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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:1330714..1333777- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007093 ID=XLOC_007093|Name=XLOC_007093|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3064bp|location=Sequence derived from alignment at sc0000023_pilon:1330714..1333777- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGACGGCAAGAAAACTAACCAAAAGTATCGATGACCTTTCTAGCAG
TGAAGCTTCAGCTGCTGAAATCATCTCAAAAATGTCAGAATACCAATTTA
TAGCTGTTGTCCAAGATGGAAATGCATGCGAGCCTATGGAGCAAGTCGTG
AATGAAAAAGGTGAGGTAGTTGCTATAAATACAGATGAATATTATGAGAC
AATAGGACAAGCAGTACCTGTCGAGTTGAATTTTGAATCCGCTGATGCAG
GAATTAACGAATTAAAGAGACAAAACGGTGAAGGAATAAAAGAGGCTGAT
TCTAATGAAGAAGTGATTGCTCAGGAAGAGACTATTGAAAATGTTGAACA
GGATGAAGGGGTAGAATCAGTTCCATCGGATGCTGAAATTATTGCAAGAA
TGGTTGTTGAGCGTGAACAACTACAAGGTAACAATGAAAATGTAGCTGGG
AATTTGAAGGATATGTTGCTGCCACTTGGTATAAAAATACCAAATCATCA
GAATATTATTGGAACTAAAAGAAAACGACCTAAAAGTTCCTTGTTTATTG
GATGTTCACCTGAAGCAACTCAAGTAATCAATGAATTTGATGCTCTTAAA
GAACGCCTTCAGATCAAAACAAATTTAGACATGCTAAAACATATGCTGAA
GCTTGAAAAGAAATACTTAAATTCCACTGTTGTTACTACTGAGTGCATTG
TTGACGATGGCAACAAAAATACAAAGGCTATTTTGCAACTTCTGTCGACG
TCGTCAGCAGCCACTGACCATCATCAAACAAAAACATTGGATAATGAGAT
AATAACACCACGGTTAGCAACAGATGAGCTGCATGGCAGTGATACGATGG
AACCATCAGGCATAAGAAATGAAGAAGTCACAATTAATATAATGAAGTAA
GAAGGAATATAAATTTTTGCTAAATGTGCTTACATGATAAATAACTGATT
AAGATACTAAGCATAAAACAGCCCTATATCGTTTGATGATTGAATAGTCA
TTTCAACATTGTTCAGCAATAAAAATCTATTCTATTTGTAAATCAACATA
GCTAACACAGCAAAAAACCTTTTGCTAGATGTCATGTTGAATAATTTAGA
ACTCCAGCTTTGAAGCAATGATAAGAAAAAATTAATGCACACTTGAAATA
ATTTTGCATTAATGTGTGATTGTTTTAATGCTGGAATTAATTAATTTAAT
TATTCAACAAGAAACCCTAACCAGTGAAAAGTCTATGTTAAGGCTGATTT
CCTTTCGAAATTGACTCATTGTGTGTTTTTATCACCTTAGATTTTGAAGC
TAAGAGAATTTAAATCTGCATCTTGTTGCCCTTTATTCAAAAAATAATAA
ACTTATTATATTTGATATATTTTAGTGAGCCTGTTCCAGAAAGGAATGCA
TCAAACGACATGACAGAGTTGTTAGGCTTGACTGCACTGAATGTCAAAAC
CATTCAATTGTCTAAGAAATATCTCGAACACATTGTAAAGGAAGGATATT
ACATTTCTGGCTTCATAGATGGTACTGATAAATTGGATGAATTTCTGAAG
TTCTTTCGAATCATCACAGGGTCGGCATTTTCGATTCGTAGGTCAAAGTC
CAAAATTAATGATGACCCAGAACCAGAGGATAAGCCTCTTCGTAAATACA
AGCCAGGTTATCTTGGAAAAGGTATGTGCCAGTTTTAGTAGTAGTGTAGT
AGTTTGACCAAATTTCTCCTCTCCCTCTGATTCAAACAAATAAATCTTGG
TGATTGCTTCTGAGGTGATGGCTTAGAATGTTAGAAATGTGAAAAAAAAC
AAGAATTTCCAAAACATGATTTATGTCAGTGTTAAAAGTTCTTCCGTCTC
AAACTGATTCCCGTCTCAGAAAAAGGTTTTTTTCTTCTGTATAATTCACT
AAAATTCCAAGGATAAATATGTGCTAATTTGCTGTGTAAAACCCATAAAT
TCCTTCACAGGAGAAGAACTTTGCTTTGAACACTGCTATTGGATCACACA
CTTTTTTTCATTTCTAACAACCAGGTCAAATCAAATGGGAAAAGAATATT
GGGGTACCTCCGATCCCATTTACCGGTGTTCCTTTCACAACTGAAGGCAG
TACCACTTATCAATGTGTATTTGGACCTAAAAGAGCTAAAATGTCGAAGG
AGAACAACGATGTTGAAGAAGATGATGTAAGTTTTGGTGGGAAGAAAGTT
TGGCTAATTTCGTTCCCGCTGTAATTAATTTTTTCGGAAATCCGCCAAAG
TAAATTCCCGCCAAATTTAAATTATTTTATTCATTTCCTAAAATGTGTGA
TATTTCAGGCCTGAAAACAGTTTTTATGTTTAAATTCCTGTCAAAAATTT
TGGCGTAATGGTATTTGTACTTGGAACAAGTGAACAGTTTTTAATTAAAC
TCTATTTCCTCTCTTTCATAAATTTGAACGGGGAAGCAGCTAAACAGCTC
TCGAAATTACATTAGTCACAAATGGTATAAGTTTACAGTCACAATCCTTA
TTTTTCTAACAACTGTTTCTTTGCGATTTAGACGTTCCATTTGTTTTCAT
TTGTAATCAGGCTGCTGGCATCCACTATGTACCGGATTCGCCTTTTCCTT
ATATTTTACCTGTTTTGTAGAGGTCGGCGATTTAGACTAATTTGTAATCA
CAATAAATATTTGTATATTTTTACAAGGTCTGTGATTTGGATACACCAAG
CAAGAGACGGAAATCTATTCGAGAATCAAAGAAAAAGGATTGCCCAGCAC
AAATTCACATACGAACTGTACATCGTTTCCCAACATATAATTGCATCAAT
AACATTCAACCAGTGAAATCAGAATCTCGAACAACATATGTCAATAAATG
TCAACGTGGTATGATTTTAGCGAAATTACGGGAGGACATTGTTAATGATC
AGGTTCATGGTGAACAAGGCTTTTGGATTCGTGTTCCTTTACCAGAAGTT
CACCAGAACCATTCTCTTGGGCCTTTTGATGGTGATGATCCACCCTTAAC
TGAAGACACTATTCTGGAAATGAAAACCTTACTTCATGATGCTGCGATTT
CTTCTACTTCATAA Coding sequence (CDS) from alignment at sc0000023_pilon:1330714..1333777- >XLOC_007093 ID=XLOC_007093|Name=XLOC_007093|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3462bp|location=Sequence derived from alignment at sc0000023_pilon:1330714..1333777- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGACGGCAAGAAAACTAACCAAAAGTATCGATGACCTTTCTAGCAG
TGAAGCTTCAGCTGCTGAAATCATCTCAAAAATGTCAGAATACCAATTTA
TAGCTGTTGTCCAAGATGGAAATGCATGCGAGCCTATGGAGCAAGTCGTG
AATGAAAAAGGTGAGGTAGTTGCTATAAATACAGATGAATATTATGAGAC
AATAGGACAAGCAGTACCTGTCGAGTTGAATTTTGAATCCGCTGATGCAG
GAATTAACGAATTAAAGAGACAAAACGGTGAAGGAATAAAAGAGGCTGAT
TCTAATGAAGAAGTGATTGCTCAGGAAGAGACTATTGAAAATGTTGAACA
GGATGAAGGGGTAGAATCAGTTCCATCGGATGCTGAAATTATTGCAAGAA
TGGTTGTTGAGCGTGAACAACTACAAGGTAACAATGAAAATGTAGCTGGG
AATTTGAAGGATATGTTGCTGCCACTTGGTATAAAAATACCAAATCATCA
GAATATTATTGGAACTAAAAGAAAACGACCTAAAAGTTCCTTGTTTATTG
GATGTTCACCTGAAGCAACTCAAGTAATCAATGAATTTGATGCTCTTAAA
GAACGCCTTCAGATCAAAACAAATTTAGACATGCTAAAACATATGCTGAA
GCTTGAAAAGAAATACTTAAATTCCACTGTTGTTACTACTGAGTGCATTG
TTGACGATGGCAACAAAAATACAAAGGCTATTTTGCAACTTCTGTCGACG
TCGTCAGCAGCCACTGACCATCATCAAACAAAAACATTGGATAATGAGAT
AATAACACCACGGTTAGCAACAGATGAGCTGCATGGCAGTGATACGATGG
AACCATCAGGCATAAGAAATGAAGAAGTCACAATTAATATAATGAAATGG
CGACGGCAAGAAAACTAACCAAAAGTATCGATGACCTTTCTAGCAGTGAA
GCTTCAGCTGCTGAAATCATCTCAAAAATGTCAGAATACCAATTTATAGC
TGTTGTCCAAGATGGAAATGCATGCGAGCCTATGGAGCAAGTCGTGAATG
AAAAAGGTGAGGTAGTTGCTATAAATACAGATGAATATTATGAGACAATA
GGACAAGCAGTACCTGTCGAGTTGAATTTTGAATCCGCTGATGCAGGAAT
TAACGAATTAAAGAGACAAAACGGTGAAGGAATAAAAGAGGCTGATTCTA
ATGAAGAAGTGATTGCTCAGGAAGAGACTATTGAAAATGTTGAACAGGAT
GAAGGGGTAGAATCAGTTCCATCGGATGCTGAAATTATTGCAAGAATGGT
TGTTGAGCGTGAACAACTACAAGGTAACAATGAAAATGTAGCTGGGAATT
TGAAGGATATGTTGCTGCCACTTGGTATAAAAATACCAAATCATCAGAAT
ATTATTGGAACTAAAAGAAAACGACCTAAAAGTTCCTTGTTTATTGGATG
TTCACCTGAAGCAACTCAAGTAATCAATGAATTTGATGCTCTTAAAGAAC
GCCTTCAGATCAAAACAAATTTAGACATGCTAAAACATATGCTGAAGCTT
GAAAAGAAATACTTAAATTCCACTGTTGTTACTACTGAGTGCATTGTTGA
CGATGGCAACAAAAATACAAAGGCTATTTTGCAACTTCTGTCGACGTCGT
CAGCAGCCACTGACCATCATCAAACAAAAACATTGGATAATGAGATAATA
ACACCACGGTTAGCAACAGATGAGCTGCATGGCAGTGATACGATGGAACC
ATCAGGCATAAGAAATGAAGAAGTCACAATTAATATAATGAATGAGCCTG
TTCCAGAAAGGAATGCATCAAACGACATGACAGAGTTGTTAGGCTTGACT
GCACTGAATGTCAAAACCATTCAATTGTCTAAGAAATATCTCGAACACAT
TGTAAAGGAAGGATATTACATTTCTGGCTTCATAGATGGTACTGATAAAT
TGGATGAATTTCTGAAGTTCTTTCGAATCATCACAGGGTCGGCATTTTCG
ATTCGTAGGTCAAAGTCCAAAATTAATGATGACCCAGAACCAGAGGATAA
GCCTCTTCGTAAATACAAGCCAGGTTATCTTGGAAAAGTGAGCCTGTTCC
AGAAAGGAATGCATCAAACGACATGACAGAGTTGTTAGGCTTGACTGCAC
TGAATGTCAAAACCATTCAATTGTCTAAGAAATATCTCGAACACATTGTA
AAGGAAGGATATTACATTTCTGGCTTCATAGATGGTACTGATAAATTGGA
TGAATTTCTGAAGTTCTTTCGAATCATCACAGGGTCGGCATTTTCGATTC
GTAGGTCAAAGTCCAAAATTAATGATGACCCAGAACCAGAGGATAAGCCT
CTTCGTAAATACAAGCCAGGTTATCTTGGAAAAGGTCAAATCAAATGGGA
AAAGAATATTGGGGTACCTCCGATCCCATTTACCGGTGTTCCTTTCACAA
CTGAAGGCAGTACCACTTATCAATGTGTATTTGGACCTAAAAGAGCTAAA
ATGTCGAAGGAGAACAACGATGTTGAAGAAGATGATGTCAAATCAAATGG
GAAAAGAATATTGGGGTACCTCCGATCCCATTTACCGGTGTTCCTTTCAC
AACTGAAGGCAGTACCACTTATCAATGTGTATTTGGACCTAAAAGAGCTA
AAATGTCGAAGGAGAACAACGATGTTGAAGAAGATGATGTCTGTGATTTG
GATACACCAAGCAAGAGACGGAAATCTATTCGAGAATCAAAGAAAAAGGA
TTGCCCAGCACAAATTCACATACGAACTGTACATCGTTTCCCAACATATA
ATTGCATCAATAACATTCAACCAGTGAAATCAGAATCTCGAACAACATAT
GTCAATAAATGTCAACGTGGTATGATTTTAGCGAAATTACGGGAGGACAT
TGTTAATGATCAGGTTCATGGTGAACAAGGCTTTTGGATTCGTGTTCCTT
TACCAGAAGTTCACCAGAACCATTCTCTTGGGCCTTTTGATGGTGATGAT
CCACCCTTAACTGAAGACACTATTCTGGAAATGAAAACCTTACTTCATGA
TGCTGCGATTTCTTCTACTTCATAAGTCTGTGATTTGGATACACCAAGCA
AGAGACGGAAATCTATTCGAGAATCAAAGAAAAAGGATTGCCCAGCACAA
ATTCACATACGAACTGTACATCGTTTCCCAACATATAATTGCATCAATAA
CATTCAACCAGTGAAATCAGAATCTCGAACAACATATGTCAATAAATGTC
AACGTGGTATGATTTTAGCGAAATTACGGGAGGACATTGTTAATGATCAG
GTTCATGGTGAACAAGGCTTTTGGATTCGTGTTCCTTTACCAGAAGTTCA
CCAGAACCATTCTCTTGGGCCTTTTGATGGTGATGATCCACCCTTAACTG
AAGACACTATTCTGGAAATGAAAACCTTACTTCATGATGCTGCGATTTCT
TCTACTTCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:1330714..1333777 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1345-1731:388 |
| Aaloc | 1195-1344:1039 |
| Aaloc | 898-1191:1689 |
| Aaloc | 1-894:3065 |
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