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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:1382575..1386410+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_007078 ID=XLOC_007078|Name=XLOC_007078|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3836bp|location=Sequence derived from alignment at sc0000023_pilon:1382575..1386410+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTAGTCATTTGGTTttattttcttcgatttttttgTTGATCGATGG
ATACAAATTACCATATCAGATACCTGGACCCAGATCTTTGGACGACAAAA
TCGCCATTGTTGGGGCGGGACCAGCTGGAATTCACATGGCATTACTACTG
AAAGAGAAAGGTTTTGCCAATATTGAAATCTTGGAAAAATCAGATCGAAT
CGGTGGTAAATCGAACTCAATCCAAGATCGAGGAACTGTCCATGAACTAG
GCACTGTCTATTTATCGAAAGATTACCAGATGATTAAAGATTTAAGTGAG
AAATACGTGCCAGGAGATACAAGTCCCTTTCCACCAGCCTCTGTTTGGTT
GGATAACATGACGGCGCCGATACCTTTTACAACGTACGCTGGAGGTTTTG
TTGCAAAAACTTTGGGCATTACTGACCAACAAGCAATCATGATGGAGATA
TTGAGAGCGTTGACGAGATACCAGGAATTACATCGAGAAATCTTTGGTGA
ATATACTGGTGAACTGATGCCACAACCTTCCAAAGAGGTTGGTTTGAATT
TTTATATTCAAATTCTTAAAAGCTTTTTCTACTAACTTCACAATGTGTAG
CAGGCCTGGTCGAGCTCCTTCCCTGCGGGGAAAAACTTTGCCAAGAAAAT
GTCTTGGTTTGGTAAGAGAAATAGCCTGAAATTCACTTCCGAGTGGAAGT
CTCAATCTCAGTGGGCAAAGCCAAGATCTTCCATCCTCGTTGGCTTTTAG
CTCGACTTTATCCCTTATCTTCCTTATCTcactactcttaggtgccaaat
aaacaggggggttggaaaattttcaaaattttaataaacgggggggggga
aactaattgccgggggggttggaaattgtacttatgaaaacccaaaaata
aggtaaatatagtctaaaatcaggctttttggagcaaaataaggggcctt
catTTTGCcaattgaaaatattcttagaaattaataaacggggggggggt
cctaataaggtccggggggttggaaaattttcgaaaaattaacaagcggg
ggggggggcgtttatttggcacctaagagtatgtaACCAAGACAGTAAAG
CAGTGcttgaaaaaagatgaaaaattaatcCTATAATCCTTCATTCAAAT
TTTATGGTGAAGAAGCCCTATAGTATTTCACAACCCAGtcattttcactt
ttgtttgattttacagAACATGGAAAAAATTCGAGGGACGTTCTTAGAAT
TTATCATAAGGAACGGCCTTCAAGCACTTGTTCCGTTATTTCAAGCGTCC
ACAACATTTCAAGGATACGGACATATCGATGAAGTAGCAGCTCTATATGG
ATTAATGTGGAATACGCCGAATTTCATCAATGGCTTTAAAGAACGACTTG
CTGGTAAAGGCTTTGGAGGTATGTAGAATCTTATCTCGTACCAAAGGCCA
CTTAaaacactttttgattttactaacGTCCCACGTGATACGATAGAcct
ttttaaagggacataacagtacttgctaaatttgtaaacaaactgtatgc
tgcggatacaaaatcaaaacaaatgtcacatgtcaaaaaaaaaatcaaac
caaatatggctaattttgattgttcaattgttttacaagtttgttttgga
cacgtgattttaattgttctctttaatgacacgtggttcgcgcaatgttt
acattttactactttaatgtccctttaatagggaggttaagtatcaaaga
taaatcaacGCGACGAACAAACGGGTTTTGACCCgcaacctgcagtaaac
atgtggacctgcattttctagaatccaggctaaaacagCTCAAGAACGAA
AAACCGTGAACATCTTCgttgctgaaaaaaaaagatataacatCTACTTT
GCTACCCTTAGCATCTTGCAGAGAAAAGGCCCGTTCGTCGcgtagattta
tctttgatacttaacctccctaataacTTACGTTTACCAACATCACTTgc
ttcgttttgaaattattgtcatggtgatttACTCCAAGcgggattttatt
aaaactattttgtattcatttaaaaatcatttaatgtctcaagggacata
atcaccatggcaattgtttgaatacgaggcaagtcaagcctgtgacgtaa
tttatgaaaaggtccattcgtgagcgctatcaaaatcataaaaaaagatc
TAAGaggctgggttcgagtttgtAGAATCTTAACAACTTTCGACctcatt
aaaatcaattttagattttgatttgGGGGTGTGGGTAGCATTCGGGCGTA
GTAGTCAAGAGTTTAATTGGAGCTCACAAAAAATGACTTCAATGTGCCAA
AGAATTGatggaaaatggacaaaaatcttttcttaTGGGTGCcaagagaa
acttttttatttttgtcgctttttttCCTGAACTACAGTGGAATACGAGC
AAATGTCCTCGTTCCTTCAAACAATGCCTTATATAAATTTGCAGGCCAAT
CTcacacttatttctaccatatgtgtaaatatgtaaaaatcgtatatcta
ccatatgtgtggatattagaatccgtaaatctaccatatgtgcaGAAATG
TAAAAATCCATAAATCTACCATATTAGTAGTTAAGGTATAAATACTATCC
AGACAAtttaaaaagaatgacaaataactattaaaaagcgacaaaccTAA
CCATAACTATCAAAGAACCATAAATTTGTCGTCCTCTAactaatcctcac
tgcaaagtattatgctattttttaaCATCCTCTCTAAATTTTCTgactga
aaacaaaataatttaaatccccggtcataaaaaatacgggattatcaatc
cccattgagtttcagtccgttatttttacccccactggctgaaaaaatcc
taccgggtctgtgagaagggggtgttaaattctataattcgaacaaattt
aaGTTCCCCGTGCGCGTTCGAGCTCGAGCTATAGAGGCTTCACAGTAGCa
ctcttttaaaatttatagaTATGAACATACTGAAGTCAGGATTCCAAAAC
TTGTGGGAAACAATCGTCAACAAAGAAAACCTACGTGTCACATTCAATGT
AGATATTCTGAAGATCTATCGACCAATCACATCCGTTTATAAAACCAACC
AACCTCTCAAAGAATCAAAATGTCGACAAGTGTGGATCGCTAAAAGGACT
GGAAACGAGGCTTTACCCACATGGGAGAAATACAATTTCCTTATATGGAG
TCCGGAAATGAAGGATAGTCTACACCTATGGAAAGAGACCGTAGACAAGG
AAATCGACCTGTTTTCAAAGACCATGGAAAGTTATTTTACAGCATCGGTC
GTGGATACTAGAAATATGGTTCGAGGACAAACACCGATCGACTATTGGGT
GGACAATGTGGTCAAAAAACGAGATCACAGCGTATGGGCTCAAAGGGATT
CTTACGGTGTTATTAACAGACATATGGGACCTGGTTATCAGTCAGGTAGT
CTACCCACTGGTGATGATGGTGACGAGAAACGAACAACAGTGGTCTATCA
AATGAGTCGAAATATCCCGTCCGAAtcttatttgaaaaagaaactacGCA
AACATTTGGACACTCTGAACGCTCaagatttgaatattaaacAGTTTAAA
ACATGGAGATACTTTCCACACTATCAACCAAAGGATATTGAGGATGGTAT
TTTGTGGAAGATATTGGAGATTCAAGGACGTTTTAACATGTGGTATATTG
GCTCGTCTGTATCATTTGAAAGCGTCAAATCTGTAGTAGAATATAATAGC
TTGATTGTTGAAAATATGGAGCCTGTAGCAAGataa Coding sequence (CDS) from alignment at sc0000023_pilon:1382575..1386410+ >XLOC_007078 ID=XLOC_007078|Name=XLOC_007078|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3114bp|location=Sequence derived from alignment at sc0000023_pilon:1382575..1386410+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTAGTCATTTGGTTttattttcttcgatttttttgTTGATCGATGG
ATACAAATTACCATATCAGATACCTGGACCCAGATCTTTGGACGACAAAA
TCGCCATTGTTGGGGCGGGACCAGCTGGAATTCACATGGCATTACTACTG
AAAGAGAAAGGTTTTGCCAATATTGAAATCTTGGAAAAATCAGATCGAAT
CGGTGGTAAATCGAACTCAATCCAAGATCGAGGAACTGTCCATGAACTAG
GCACTGTCTATTTATCGAAAGATTACCAGATGATTAAAGATTTAAGTGAG
AAATACGTGCCAGGAGATACAAGTCCCTTTCCACCAGCCTCTGTTTGGTT
GGATAACATGACGGCGCCGATACCTTTTACAACGTACGCTGGAGGTTTTG
TTGCAAAAACTTTGGGCATTACTGACCAACAAGCAATCATGATGGAGATA
TTGAGAGCGTTGACGAGATACCAGGAATTACATCGAGAAATCTTTGGTGA
ATATACTGGTGAACTGATGCCACAACCTTCCAAAGAGATGTTTAGTCATT
TGGTTttattttcttcgatttttttgTTGATCGATGGATACAAATTACCA
TATCAGATACCTGGACCCAGATCTTTGGACGACAAAATCGCCATTGTTGG
GGCGGGACCAGCTGGAATTCACATGGCATTACTACTGAAAGAGAAAGGTT
TTGCCAATATTGAAATCTTGGAAAAATCAGATCGAATCGGTGGTAAATCG
AACTCAATCCAAGATCGAGGAACTGTCCATGAACTAGGCACTGTCTATTT
ATCGAAAGATTACCAGATGATTAAAGATTTAAGTGAGAAATACGTGCCAG
GAGATACAAGTCCCTTTCCACCAGCCTCTGTTTGGTTGGATAACATGACG
GCGCCGATACCTTTTACAACGTACGCTGGAGGTTTTGTTGCAAAAACTTT
GGGCATTACTGACCAACAAGCAATCATGATGGAGATATTGAGAGCGTTGA
CGAGATACCAGGAATTACATCGAGAAATCTTTGGTGAATATACTGGTGAA
CTGATGCCACAACCTTCCAAAGAGAACATGGAAAAAATTCGAGGGACGTT
CTTAGAATTTATCATAAGGAACGGCCTTCAAGCACTTGTTCCGTTATTTC
AAGCGTCCACAACATTTCAAGGATACGGACATATCGATGAAGTAGCAGCT
CTATATGGATTAATGTGGAATACGCCGAATTTCATCAATGGCTTTAAAGA
ACGACTTGCTGGTAAAGGCTTTGGAGAACATGGAAAAAATTCGAGGGACG
TTCTTAGAATTTATCATAAGGAACGGCCTTCAAGCACTTGTTCCGTTATT
TCAAGCGTCCACAACATTTCAAGGATACGGACATATCGATGAAGTAGCAG
CTCTATATGGATTAATGTGGAATACGCCGAATTTCATCAATGGCTTTAAA
GAACGACTTGCTGGTAAAGGCTTTGGAGaTATGAACATACTGAAGTCAGG
ATTCCAAAACTTGTGGGAAACAATCGTCAACAAAGAAAACCTACGTGTCA
CATTCAATGTAGATATTCTGAAGATCTATCGACCAATCACATCCGTTTAT
AAAACCAACCAACCTCTCAAAGAATCAAAATGTCGACAAGTGTGGATCGC
TAAAAGGACTGGAAACGAGGCTTTACCCACATGGGAGAAATACAATTTCC
TTATATGGAGTCCGGAAATGAAGGATAGTCTACACCTATGGAAAGAGACC
GTAGACAAGGAAATCGACCTGTTTTCAAAGACCATGGAAAGTTATTTTAC
AGCATCGGTCGTGGATACTAGAAATATGGTTCGAGGACAAACACCGATCG
ACTATTGGGTGGACAATGTGGTCAAAAAACGAGATCACAGCGTATGGGCT
CAAAGGGATTCTTACGGTGTTATTAACAGACATATGGGACCTGGTTATCA
GTCAGGTAGTCTACCCACTGGTGATGATGGTGACGAGAAACGAACAACAG
TGGTCTATCAAATGAGTCGAAATATCCCGTCCGAAtcttatttgaaaaag
aaactacGCAAACATTTGGACACTCTGAACGCTCaagatttgaatattaa
acAGTTTAAAACATGGAGATACTTTCCACACTATCAACCAAAGGATATTG
AGGATGGTATTTTGTGGAAGATATTGGAGATTCAAGGACGTTTTAACATG
TGGTATATTGGCTCGTCTGTATCATTTGAAAGCGTCAAATCTGTAGTAGA
ATATAATAGCTTGATTGTTGAAAATATGGAGCCTGTAGCAAGataaaTAT
GAACATACTGAAGTCAGGATTCCAAAACTTGTGGGAAACAATCGTCAACA
AAGAAAACCTACGTGTCACATTCAATGTAGATATTCTGAAGATCTATCGA
CCAATCACATCCGTTTATAAAACCAACCAACCTCTCAAAGAATCAAAATG
TCGACAAGTGTGGATCGCTAAAAGGACTGGAAACGAGGCTTTACCCACAT
GGGAGAAATACAATTTCCTTATATGGAGTCCGGAAATGAAGGATAGTCTA
CACCTATGGAAAGAGACCGTAGACAAGGAAATCGACCTGTTTTCAAAGAC
CATGGAAAGTTATTTTACAGCATCGGTCGTGGATACTAGAAATATGGTTC
GAGGACAAACACCGATCGACTATTGGGTGGACAATGTGGTCAAAAAACGA
GATCACAGCGTATGGGCTCAAAGGGATTCTTACGGTGTTATTAACAGACA
TATGGGACCTGGTTATCAGTCAGGTAGTCTACCCACTGGTGATGATGGTG
ACGAGAAACGAACAACAGTGGTCTATCAAATGAGTCGAAATATCCCGTCC
GAAtcttatttgaaaaagaaactacGCAAACATTTGGACACTCTGAACGC
TCaagatttgaatattaaacAGTTTAAAACATGGAGATACTTTCCACACT
ATCAACCAAAGGATATTGAGGATGGTATTTTGTGGAAGATATTGGAGATT
CAAGGACGTTTTAACATGTGGTATATTGGCTCGTCTGTATCATTTGAAAG
CGTCAAATCTGTAGTAGAATATAATAGCTTGATTGTTGAAAATATGGAGC
CTGTAGCAAGataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:1382575..1386410 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 742-1557:3021 |
| Aaloc | 538-738:1217 |
| Aaloc | 1-537:1 |
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