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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:1421899..1424651+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007080 ID=XLOC_007080|Name=XLOC_007080|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2753bp|location=Sequence derived from alignment at sc0000023_pilon:1421899..1424651+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACATCTACGGAGGAGAGCAAGGATGTAGAGTTTGACTATGGTGATGA
ATTCTTTACCAAATCAGCCCAAGATACTGTTGAATCTCAAGATGCAGATC
CTGCACAGCTGACAGAGACAAATACATCCGTCGAGAGCAAAGAAGAGTTG
AATCAAAACAGGATTGAGAATAAATTACCTGAGTTAGAAATTACTGATCA
TGAACAAGATGTAATGAAATCTACTGGTGAAAAACAAGCTTCCATCAACG
ATATCACATCGGAGCCTGGTGAATCACCAGAAACTGAGGAGGCCAGGGTT
GAAACGAATGCTGAATCTGATGGTGAAGTTGATGAATGGGATGAACTGCA
ACTGGATCCTAAAAATTGTAGGTGTATAGTTAAACAGAAATTTACTCTTT
CAATGAAATCAGAGTCCAATATcattatttgaaagtttcttagaaatttt
tcaaaatatcatatTCCTTTATTCACTAGATAGGCTATAACTGCTCACAT
GTTTCTGTGTCAAAATCCACCCGTGCTCatttatattttccaaaatgaCT
TTTCAATCAAATTACTGCTTTTCTTTCAGCTGCCGAAAATCCTGAAAACA
TGACATCTCCAATGGAATTCAAAGAAGCTTTGCAATTCTTCGAAAACATC
GATCTCAACCAATACGCTGATAAAATACGAACAGCTCCAAAAAGATCTGG
GATTTCTTCAGTCTTTCATAACATTGTTGGACCACCGAAACTTCACAAAT
CACTAGTCCCTGAACGCAATTTGATATTCACTCTAGCCTTGATACCATTT
CAAAATGATGAACTGGTGCACGTTCGGATATTACAGACATTATATAAATC
ATTATCCAACAGGAAATTTGATTGTCCACGTTTTGGCCCTCATTGGGAAC
TGATCGGGTTTCAAGGTAAGCGAGTAATAATAATTTtgtaagaacacgag
gctgactATGGTTTCAGGTTATTTTAATCTTcaggtaaaaaaaacaaaac
taataaaaacgTTGTAAGAACGTAGATGACGACGTagtcttttatacgga
aacacccgaaaacacGGGGCATTTGTcaccagttttgaatttaaactatT
AAACTGATGGCAAAcaccatagtgtcctcccccctggattcagggggggg
aatgggttttgaggtcaaaaggacgtataggggggaaagaattttttttg
tagcCAGGGTGGGGGAAAACGATgggggggggaatggaaaattttcattc
taggcatggggggaactcaccaaaatcaattcaaaattgaaaaacatctg
gttttattcatttatttcaaccagCAATATTAcggtttaaaaacaaccat
cctttccatttattcttgaattagaactaccttagggaaaacaataagcg
ttaaattcatcaaattacagctttttatgcgtgaggggggggggacagag
aaatttttggaggcagggtggggaagAATGAGGGGgtgatggaaaatttt
cattctaggcatggggggggagacaccctgaaggacactatgaaCACTCG
CTGTATTTcgtgtgtttccgtataaaagattacgtcatgaatataaaaaa
ttaagaacatcgagCAGCAGTTTTAGTCCTAGACCAGTAGTTAGTGTATT
CCCCTTCTTGAAGTGTATTTTTTAGTATTATCGACTCATTTCTTTCAAAC
CTAGCAAATCAGAGGAAAGGAGAACAGTTGTtacactttgttttttttca
ccttaTAGGTAATGACCCTTCAACAGATCTCCGTGGCTGTGGAATGCTTG
GCTTGTTAACAACTCTTCACTTTGTTACATCATCTAACACCAAAACGCTA
GCTTCAAACATTTATCAACTATCACGTCATGAGAttcaaaatttcccttt
ttGCGTGATGTCTATCAATATCACACGCATCTCTTTACAAGTGCTTCGTA
GTGGGAAAATTAACAAGTAAGTCGTTTGTACGTATCGTCAAATAAAGGTA
GTCTGATGATAGCTCTAgcactttttaacaaaaatggAAATTATTCTTTT
CTATGTAATTCATGAcatttatgacgtattgttttatacggaagcactcA
AAAAAGACCGAgtgtttgccactaattttgaaCTTGAACAATAAAACTAG
TAGCCAACGCTCAGGCTATTTTCGATgcaaacattacgtaatgaatacCA
TGAATCCTGATGAGTGATTTCTTGTTAGGTATCTTTATTTCACTGATAAA
CGTACTTGTCCTTAAgttattttcgaaaatcctgGTTATAAATTGTACTT
TGGACATAAACTGGTCTGGCCCAATGATGCGAGAGGAATTTCTGGAAACG
TAGCCAAATGTAAATTTCGTGATTCAAGCAACGATAaccttcaaaaatgg
tctaatCATCCttctatttttgtttcagagAGTGCAACCAGCGTTTAAAA
CAAAGACATAAATCGAAACAGAAATATACTAACGACATAGACCTTACGGT
TTACGATGTTTTTCAAGAACTTTACGAAGCCATATTCTACAAATTATATA
CAGTTTGGAAGAACGAAGGAAAAACAATGACAGAGTCTGGTTTCGTCATA
AGAGATATTGAAACATTAGCCAAACAAAAACCAATGGATTTATTGAAAAA
CTATAGGAAAAGACTTTCTTCTGAAGGAAGCAAGAAGAAAAATGGTGGAA
ACCAGAATGAAGAGAAAATCGAATCCTTTGTAGGAATTGAAGACTTAGGA
TGA Coding sequence (CDS) from alignment at sc0000023_pilon:1421899..1424651+ >XLOC_007080 ID=XLOC_007080|Name=XLOC_007080|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2472bp|location=Sequence derived from alignment at sc0000023_pilon:1421899..1424651+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACATCTACGGAGGAGAGCAAGGATGTAGAGTTTGACTATGGTGATGA
ATTCTTTACCAAATCAGCCCAAGATACTGTTGAATCTCAAGATGCAGATC
CTGCACAGCTGACAGAGACAAATACATCCGTCGAGAGCAAAGAAGAGTTG
AATCAAAACAGGATTGAGAATAAATTACCTGAGTTAGAAATTACTGATCA
TGAACAAGATGTAATGAAATCTACTGGTGAAAAACAAGCTTCCATCAACG
ATATCACATCGGAGCCTGGTGAATCACCAGAAACTGAGGAGGCCAGGGTT
GAAACGAATGCTGAATCTGATGGTGAAGTTGATGAATGGGATGAACTGCA
ACTGGATCCTAAAAATTATGACATCTACGGAGGAGAGCAAGGATGTAGAG
TTTGACTATGGTGATGAATTCTTTACCAAATCAGCCCAAGATACTGTTGA
ATCTCAAGATGCAGATCCTGCACAGCTGACAGAGACAAATACATCCGTCG
AGAGCAAAGAAGAGTTGAATCAAAACAGGATTGAGAATAAATTACCTGAG
TTAGAAATTACTGATCATGAACAAGATGTAATGAAATCTACTGGTGAAAA
ACAAGCTTCCATCAACGATATCACATCGGAGCCTGGTGAATCACCAGAAA
CTGAGGAGGCCAGGGTTGAAACGAATGCTGAATCTGATGGTGAAGTTGAT
GAATGGGATGAACTGCAACTGGATCCTAAAAATTCTGCCGAAAATCCTGA
AAACATGACATCTCCAATGGAATTCAAAGAAGCTTTGCAATTCTTCGAAA
ACATCGATCTCAACCAATACGCTGATAAAATACGAACAGCTCCAAAAAGA
TCTGGGATTTCTTCAGTCTTTCATAACATTGTTGGACCACCGAAACTTCA
CAAATCACTAGTCCCTGAACGCAATTTGATATTCACTCTAGCCTTGATAC
CATTTCAAAATGATGAACTGGTGCACGTTCGGATATTACAGACATTATAT
AAATCATTATCCAACAGGAAATTTGATTGTCCACGTTTTGGCCCTCATTG
GGAACTGATCGGGTTTCAAGCTGCCGAAAATCCTGAAAACATGACATCTC
CAATGGAATTCAAAGAAGCTTTGCAATTCTTCGAAAACATCGATCTCAAC
CAATACGCTGATAAAATACGAACAGCTCCAAAAAGATCTGGGATTTCTTC
AGTCTTTCATAACATTGTTGGACCACCGAAACTTCACAAATCACTAGTCC
CTGAACGCAATTTGATATTCACTCTAGCCTTGATACCATTTCAAAATGAT
GAACTGGTGCACGTTCGGATATTACAGACATTATATAAATCATTATCCAA
CAGGAAATTTGATTGTCCACGTTTTGGCCCTCATTGGGAACTGATCGGGT
TTCAAGGTAATGACCCTTCAACAGATCTCCGTGGCTGTGGAATGCTTGGC
TTGTTAACAACTCTTCACTTTGTTACATCATCTAACACCAAAACGCTAGC
TTCAAACATTTATCAACTATCACGTCATGAGAttcaaaatttcccttttt
GCGTGATGTCTATCAATATCACACGCATCTCTTTACAAGTGCTTCGTAGT
GGGAAAATTAACAAGTAATGACCCTTCAACAGATCTCCGTGGCTGTGGAA
TGCTTGGCTTGTTAACAACTCTTCACTTTGTTACATCATCTAACACCAAA
ACGCTAGCTTCAAACATTTATCAACTATCACGTCATGAGAttcaaaattt
ccctttttGCGTGATGTCTATCAATATCACACGCATCTCTTTACAAGTGC
TTCGTAGTGGGAAAATTAACAAagAGTGCAACCAGCGTTTAAAACAAAGA
CATAAATCGAAACAGAAATATACTAACGACATAGACCTTACGGTTTACGA
TGTTTTTCAAGAACTTTACGAAGCCATATTCTACAAATTATATACAGTTT
GGAAGAACGAAGGAAAAACAATGACAGAGTCTGGTTTCGTCATAAGAGAT
ATTGAAACATTAGCCAAACAAAAACCAATGGATTTATTGAAAAACTATAG
GAAAAGACTTTCTTCTGAAGGAAGCAAGAAGAAAAATGGTGGAAACCAGA
ATGAAGAGAAAATCGAATCCTTTGTAGGAATTGAAGACTTAGGATGAagA
GTGCAACCAGCGTTTAAAACAAAGACATAAATCGAAACAGAAATATACTA
ACGACATAGACCTTACGGTTTACGATGTTTTTCAAGAACTTTACGAAGCC
ATATTCTACAAATTATATACAGTTTGGAAGAACGAAGGAAAAACAATGAC
AGAGTCTGGTTTCGTCATAAGAGATATTGAAACATTAGCCAAACAAAAAC
CAATGGATTTATTGAAAAACTATAGGAAAAGACTTTCTTCTGAAGGAAGC
AAGAAGAAAAATGGTGGAAACCAGAATGAAGAGAAAATCGAATCCTTTGT
AGGAATTGAAGACTTAGGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:1421899..1424651 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 913-1236:2430 |
| Aaloc | 706-909:1761 |
| Aaloc | 370-702:582 |
| Aaloc | 1-366:1 |
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