon:295331..298564- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCTGTTTCACTATGTAACATACAAATATATTATCATCAAGGATAA
ACGGCTTGGAATAGCCTACTATATATTGGCATTTCTCATAATATTTTATA
CATTGGTTCAGCTCTTGGTCAACAAATCATATTTACAGGTATGCTCGTCC
GTCTATTATCTCTCCAGTCCAGTCACAATAAGTCTTTTGTTTTTATATAC
CAGATTCTCCCATCCCATCATCACTCATTATCCAACATAATAGAACGTAA
TCAAATCTCAGTCAAATACAATCGAATCCGTAAATTGCGGTAATACTGTA
TTCAATTAGGATTCTATCGTTTTGGACAGTTGAAAATTTCAATCGGTCGA
TTGCGTTTGATTTGGTTCGACTGGTTAGTTGGATCATCAACTATTCCATC
CGTTTAATTGAGATTGTCTGGCCATTATCAACCATTTTTTGTGTCAATAT
CATCTGTCTCAATAATACTCATTTTTGTTTAGCATTAATAAAGCTTGTTT
TAGCCTTTTTCATTTTATTAAAGATTATTTTTTATCATATCATGATAATA
TAATGCATACGTATGGGTGCATGTCACTAGTCCGATTTTTTCTAGTCAGA
CAGTAAAATAGTCTGAATCTATAAAATAAATTCACAATTTAGAAATCTTT
TTTTCCGACGTCACTTTTGTCCGAGAACGAGCCATTATTCACTGAGATAA
TATTAATTAAAGTTCAATTTGGCGGCATAATTAGAAATAAAGTACCACTA
ACTTTAATTACAGCCCCACCCCCCAAAAAAAAAAAAGAAAAAAAAAGAAC
AAAAGGATTTAAGGATTTTTAGGGTGATGAATTTTGTTTTTAATGTTTAG
TATGATTCCTCACCAAGTGGAAACATGAGAATCCTTGTCAACACGCCCAC
AAAACTTCAAAACGATGAAAATGAATATAATATCAATCCTGATTATTGCA
AACAAAAGGAAAGTGCAAACAGTACAATATGTAGAAAACTAGATGGGTTA
TCAATTAACTGGCCAATTGAATCACGTTCTGTTACTCTTGCTACATTTAT
TAAAGAAAAATGGCAAAGACCAAAAGATTGTCAATATGCTCTTGTTTATG
ATCCAGAAAATCCAGTAAAATATGAAGATTTGAGGTAATTAACAAAGCTG
CACTAATCACACAGATTAAATTTTGGTAAATTTAGAGGAATGTTTTCAAA
TATCATTACAGCAGGTTACATTGTTTCAATTTTTCAATTAATAACGACAT
GAAATCAAATGATAAGCACATGATTTGTGCTGCAATAGAAAGCTAAAACA
TATATTTTTTTCTTGTGAAAATATAAAAAGTTCCATTTTTCTATTTATAC
CGATTTTGTGTTTCAATTTATAGGGACGTCGATTACTATGCAGTAAATCC
TGAGTTTGCTTTGATCAAGGTTGAACATTCGTTTACAGCCTTTTCTGGCC
AGCTGACACATTCACATCGCAGGATGTCTGGATCACTTGTTGATATGAAT
GGCAATACAATCAAAAGGTGATCATTTGTACATTTGGTTTTATATTTAAG
GAGGATTATTTTCAGAGTATGTGAAATAGTTTTGTCGATTTTTGAGCAGT
CAAATTACTAATCTACTAATCTACAAATTATAACCATAATAGCTTTCACT
CATGCAAACTTTGTTAAAAAAATGGGGTTAATATGTAGGGAAGTATGATA
ATCGGTATGGTTCCAGACTACCGTATTATTACTTTGGTTTTTTAAGAGAA
GCGTTTATTAGAGGGGCATTTTATTTTGAAGTAATACAGAGAGAATAATG
CATGAACTCTGAGGTGTGCACTTTTGGTTTTTGATTTACATCTCATTTTT
TTACGATTGTAGCGCTGTTTTCTTTAGTACAATTGATTTCAAACCTATTT
AGATCCCTTTTATTTTTAGACTGAATTCTAATGGAGTATCGAAGGTTGAC
AAGATTTTACTCAAAGATTTTTTGATTGCAGCCAACGTGTCTTTAGATGA
AGTGTCAGATGCTTTGAATGCAAAAGAGCGTACCTTTCGTCAAAACGGTT
TAATACTTCATGTCTCGATCATGTATAAAAATTCTGAGAAAATGTTGTAT
GGCGTCAAGTAAGGAATACAAAACATTTTATTTTTATTTTTTTTGAAGGT
ATTATTTTCGGGTACTCTCAGGTTCCAAATAAAATTGAGGTACGATAAAG
AGTACTCGTATGGATCACACATACAGATGAGATGGAGTTTTTATAAGATA
CTTTAATAATTGGTCATTTGATGTAATAAAAATTGGCGTTCTTTGGAAAA
AATAAGAAAATCGTTTTATTACTGTTAACGACCAACCAAATCAATTAAGA
GCTTGTAAAAACTCCATCTCGTCCCCACACATACCCGTCACGTCCCCGAA
GTGCATTTTTTAATACTCGTTTTTCAAGGGTTTGCCTAACTTTCTATTTA
GTATTCCTGAATATACGTACCATGTCAGAAGAGTACCGTTTTCCGATTAT
CGCTTGAAACAAGAAATTCCTATTGCTAATAATGAGGGAAATATTTGTGA
ACGAATCATCAAGAAACGATATGCTGTTAGAATTGAATTTCACCAAGGAG
GAAAAATTGGTAAGGTATTTATTGATATAATGTGTTGTTGTTTTTTTAAG
TTTAATCTTCACGGTCGTACAGTTTATTCTGCTTTTGTCATCCGCACATT
TGCAAAAATGTATTGTACGACTTTACTCCATGTTTGCTGCGATAGAAACG
ACTAAAATGGGATAAATGTTTGTGAGCATCATTGTGCTTATGATTAGTAG
AAATAGAGAACGATTAAATTAAAAGCTTGGGAGTTTCTACTTTTCTGAAA
TTTCATAGATTCTTGAAGCATAGCATTTGTGTATGTTTTTACAGCATTTC
ATTTTTGGCCAGATTTGATTACAAAATTTGTTCAATTTGACAAAAAATTT
ACTTCGCTCCGACTCAAGTCAAATCTATAAATTATTGGATTTGTCTTTTT
ATCTTATATTTTCTAGGTCAATTTTCATCAGCAAATCTAGTCTTCCAATT
GGTTTCAGTGATGGGTTTGTTAACACTGACAGCAACGGTTATTGATGTTA
TAGCTCTTTATATTGTTCCAAACAAAGATAATTATAGGCAATACGTTTTT
GATGAATCACCGGAATTTTCAGAGCAAGAAAAACAAACTTTGAAAGAAAA
TGTAAATGATGAACAATCGAAGAAAGATCAATGA Coding sequence (CDS) from alignment at sc0000246_pilon:295331..298564- >XLOC_007123 ID=XLOC_007123|Name=XLOC_007123|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2262bp|location=Sequence derived from alignment at sc0000246_pilon:295331..298564- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCTGTTTCACTATGTAACATACAAATATATTATCATCAAGGATAA
ACGGCTTGGAATAGCCTACTATATATTGGCATTTCTCATAATATTTTATA
CATTGGTTCAGCTCTTGGTCAACAAATCATATTTACAGATGTCTCTGTTT
CACTATGTAACATACAAATATATTATCATCAAGGATAAACGGCTTGGAAT
AGCCTACTATATATTGGCATTTCTCATAATATTTTATACATTGGTTCAGC
TCTTGGTCAACAAATCATATTTACAGTATGATTCCTCACCAAGTGGAAAC
ATGAGAATCCTTGTCAACACGCCCACAAAACTTCAAAACGATGAAAATGA
ATATAATATCAATCCTGATTATTGCAAACAAAAGGAAAGTGCAAACAGTA
CAATATGTAGAAAACTAGATGGGTTATCAATTAACTGGCCAATTGAATCA
CGTTCTGTTACTCTTGCTACATTTATTAAAGAAAAATGGCAAAGACCAAA
AGATTGTCAATATGCTCTTGTTTATGATCCAGAAAATCCAGTAAAATATG
AAGATTTGAGTATGATTCCTCACCAAGTGGAAACATGAGAATCCTTGTCA
ACACGCCCACAAAACTTCAAAACGATGAAAATGAATATAATATCAATCCT
GATTATTGCAAACAAAAGGAAAGTGCAAACAGTACAATATGTAGAAAACT
AGATGGGTTATCAATTAACTGGCCAATTGAATCACGTTCTGTTACTCTTG
CTACATTTATTAAAGAAAAATGGCAAAGACCAAAAGATTGTCAATATGCT
CTTGTTTATGATCCAGAAAATCCAGTAAAATATGAAGATTTGAGGGACGT
CGATTACTATGCAGTAAATCCTGAGTTTGCTTTGATCAAGGTTGAACATT
CGTTTACAGCCTTTTCTGGCCAGCTGACACATTCACATCGCAGGATGTCT
GGATCACTTGTTGATATGAATGGCAATACAATCAAAAGGGACGTCGATTA
CTATGCAGTAAATCCTGAGTTTGCTTTGATCAAGGTTGAACATTCGTTTA
CAGCCTTTTCTGGCCAGCTGACACATTCACATCGCAGGATGTCTGGATCA
CTTGTTGATATGAATGGCAATACAATCAAAAGACTGAATTCTAATGGAGT
ATCGAAGGTTGACAAGATTTTACTCAAAGATTTTTTGATTGCAGCCAACG
TGTCTTTAGATGAAGTGTCAGATGCTTTGAATGCAAAAGAGCGTACCTTT
CGTCAAAACGGTTTAATACTTCATGTCTCGATCATGTATAAAAATTCTGA
GAAAATGTTGTATGGCGTCAAACTGAATTCTAATGGAGTATCGAAGGTTG
ACAAGATTTTACTCAAAGATTTTTTGATTGCAGCCAACGTGTCTTTAGAT
GAAGTGTCAGATGCTTTGAATGCAAAAGAGCGTACCTTTCGTCAAAACGG
TTTAATACTTCATGTCTCGATCATGTATAAAAATTCTGAGAAAATGTTGT
ATGGCGTCAATATTCCTGAATATACGTACCATGTCAGAAGAGTACCGTTT
TCCGATTATCGCTTGAAACAAGAAATTCCTATTGCTAATAATGAGGGAAA
TATTTGTGAACGAATCATCAAGAAACGATATGCTGTTAGAATTGAATTTC
ACCAAGGAGGAAAAATTGTATTCCTGAATATACGTACCATGTCAGAAGAG
TACCGTTTTCCGATTATCGCTTGAAACAAGAAATTCCTATTGCTAATAAT
GAGGGAAATATTTGTGAACGAATCATCAAGAAACGATATGCTGTTAGAAT
TGAATTTCACCAAGGAGGAAAAATTGGTCAATTTTCATCAGCAAATCTAG
TCTTCCAATTGGTTTCAGTGATGGGTTTGTTAACACTGACAGCAACGGTT
ATTGATGTTATAGCTCTTTATATTGTTCCAAACAAAGATAATTATAGGCA
ATACGTTTTTGATGAATCACCGGAATTTTCAGAGCAAGAAAAACAAACTT
TGAAAGAAAATGTAAATGATGAACAATCGAAGAAAGATCAATGAGTCAAT
TTTCATCAGCAAATCTAGTCTTCCAATTGGTTTCAGTGATGGGTTTGTTA
ACACTGACAGCAACGGTTATTGATGTTATAGCTCTTTATATTGTTCCAAA
CAAAGATAATTATAGGCAATACGTTTTTGATGAATCACCGGAATTTTCAG
AGCAAGAAAAACAAACTTTGAAAGAAAATGTAAATGATGAACAATCGAAG
AAAGATCAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000246_pilon | genome | sc0000246_pilon:295331..298564 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 916-1131:217 |
| Aaloc | 757-912:783 |
| Aaloc | 568-753:1315 |
| Aaloc | 424-564:1861 |
| Aaloc | 139-420:2385 |
| Aaloc | 1-138:3235 |
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