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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000142_pilon:23918..31061- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006861 ID=XLOC_006861|Name=XLOC_006861|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7144bp|location=Sequence derived from alignment at sc0000142_pilon:23918..31061- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTCGAAAGAAAATCCAAATCTCTCGAATCAACGATGAAAGGAACCG
TCAGGTATAATAAAACCTTTTAAATTTTTTGTTGTAATTTTTTCTTCTCC
CTCTCCTGATGACCTCCTACCCATCAAAGTGAAATGTATTTATTTATTTT
TGCAATCAAAATAGTGAAATTCTATTTGAAGGGCCACAGTGAGACTAAAA
GTGGCCTTGACTAGAGGATGTGTTATTGCTTTTGTAAACATTTAGAAATA
TTTTAAATGTTGAACTCTGAAAAGTCAATGAGTAAATGATTTTCAAGGTC
AATATTGAAAATATAGATTAAACAAAAATTTGTGTCTTTCATATTCAAAG
GAGGATGCTTTTTACTGACCATATCCCTGAAATCACTTATTTGTTTTACC
AATTATCAATTTTTGACAGAGGATATTTTACACCAAAATTTTTGTGGTCA
TATATTTATATGTCTGTAACAAGATACTTCTTATGCTACTCAATGAAAAA
GGGTGACTCAAGCCTATTCATTTTCTCCTATGATTGGTTACAACTTGTAA
TAAATGGGTTTTAATATATAATTATTAGGCCACAGGATAAGAGATCTAGA
ATTTTTTGCTTCTATTCACAAACATCAATAAGATTTGATTATTTGAATCA
CTGTTTCATGTAAAGTTATAGCATCTCAATCAGTATTGTTTTTTTCTCAA
AATTCATGAATAAAACAATGTATCGTATTCATAAGTGAAAATAATCAATT
TCAGCATGAAATCTGATCAAGAAACTATCTGATACAAAAGTTCACTGTGT
TATATTGCCTTTGATTGCCTTCAACTGCTTTCAATATAAAAATTGCGCAA
AAAAAGTTGTAAGAGAATTTTTTACAGGAAGTTGTTAACATTAATTTCTT
CTTGAAAAAGAAATAGCATTCCTTTTACTTCCCTTGTCAACATCCTTCCC
TTAAAAGTTACATCATTGATCATTTTCATTTTGGTGTTGCTCATTTTTCT
TACAAAAGGGAAATTCAAGGCTTTACATATTATGAACTGTATCATTTCAT
TAAGTATCATCATATTTCAAAATCATTGACCTCGATATTGATACTGAAAA
TTTTTATACATAATGTTTTAAACCCATGCAGTGATAATGCACCGTTGTTG
TGTCTACTACCTATTGCAATTTGTCTACCGTCCTTTTTCTGCAGTCACCA
TTGTTGAGTGATAAATCTCATCTATTAATTCATAAGATTCAATGTCACGT
AGATCTGTTTTATAGTGATTAAAAAGGGCTGATAATGGGGATGAATTCAT
TTTAGTTTTATGAGAGAAATCTACATTAATTACAAATTTTAATGATAAAT
TTTAGCAGAATGCATTGTCATTTGGCATAAATTGATTGAGCGAAAAAGAA
ATCAATTGATTTACAACTTGTTTTTGTCATTTATTTGTAAAAGGATGTCA
TTTAGGAGAAAGCTTTTTTTAATTCCCTATAATTGCCCTCAATTATTGCT
AGGATGCAAAAGTCAAAAGGTTCAAACTGTCATATACTTGACTTGTATAA
TCAGTGACGTTATTCTGTCAAAACAAAAAAAACATTTTTTCAAAACTCTT
AAAAAACTTAAAGTTTAACATTTTTATACTTTCCTTAGATATTTTTCTGT
CTCTACTTCTAAAAGAACATTTTAACAAAAAAGTAGAATGGAGTAATTAC
ACAATCATTTCAAATTAATTGAAACATAATTACACTTTAATGTTGTACCA
TTAGTGGATAATTTCATCCCTTTCATATTTATATTAAACATCTAATTATT
GTTTCATATTTTATAAATATTGTTCTTCTTCATTAACCCTATTATGCAAT
CTTTTACCACACAGAGAATTATTTCAGAGACACAAAGAAATTATGAAATT
CCATATGAAAATTACAAGAATGGAAAGTTGAAATTATGTTTTGGCTTGCC
TCACTGATAACTTGTGCCAAAAGCCTGATACGTCCCAATATTGTCTACAT
TCTCTCTACTTTTATGACACATGTTTCTTAATAAGAACAAACTATATCAG
AACATAGGGCTCAAGATATTAAGAACAAGTTAAGAAAATGTTTTGGCTTT
AAGGAATTTCTTAGTAAATGCATAAGAATACTCATAAAATGGTGAAAATA
AAAAACATTTTACAGTAAGAACATTTTTAGGCTTATGACTCAAAAAATTA
TAATATAATATAAAAGTAAAATCAAACGCAATTACTTTTACTTTCTCCTT
AATTGATATTAGTAGGGATGGAGGTTATGTTTAATTTCTGCTAGGAACTG
AAAGTTACAAATTTTTAAATCTATTCAACTTGATTTTGCCAAACCTTCAA
TTTTCTCCTTAAATTCTGTCAAACAGCATAGTGCGGAAAGGGGTCTGACC
CCCCTTCTTAAATGATCCCCCCTTCTCGGCATCCCCCCAACCTTTAAAAA
TGCCTATCCCCCAAGGGTTTCGGGCTAAATTTTTTATGGTAAAAAGGGAA
GGGAAACAGTAAAGAAAAATTAAGTCTGGCAAATATAATACCACTTTTTA
GTGAAAATAAAGAACTTCCTTTCATGCAGACCAAATTTCATAACAGTGCT
GGAAAATAATCTACAATATATGTAAGCCCCCCTTAAACGATCCCCCCCTC
CTTGCTATCCCCCCCCCCCCTTTTTAGTGAAAATTTCTGACCCCCCCCCC
CTTCTTCACTTTTTTGGAAGGTGTCATCCCCCCGGGTTCGAACTATGAAC
AGTCTAAACAAGCACAACAATACCACGGTAAGTGTAAACCACAGGTTGCA
GGTTTCAGGTCACAGGTTACAGGTTACAGGTCACAGGTCAGTGTTGGTCA
GCTTTAATTACTGTAAAACACAAAAAAAATGTTTGAAAAACAGTTGTTAA
TGTCAAAAATATAATTCCAAAGGTATTTTATTGATCTAGAACTATTTTAA
AGCTAAATATCTACCCACGTGCTGACCATGTGATTTCGCGTTTTATTCCG
TGTATAACACGGACCTGTAATAGTTGTATTATATATTACATCTATATCAC
ACATGTAAAAAAAATAACTTTTCAATGTTATACGCATGTTACGTATGTTA
TATACAAAGAATAAAGAAATATTCGAATATCGATCTCAACCTTTGCTTAA
CATAACATAACAGGAAAATAGCTATTTCACAATCACTATGTCATATCTCA
TTTTATCTCCTGCATCACCTTGGGTATGATAACAAGAATTGATGAAAATA
GCGTCAATGGGATTATATTTTATAAATGTTTCAATATTTTTATCCCCTGC
TTTGTATTTTTGATAAAATGACCACACCTTTTTCATCTCTCTAAAACAGC
TCTCTTGGAGTATTTATTGTTTTCAAAACCTGTCAATCTATATCCACTTG
CAGCGTCAGCATCCTATTATGCATGAAGAATATTTTATTGTTAATTGGCG
TACAAAAGCTCATACTTTCAGATAACATAATTATTTACATAATTTAAGTG
TCATTTGTTGTCAATATTTGGGGATGATGATTTGTCGTTTAAGTCTTCTA
AATAACATTATTAACATATTTTGATATTAGATTTCCATTAGTTATAATAT
TTTCAGGAACTTATGTTATGAGTTGTATGTTATGAATTGTATGTTACGAG
TGCGTTACAGTTTTCCGGTCTGTGTTTTGTTAACCTGTAACCTGTGACCT
GTAACCTGTAACCTGTGACCTGTAACCTGCAACCTGTAACCTGCGGTTTA
CACTTACCGACAATACCAGCACCAAAAATCCCTTTGAAATTCCCAATTTC
CATCAACAATTCAGGAATAGAATATTTTTCCAAATTCTGAAACTCCGATA
ATATTTTGTTTTTCTGGACTGAAATAGACCTATTTTCTGTCTTAGACATA
GGACCTAATTTCCGAAATTACGTCCAAATATTCATAAAATTTTGCCACTC
CGCCCCAAAAATTGCATGATTCTGCTCCTCGGACAACCATGAAACTATTC
AAAACCGTATATGTATAACAGTTGCGAAGCCCTCAAAAGTACCCTACTAA
TGTTAACAAATGATGACTAATGTAAAAATGTCTCTAAAACGCAATGGATC
AAAACGCGTATCCAAACACTTTCATACAAATGCTTAAAAAAGTTGGTATT
GTGAAGTATGATTATGAAAGATCTACATAATGTTAGAAATAAGGTTTTTC
TAAGTTTATCATTTCTTCAATTTCAGGTCACCTTCACTAAAAGGAAATTT
GGTCTGATGAAGAAGGCTTATGAACTAAGCATCCTGTGTGATTGTGAAAT
TGCCTTGATTATCTTCAACTCCAGTAACAAGTTATTCCAATATGCAAGCA
CAGACATGGATAAGATTTTGCTGAAATATACAGAATACAATGAACCACAC
GAAAGTAGAACAAATGCAGATATTCACGAGGTATCTTACTCTCTTCATAA
TTATAAAGTTTGTCAGCAGCTTTCTACAACACTAGCTTAGATACTGCCTT
TGACTGAACCAAACCTAAAGTAGCCCAACAACATCAATGATAGCAGGGAC
CTAGATCTAGCTGGAGCCTTAATTCATTCTTAAAATACAAGAGGAGATTG
GATGAGAGTGTCCTGAAACCAAATGCCTAAAAAATGATAGATGGTGTGAC
ATCAGCTGAATCAGAGGGCTGTGAAGTAAGTAAGTTCGCAGTCAAGGGCA
ATCTGAAGGCTCCCTTTTTTCTAGCTGTCTTCCCTGAGGGGCACCATTCC
TTTCCCTGGATTTCTGCACTTGCCCTTGATCAATTGCTGAGCATCAAGCA
GAAAGGCATCAAGTACCATTTTGGGAATATTTGTTATGACCAGACAGGGG
GTTGAACCTACAACCTTGTGCATCATAGCTGGATGCTCTACCTCTATACT
ACTGCTAGAGAGCTGAGGAGAACTGTTTATGCTTTAAATTAAAATGATGT
TGAACCTTTGTATTTAGAATTAGCACTTTCAAATTCTCTCTATTTTTGTA
GACAATTTCAAGAAAAGAAAACAAGAATTGTGGATCTCCAGATGATGACT
CTGTAAGGGAAATTTATCTTGACCCACCCCTGCTTCTCCACACAATTCAC
ATAGATCTGTAAATAAAAGCAGTGGAACTATCATGTCATGGGAACTATTT
TCTATTTCTCAATTTCTTAGTGTGATTGCAACAAACAAAGAAATTTTTTA
TTGACCTATCATTTATCAATAATTATCTTTGATTGTTTGCTCCCCTCTCT
GGCTTTTTCTTTCTTCTTCCCTATTGAGATACCATATGCTTCCTTTTGGA
TTGTCATGGTTTCTCAAATTTGAAGAAAGACCCTCCTTCTTTTTATATTG
CAAACTGATACCTGCAACTTATAATAAATAATGTCTATACTAATGCAAAA
AAAATTACTTAATTTGAAAGCTTTCTTTAATATTGATTTTGTGCTGCTCT
TTCTCTCTCCCTCTCTTCATAAGGCCATGTTAGACGCAACATTTTCTGCC
AACATTTTAGAAAATTTTCTTAAGATAGGTAAAATTTTACCATATGTGAG
CTTTTAAAAATTTTATTTTTTTTTCTCACACTTTACCTTTTAGTTTGTCC
TTACTCCAAGAACTGAAATGAAATACCAAAAGATTAACGAAGAATTTGAA
ATTATGATGAAAAAGTCCTCAAATGGGGTAAGAAGTTTTTTATGAATTAC
CCAAAGTAAAGTAGAAGTAAGATTTCAGTTTGAAACTGATATCGAGAATT
TTCAGCACATCTCAGATTTGATTAGCCATTAAACACACCGAAAAACTTTC
TCCAATTTCTTCAGACTTGACAACTTTTAAAAACTCAAGCTTTGTACCTT
ATTTGACTAGGAAAAATCTTTTGTGTAAAAAGAGGACATAGAAGGTAGAA
ATGATGATTCTTATATCCAGGAAAATACCTGAAGACCTGGAAATGTGTTC
GGTCACAAATTGAGATTATACTAGCCAAATAAATAGTAGGTCTACTTAAG
TTATTAACACGCTTTACAACACGTCTATTGTTGTCTATTTTCTTAGGTAA
CTTCAAGTTACCCACAGATGGGATCCTTACCACACAATATGCCCTCTCCC
CATGACGATACTGGAAAAGATATGAGATCAACAACTCCTTTACAAAGAGA
TGGTAGATTGTCTGCTAGCCCACACCCTCATGCACGTAAGTTGATGGTTT
TACGTTAAAATAAACAAAATGAATAAAAACCACGTTGACCCAGCCAAAAA
TATACTGGTTTTTAAGCAAGTTGTTTATTTGTTCTTTAAAAGACATACTT
CCCAGTTACAAGTTTCATATAAATTTTTTTAGCGCTTCATCATGGATTAA
CATCACCGCCACCACAAAACTTATCTTTACCAAGTCGCAGTCCACACCCA
ATGAACCCACCACCTCTAGGAAACACGAATAACAATATCAGTCGAAGTGG
AACACCAAACATGAAACAAGGAGGAATGCAAAATTCACGAGCTCAACAAA
ATCACACACCGAATCAACAACTGATGCATGGAAACATGGGAAACTCTGAG
TCAATGCCAAACAATATGCCTAGTCAGACCTTTGGAGGTGGAGGAGGAGG
TGGCTCAATGCAACCGCCAAGCTTGCCATCAAATTTCCCAACGAGTTATT
CAAGTTATGATGTAGATACTGGTCAAATGTCTTATGGAGTTACCTCAATG
AACAACAGCATACATTCTAGTCAAGCAATATCCCACAATCCAACACTGCA
AAGGTATTTGCTTTCTTTATAGTTTAAAACAATTTTTGCTACGAATTTAA
TCATTTGGAACCAATACCTGTGTCCCATCCCATGCAAGTAAATATTGCAT
TTAGTACTCGCACGGTCAGTTTTAACATTCTCTTTTTCTAACATTTTTAC
CTTCAGGTCACACAGTTTGAACAACAACAAACCAAACATGAACATCAAAG
TTGAGCCACCAGACCACATGAGGGGGCCGTCCCCTTCTATTCACAACTTT
CAATCTCCTAATCCATTTCATCATACTGCGCCACCATCGCACCATAAAGA
CTTTAGTGACCAGAATAATATGATGTCACTTGGTGGTGGTGGGCCTATGT
CTAAGAGACAGCGTATAGAAGGCCATAATGATGGATGGCAGTAG Coding sequence (CDS) from alignment at sc0000142_pilon:23918..31061- >XLOC_006861 ID=XLOC_006861|Name=XLOC_006861|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2382bp|location=Sequence derived from alignment at sc0000142_pilon:23918..31061- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTCGAAAGAAAATCCAAATCTCTCGAATCAACGATGAAAGGAACCG
TCAGATGGGTCGAAAGAAAATCCAAATCTCTCGAATCAACGATGAAAGGA
ACCGTCAGGTCACCTTCACTAAAAGGAAATTTGGTCTGATGAAGAAGGCT
TATGAACTAAGCATCCTGTGTGATTGTGAAATTGCCTTGATTATCTTCAA
CTCCAGTAACAAGTTATTCCAATATGCAAGCACAGACATGGATAAGATTT
TGCTGAAATATACAGAATACAATGAACCACACGAAAGTAGAACAAATGCA
GATATTCACGAGGTCACCTTCACTAAAAGGAAATTTGGTCTGATGAAGAA
GGCTTATGAACTAAGCATCCTGTGTGATTGTGAAATTGCCTTGATTATCT
TCAACTCCAGTAACAAGTTATTCCAATATGCAAGCACAGACATGGATAAG
ATTTTGCTGAAATATACAGAATACAATGAACCACACGAAAGTAGAACAAA
TGCAGATATTCACGAGACAATTTCAAGAAAAGAAAACAAGAATTGTGGAT
CTCCAGATGATGACTCTACAATTTCAAGAAAAGAAAACAAGAATTGTGGA
TCTCCAGATGATGACTCTTTTGTCCTTACTCCAAGAACTGAAATGAAATA
CCAAAAGATTAACGAAGAATTTGAAATTATGATGAAAAAGTCCTCAAATG
GGTTTGTCCTTACTCCAAGAACTGAAATGAAATACCAAAAGATTAACGAA
GAATTTGAAATTATGATGAAAAAGTCCTCAAATGGGGTAACTTCAAGTTA
CCCACAGATGGGATCCTTACCACACAATATGCCCTCTCCCCATGACGATA
CTGGAAAAGATATGAGATCAACAACTCCTTTACAAAGAGATGGTAGATTG
TCTGCTAGCCCACACCCTCATGCACGTAACTTCAAGTTACCCACAGATGG
GATCCTTACCACACAATATGCCCTCTCCCCATGACGATACTGGAAAAGAT
ATGAGATCAACAACTCCTTTACAAAGAGATGGTAGATTGTCTGCTAGCCC
ACACCCTCATGCACCGCTTCATCATGGATTAACATCACCGCCACCACAAA
ACTTATCTTTACCAAGTCGCAGTCCACACCCAATGAACCCACCACCTCTA
GGAAACACGAATAACAATATCAGTCGAAGTGGAACACCAAACATGAAACA
AGGAGGAATGCAAAATTCACGAGCTCAACAAAATCACACACCGAATCAAC
AACTGATGCATGGAAACATGGGAAACTCTGAGTCAATGCCAAACAATATG
CCTAGTCAGACCTTTGGAGGTGGAGGAGGAGGTGGCTCAATGCAACCGCC
AAGCTTGCCATCAAATTTCCCAACGAGTTATTCAAGTTATGATGTAGATA
CTGGTCAAATGTCTTATGGAGTTACCTCAATGAACAACAGCATACATTCT
AGTCAAGCAATATCCCACAATCCAACACTGCAAAGCGCTTCATCATGGAT
TAACATCACCGCCACCACAAAACTTATCTTTACCAAGTCGCAGTCCACAC
CCAATGAACCCACCACCTCTAGGAAACACGAATAACAATATCAGTCGAAG
TGGAACACCAAACATGAAACAAGGAGGAATGCAAAATTCACGAGCTCAAC
AAAATCACACACCGAATCAACAACTGATGCATGGAAACATGGGAAACTCT
GAGTCAATGCCAAACAATATGCCTAGTCAGACCTTTGGAGGTGGAGGAGG
AGGTGGCTCAATGCAACCGCCAAGCTTGCCATCAAATTTCCCAACGAGTT
ATTCAAGTTATGATGTAGATACTGGTCAAATGTCTTATGGAGTTACCTCA
ATGAACAACAGCATACATTCTAGTCAAGCAATATCCCACAATCCAACACT
GCAAAGGTCACACAGTTTGAACAACAACAAACCAAACATGAACATCAAAG
TTGAGCCACCAGACCACATGAGGGGGCCGTCCCCTTCTATTCACAACTTT
CAATCTCCTAATCCATTTCATCATACTGCGCCACCATCGCACCATAAAGA
CTTTAGTGACCAGAATAATATGATGTCACTTGGTGGTGGTGGGCCTATGT
CTAAGAGACAGCGTATAGAAGGCCATAATGATGGATGGCAGTAGGTCACA
CAGTTTGAACAACAACAAACCAAACATGAACATCAAAGTTGAGCCACCAG
ACCACATGAGGGGGCCGTCCCCTTCTATTCACAACTTTCAATCTCCTAAT
CCATTTCATCATACTGCGCCACCATCGCACCATAAAGACTTTAGTGACCA
GAATAATATGATGTCACTTGGTGGTGGTGGGCCTATGTCTAAGAGACAGC
GTATAGAAGGCCATAATGATGGATGGCAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000142_pilon | genome | sc0000142_pilon:23918..31061 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 955-1191:238 |
| Aaloc | 535-951:811 |
| Aaloc | 394-531:1099 |
| Aaloc | 310-393:1552 |
| Aaloc | 259-309:2144 |
| Aaloc | 55-258:2919 |
| Aaloc | 1-54:7145 |
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