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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:1416939..1419129+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007079 ID=XLOC_007079|Name=XLOC_007079|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2191bp|location=Sequence derived from alignment at sc0000023_pilon:1416939..1419129+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAAAAAATCAATTAACTTCAACACAATCACTCTACAAGAGCTTGA
AAAGATCCCTGGTATTGGAAAGTTTAAAGCCCAATCACTGGTTGATGAAC
GAAACCATAGATTGTTTAAGAACATAAATGACTTGATCAAAGTTGAAGGA
CtcactttgttatttttaaacagACTTCAGAACAAATTTGACTTTATTTT
CGATACACAATCACCATGCAAAACAAATGCTCTAAAAAGGAAAACCGAAA
ATGTAGATACTTCAATTGATGAAAAAGACAATGGGATCACAACACCAGAG
AAGAAAGCCAGACCAAAATATAACAATAAATGTGCTTCAACTTCCAGCTC
AAAGATTGTCCCAAATGTGGAGAATGCTCTTTGTAATAGAACTATACCTT
CATGTGATAGTCCTGGAAAAGCAGTACGTAGTAGGCTTCAATCAGAAACA
GCTAAGCCACCTGATGGACTTCCAGATTGGTTGAATAAATTCCATGACTG
GTCCAGAGATGAGAGATTGATTGCGTTAAATGACTTGATAGGTTTATGTG
ATATGTCGGTCGTCAGACACATGATGGCCAAAATTGAGCCACATTTTCAA
AGGGAttttatatctttattaccAAAAGAGCTGGCACTCTATGTTTTATC
TTTCTTGGAACCAAAAGATTTATCAAATGCTGCAAGGACTTGCAGATATT
GGAGGATCCTTGGAGAAGACAATCTGTAAGCCATCATCTTTTCTCTTTGT
TTGTTCTTTGATAGTGAAACTGAATTTTGTTTATGGCAGTGACAGTGTTA
GAATATAAATTGTTTTTCTATACTCtaaatttaaacaaaatgtGTTATTT
TTAGGTCAATTGATGCTATTAtaaaaaagcctaaattttcaGAAGGTTGA
AACCAATTATTATTCTTTCTTTAGGTTATGGAAGGAGAAATGCCATGAAT
ATCAGTTATTTTATCCTCTAAGTGATCTTTTAGAAGAAGGAAAGGTTGAT
AAGAAGGCATCACAACCTAATGAGGCACCTTACAAAGAACTTTTTGCTTA
TTGTCACAAATTGGAGCGGAATTGGAGATCAAACACTTTGAGGCCTGTCA
TGTATTTAAGAGGTCATGATGATCATGTTGTAACTTGCTTACAGTTCGAC
GGTGTTCGTATAGTCAGTGCCTCAGATGATAATACGTTAAAAGTGTGGTC
TGCTGATACTGGAACTTTGATTCGCACCCTTGTGGGACATACAGGTTTGg
attatttttatacaaaaaagcaTGAAATGGTCTTAAAATGTCTTATTGAA
ACTTCAACCAAGTGGGGTTGCCTATTTGATATGCGTAATTCTGTCACTTT
TATTATCCCACAATATATTTGACTGCTTCATGATATGTTTAGGACATTTT
TGAATAATGTTCTATAAATATTGAATTACTTCAAATAGGTGGTGTGTGGT
CATCACAATTAAGTGGAAATATAGTTGTGAGTGGCTCAACAGACAGGACG
CTGAGGGTCTGGAATGCTGATTCAGGAGAATGTATCCATGTTTTACAAGG
TCACACATCAACTGTTCGTTGCCTGGCAATGCATGGAGATAACGTAGTAA
GCGGATCCAGAGATGGAACTCTACGTGTCTGGGATGTCATGAAAGGAACA
CATCTTCATGTTTTGATTGGTCATGCAGCTGCTGTCAGATGGTAAAACTG
TTCTTAGACCCCACATCCAGGCTTTTGTGGTTTTGGTTACTTTCTCTGAT
TTTTCATAATATTTATAGCTCAACAACAAACAATTATTTAAGCATAgaat
tgtaaaaatttaaattgtgcTACACCGCAACTTTTTTCAACGTATTTCCA
CTCCAGTTGAAGCTCTCTCCTTAAAATCTTGCATCCATTTTTGCTAATGG
TGTGTATATTGATTCCATTATACTAGTTTTAgtaaagaaaacaagtttta
aagtTTATTCCATTATATTGATTTCATATATGATATTTATTTTCAACAGT
GTACAATACAATGGTAAATACGTTGTCAGCGGTGCTTATGATTATTTGGT
AAAAGTTTGGGATGTTGAAACAGAGACTTGTTTGCATACTCTGACTGGTC
ATTCAAATCGTGTCTACTCATTACAGTTTGATGGTAAATACATCGTGTCT
GGCTCTCTGGATACTTCGATACGTGTTTGGGATGCTCTTAG Coding sequence (CDS) from alignment at sc0000023_pilon:1416939..1419129+ >XLOC_007079 ID=XLOC_007079|Name=XLOC_007079|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2910bp|location=Sequence derived from alignment at sc0000023_pilon:1416939..1419129+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAAAAAATCAATTAACTTCAACACAATCACTCTACAAGAGCTTGA
AAAGATCCCTGGTATTGGAAAGTTTAAAGCCCAATCACTGGTTGATGAAC
GAAACCATAGATTGTTTAAGAACATAAATGACTTGATCAAAGTTGAAGGA
CtcactttgttatttttaaacagACTTCAGAACAAATTTGACTTTATTTT
CGATACACAATCACCATGCAAAACAAATGCTCTAAAAAGGAAAACCGAAA
ATGTAGATACTTCAATTGATGAAAAAGACAATGGGATCACAACACCAGAG
AAGAAAGCCAGACCAAAATATAACAATAAATGTGCTTCAACTTCCAGCTC
AAAGATTGTCCCAAATGTGGAGAATGCTCTTTGTAATAGAACTATACCTT
CATGTGATAGTCCTGGAAAAGCAGTACGTAGTAGGCTTCAATCAGAAACA
GCTAAGCCACCTGATGGACTTCCAGATTGGTTGAATAAATTCCATGACTG
GTCCAGAGATGAGAGATTGATTGCGTTAAATGACTTGATAGGTTTATGTG
ATATGTCGGTCGTCAGACACATGATGGCCAAAATTGAGCCACATTTTCAA
AGGGAttttatatctttattaccAAAAGAGCTGGCACTCTATGTTTTATC
TTTCTTGGAACCAAAAGATTTATCAAATGCTGCAAGGACTTGCAGATATT
GGAGGATCCTTGGAGAAGACAATCTATGGCTAAAAAATCAATTAACTTCA
ACACAATCACTCTACAAGAGCTTGAAAAGATCCCTGGTATTGGAAAGTTT
AAAGCCCAATCACTGGTTGATGAACGAAACCATAGATTGTTTAAGAACAT
AAATGACTTGATCAAAGTTGAAGGACtcactttgttatttttaaacagAC
TTCAGAACAAATTTGACTTTATTTTCGATACACAATCACCATGCAAAACA
AATGCTCTAAAAAGGAAAACCGAAAATGTAGATACTTCAATTGATGAAAA
AGACAATGGGATCACAACACCAGAGAAGAAAGCCAGACCAAAATATAACA
ATAAATGTGCTTCAACTTCCAGCTCAAAGATTGTCCCAAATGTGGAGAAT
GCTCTTTGTAATAGAACTATACCTTCATGTGATAGTCCTGGAAAAGCAGT
ACGTAGTAGGCTTCAATCAGAAACAGCTAAGCCACCTGATGGACTTCCAG
ATTGGTTGAATAAATTCCATGACTGGTCCAGAGATGAGAGATTGATTGCG
TTAAATGACTTGATAGGTTTATGTGATATGTCGGTCGTCAGACACATGAT
GGCCAAAATTGAGCCACATTTTCAAAGGGAttttatatctttattaccAA
AAGAGCTGGCACTCTATGTTTTATCTTTCTTGGAACCAAAAGATTTATCA
AATGCTGCAAGGACTTGCAGATATTGGAGGATCCTTGGAGAAGACAATCT
GTTATGGAAGGAGAAATGCCATGAATATCAGTTATTTTATCCTCTAAGTG
ATCTTTTAGAAGAAGGAAAGGTTGATAAGAAGGCATCACAACCTAATGAG
GCACCTTACAAAGAACTTTTTGCTTATTGTCACAAATTGGAGCGGAATTG
GAGATCAAACACTTTGAGGCCTGTCATGTATTTAAGAGGTCATGATGATC
ATGTTGTAACTTGCTTACAGTTCGACGGTGTTCGTATAGTCAGTGCCTCA
GATGATAATACGTTAAAAGTGTGGTCTGCTGATACTGGAACTTTGATTCG
CACCCTTGTGGGACATACAGGTTATGGAAGGAGAAATGCCATGAATATCA
GTTATTTTATCCTCTAAGTGATCTTTTAGAAGAAGGAAAGGTTGATAAGA
AGGCATCACAACCTAATGAGGCACCTTACAAAGAACTTTTTGCTTATTGT
CACAAATTGGAGCGGAATTGGAGATCAAACACTTTGAGGCCTGTCATGTA
TTTAAGAGGTCATGATGATCATGTTGTAACTTGCTTACAGTTCGACGGTG
TTCGTATAGTCAGTGCCTCAGATGATAATACGTTAAAAGTGTGGTCTGCT
GATACTGGAACTTTGATTCGCACCCTTGTGGGACATACAGGTGGTGTGTG
GTCATCACAATTAAGTGGAAATATAGTTGTGAGTGGCTCAACAGACAGGA
CGCTGAGGGTCTGGAATGCTGATTCAGGAGAATGTATCCATGTTTTACAA
GGTCACACATCAACTGTTCGTTGCCTGGCAATGCATGGAGATAACGTAGT
AAGCGGATCCAGAGATGGAACTCTACGTGTCTGGGATGTCATGAAAGGAA
CACATCTTCATGTTTTGATTGGTCATGCAGCTGCTGTCAGATGGTGGTGT
GTGGTCATCACAATTAAGTGGAAATATAGTTGTGAGTGGCTCAACAGACA
GGACGCTGAGGGTCTGGAATGCTGATTCAGGAGAATGTATCCATGTTTTA
CAAGGTCACACATCAACTGTTCGTTGCCTGGCAATGCATGGAGATAACGT
AGTAAGCGGATCCAGAGATGGAACTCTACGTGTCTGGGATGTCATGAAAG
GAACACATCTTCATGTTTTGATTGGTCATGCAGCTGCTGTCAGATGTGTA
CAATACAATGGTAAATACGTTGTCAGCGGTGCTTATGATTATTTGGTAAA
AGTTTGGGATGTTGAAACAGAGACTTGTTTGCATACTCTGACTGTGTACA
ATACAATGGTAAATACGTTGTCAGCGGTGCTTATGATTATTTGGTAAAAG
TTTGGGATGTTGAAACAGAGACTTGTTTGCATACTCTGACTGGGTAAATA
CATCGTGTCTGGCTCTCTGGATACTTCGATACGTGTTTGGGATGCTCTTA
GGGTAAATACATCGTGTCTGGCTCTCTGGATACTTCGATACGTGTTTGGG
ATGCTCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:1416939..1419129 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1399-1455:2135 |
| Aaloc | 1300-1395:2001 |
| Aaloc | 1048-1296:1441 |
| Aaloc | 727-1044:926 |
| Aaloc | 1-723:1 |
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