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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000142_pilon:13366..14438- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006879 ID=XLOC_006879|Name=XLOC_006879|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1073bp|location=Sequence derived from alignment at sc0000142_pilon:13366..14438- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTGGGGAGGATGATCACAACGACCTTGATAATGAACCAATAAATGC
AGAAGATTTATTTGGAGATGATTTAGGACTGGATGGGAATGAAAATGAAC
CGGCTGCAGATACCGGGGATCCTGATGGCGCACCTGCTGCAGGAAGTGAA
GACCCTTCAACAGGAGCTGCAAAACCAGCAACAAAAAAGCGTGTAATCAA
TAGGTTACCAAATTTGAATGATCAATGGCTGATTGATTCAAAACGTGAAA
ACATACGCCGAGTTAATGGTTATTTTGAAAAAATAAAATTCAAAAAAGGA
AAAGGTCAAGAGCGTGAAAATTTAAAAATGATTTTACAACGTTATGAGTA
TTTTGGTCAAAATTGTTATCCTAAGTTATGTTTTAAAGATTTTGTTGAAA
AAGTTGAATTTGTGAGTGGAAAGTCCAGAATCAAGCATGTTCTACAAGAT
ATACGACTTGACCGGAATATGAATCCAGGGGGCTCAGATGATGATGATGA
TAATGGAGAGGAGCAAGCAATGAACATTGAAGATCCTGTTCCAAATACAA
TGCCAATGAATGATGACCACCAGTCAACAACATCTCCAGCACGAGAGTCA
AGTCCTCCAAACTCTCCTCCCCCTCCACCTCCTAAACCAATGACAGATGA
AATGAGAGAAATGATACGCAAAAAGAGGGAAGAAGCTTTAGCAAAACGTA
AACAAAAAATGGATGAATCGATGAATAAATCGATCACTAATGAAAATGAT
GAGGAAAGTACTGACAATGAACAACTTATTGAACAAAGCCAAACAAATGA
AAACAGCAAAAGTGAAAATAGAAAAAATGAAGTCGACGCAAACTCCACTC
TGAAAGAAAATGAAGAAAACCTAGTAAATGAGGAGAAAAACCTTGAATCC
AATGGATCTAGTGAGACAAAGGAGCAAGAAAACAAAAAAAATGAAAATGA
GAATGAAACTGACTTTGAAATTGATTTAGAAAAAGCTTCAACACAAGAAA
GTGTAATTACAAAAACAATGAACAAGAAGAGATGAACAAAATCGCTGAAG
AAAGTAAAATGGATATTGATTGA Coding sequence (CDS) from alignment at sc0000142_pilon:13366..14438- >XLOC_006879 ID=XLOC_006879|Name=XLOC_006879|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2146bp|location=Sequence derived from alignment at sc0000142_pilon:13366..14438- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTGGGGAGGATGATCACAACGACCTTGATAATGAACCAATAAATGC
AGAAGATTTATTTGGAGATGATTTAGGACTGGATGGGAATGAAAATGAAC
CGGCTGCAGATACCGGGGATCCTGATGGCGCACCTGCTGCAGGAAGTGAA
GACCCTTCAACAGGAGCTGCAAAACCAGCAACAAAAAAGCGTGTAATCAA
TAGGTTACCAAATTTGAATGATCAATGGCTGATTGATTCAAAACGTGAAA
ACATACGCCGAGTTAATGGTTATTTTGAAAAAATAAAATTCAAAAAAGGA
AAAGGTCAAGAGCGTGAAAATTTAAAAATGATTTTACAACGTTATGAGTA
TTTTGGTCAAAATTGTTATCCTAAGTTATGTTTTAAAGATTTTGTTGAAA
AAGTTGAATTTGTGAGTGGAAAGTCCAGAATCAAGCATGTTCTACAAGAT
ATACGACTTGACCGGAATATGAATCCAGGGGGCTCAGATGATGATGATGA
TAATGGAGAGGAGCAAGCAATGAACATTGAAGATCCTGTTCCAAATACAA
TGCCAATGAATGATGACCACCAGTCAACAACATCTCCAGCACGAGAGTCA
AGTCCTCCAAACTCTCCTCCCCCTCCACCTCCTAAACCAATGACAGATGA
AATGAGAGAAATGATACGCAAAAAGAGGGAAGAAGCTTTAGCAAAACGTA
AACAAAAAATGGATGAATCGATGAATAAATCGATCACTAATGAAAATGAT
GAGGAAAGTACTGACAATGAACAACTTATTGAACAAAGCCAAACAAATGA
AAACAGCAAAAGTGAAAATAGAAAAAATGAAGTCGACGCAAACTCCACTC
TGAAAGAAAATGAAGAAAACCTAGTAAATGAGGAGAAAAACCTTGAATCC
AATGGATCTAGTGAGACAAAGGAGCAAGAAAACAAAAAAAATGAAAATGA
GAATGAAACTGACTTTGAAATTGATTTAGAAAAAGCTTCAACACAAGAAA
GTGTAATTACAAAAACAATGAACAAGAAGAGATGAACAAAATCGCTGAAG
AAAGTAAAATGGATATTGATTGAATGCTTGGGGAGGATGATCACAACGAC
CTTGATAATGAACCAATAAATGCAGAAGATTTATTTGGAGATGATTTAGG
ACTGGATGGGAATGAAAATGAACCGGCTGCAGATACCGGGGATCCTGATG
GCGCACCTGCTGCAGGAAGTGAAGACCCTTCAACAGGAGCTGCAAAACCA
GCAACAAAAAAGCGTGTAATCAATAGGTTACCAAATTTGAATGATCAATG
GCTGATTGATTCAAAACGTGAAAACATACGCCGAGTTAATGGTTATTTTG
AAAAAATAAAATTCAAAAAAGGAAAAGGTCAAGAGCGTGAAAATTTAAAA
ATGATTTTACAACGTTATGAGTATTTTGGTCAAAATTGTTATCCTAAGTT
ATGTTTTAAAGATTTTGTTGAAAAAGTTGAATTTGTGAGTGGAAAGTCCA
GAATCAAGCATGTTCTACAAGATATACGACTTGACCGGAATATGAATCCA
GGGGGCTCAGATGATGATGATGATAATGGAGAGGAGCAAGCAATGAACAT
TGAAGATCCTGTTCCAAATACAATGCCAATGAATGATGACCACCAGTCAA
CAACATCTCCAGCACGAGAGTCAAGTCCTCCAAACTCTCCTCCCCCTCCA
CCTCCTAAACCAATGACAGATGAAATGAGAGAAATGATACGCAAAAAGAG
GGAAGAAGCTTTAGCAAAACGTAAACAAAAAATGGATGAATCGATGAATA
AATCGATCACTAATGAAAATGATGAGGAAAGTACTGACAATGAACAACTT
ATTGAACAAAGCCAAACAAATGAAAACAGCAAAAGTGAAAATAGAAAAAA
TGAAGTCGACGCAAACTCCACTCTGAAAGAAAATGAAGAAAACCTAGTAA
ATGAGGAGAAAAACCTTGAATCCAATGGATCTAGTGAGACAAAGGAGCAA
GAAAACAAAAAAAATGAAAATGAGAATGAAACTGACTTTGAAATTGATTT
AGAAAAAGCTTCAACACAAGAAAGTGTAATTACAAAAACAATGAACAAGA
AGAGATGAACAAAATCGCTGAAGAAAGTAAAATGGATATTGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000142_pilon | genome | sc0000142_pilon:13366..14438 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1012-1074:64 |
| Aaloc | 1-1008:1074 |
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