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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000285_pilon:22764..24990- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006560 ID=XLOC_006560|Name=XLOC_006560|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2227bp|location=Sequence derived from alignment at sc0000285_pilon:22764..24990- (Clytia hemisphaerica_ch_hm2_pilon)
GTAGCAGAAATGATAAAGTCACAAAAATACAAAGAATGGCAAACAAACCG
GGAAATCTTTCGTTGGATAACAACTGCAGCTATTTTTCTGTACGGTCTCG
AAAGTCAAGGATTTTTGGTGACAGTTTTGTTTTACCTCATGGAGAGATAT
GATCTATCGAAAGATGACGTCAGCTTTTATCTCAGTTTAACACAATTTTT
GAGTTGTTCTGTAGAAATGGTCAGTGGTTTAGGCCTTGGCAGATATGCAG
ATCAAACAAGAAATTTGAGAAAAGTTGTTTTGCTAAATTTGGCAGCAACT
TTTGTGTTGAACCTGATTTACACTCTTCCCGTTCCACTCTGGGTAATTAT
CATTGCACGAACACTAACAGGTGTTTCGGAGTCATTACAAACTGCTGTTG
TCGGTAAGATGTCTGTAGCTAACTCTTTGGAGGGATAGACTTAGACAAAA
TTGGATATGAGGACGTGTCGCACATCAGGGTCCCCTTTTTAGGCTCTGAA
GATATCTGTGATATCTAGTGTTCTAAATATACTAATTTTCAAGATGTGTA
CTTCGACTTTTTGACTATTTTCTTTCTCACAGGGTCTAAAATTGTCTAAA
CTCCATCGGCACACCCCCCCCCCCGTTGGTCGTCAAAGTCAGTGCCCCCT
GGGCTCGCAATAGGGAACTTTAGCATCTAGGAGGGTAGATTTGAAAAAGT
ACGGCAGAATTGAACAAAAAGAAAGCCCTTAGGGATTTATATCTGGATCG
TGGCTAGATTCTTTTCTTTTCCTATAAATTTTCTCATGATAAATAGTTTT
GATAGGGTCCTTCAAAATTCTTTTTTGATGTCTCCTTTGGAACAAAGACG
GTAAAGGAAAAGAACAATAGTTTTAAATGATATTAATCCCTCGAGAATTA
TAAGGGCATTTTTTACAAAAACTTGACTGCATTTCAAATTTATCCATGCG
ATAATAAATCTAGATAATCTCGGAGAAAATTTGCCATGTGATCATAAGCT
TTACTTCACGTCCTCATTCAAGTCGCCGTCTTTAGATGCTAAAGGTCCCT
AATTACTCACATACCGTTACGTAGTCTAATATACTTTTTCTACTCTCATC
CTTCCCCTCCCCTTCCCTCAGGCTTAAGAAGTTTTTCATCGGACAGATCT
TTTGAAAACTGCAGATATAAGAAGAAACTATTTTTTATCGAAGACCATCA
TTAAATTTCATTTTTTTTATCAATAGGTGAATTTCGGCGCATTTACATCG
ATGATAAAAGCAAATTGGTTTCTGTGCTAAGCTGGTATGAAATCGCCTTG
CAAACTGGAAGAAATTTTGGTGCTATTCTATTACTCATTTTATCAAGTGT
TTCCTTCAAAGTTGGCAATTGGAAAATAGATAAGTTAAATATTCTAAATT
TTTTGTTGTCGATTTCTGGACTGTTACTGCTCATTATATCTTTATTCAAA
ATAAAAGATGTATCCAAGGACTTTGACCGTTTAAAATTAACAAATGATGA
TGTGAATCACACTGTAGTATCAGGTGAACAAACCCAGGGTAAATCAGATT
TAAATGAAATTAACAAAACTTCAACACCAGCAGTAAATGACGATCAACCA
TCTTTAATGAAATGGCACGAGGTTTTTACTTTCGATATTATAACTATCAT
ATTATCAATCAGTTTGATTCGCTACGAGAACGTTGTTTTCATTAGTAATA
CCGTCATCTTAACAGCGACAAAGTATGGATGGAAAAGTAACTATCTATTC
GCGTTATTTTTCGTATGCAACTCATTCGTCATCATAATAACATCCGCCCT
AACTAAAACTGGTTTCTTCAAAGGGCGTTTCCGCCCATTTTTCATGCAAA
CTATAGCCATAACCACTGCCGTCCTTATATTGATTTCAATTAATCTAACC
AAGGTAGACATTTTACGGACGTTCGGACAACAAGTTGTATTTTTCTCTAT
CTTAAAACTTACCAAAGCGTTCACCCTTTTCGTTGGTAACACATGTGGTC
TTCTGCTACTCTTTCGCCTGGTCAAACCGCAAGATAGCAGCTTCGTTGCA
GGCTACAAGTCATTTATTATGGTGATGTTTAAAGCGTATGGATTCTTGAC
AGCCTATAAAGCAGCATTTTATCCTGAATATTTTCAAACTCCGTTCGTGG
TAGTGATGCTCGTTTTGGTGCACATTATGCTTCGGAGAAGAGAGATTCAT
CTTTATCGTACCAAAACAACAAACTAA Coding sequence (CDS) from alignment at sc0000285_pilon:22764..24990- >XLOC_006560 ID=XLOC_006560|Name=XLOC_006560|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2808bp|location=Sequence derived from alignment at sc0000285_pilon:22764..24990- (Clytia hemisphaerica_ch_hm2_pilon)
GTAGCAGAAATGATAAAGTCACAAAAATACAAAGAATGGCAAACAAACCG
GGAAATCTTTCGTTGGATAACAACTGCAGCTATTTTTCTGTACGGTCTCG
AAAGTCAAGGATTTTTGGTGACAGTTTTGTTTTACCTCATGGAGAGATAT
GATCTATCGAAAGATGACGTCAGCTTTTATCTCAGTTTAACACAATTTTT
GAGTTGTTCTGTAGAAATGGTCAGTGGTTTAGGCCTTGGCAGATATGCAG
ATCAAACAAGAAATTTGAGAAAAGTTGTTTTGCTAAATTTGGCAGCAACT
TTTGTGTTGAACCTGATTTACACTCTTCCCGTTCCACTCTGGGTAATTAT
CATTGCACGAACACTAACAGGTGTTTCGGAGTCATTACAAACTGCTGTTG
TCGGTAGCAGAAATGATAAAGTCACAAAAATACAAAGAATGGCAAACAAA
CCGGGAAATCTTTCGTTGGATAACAACTGCAGCTATTTTTCTGTACGGTC
TCGAAAGTCAAGGATTTTTGGTGACAGTTTTGTTTTACCTCATGGAGAGA
TATGATCTATCGAAAGATGACGTCAGCTTTTATCTCAGTTTAACACAATT
TTTGAGTTGTTCTGTAGAAATGGTCAGTGGTTTAGGCCTTGGCAGATATG
CAGATCAAACAAGAAATTTGAGAAAAGTTGTTTTGCTAAATTTGGCAGCA
ACTTTTGTGTTGAACCTGATTTACACTCTTCCCGTTCCACTCTGGGTAAT
TATCATTGCACGAACACTAACAGGTGTTTCGGAGTCATTACAAACTGCTG
TTGTCGGTGAATTTCGGCGCATTTACATCGATGATAAAAGCAAATTGGTT
TCTGTGCTAAGCTGGTATGAAATCGCCTTGCAAACTGGAAGAAATTTTGG
TGCTATTCTATTACTCATTTTATCAAGTGTTTCCTTCAAAGTTGGCAATT
GGAAAATAGATAAGTTAAATATTCTAAATTTTTTGTTGTCGATTTCTGGA
CTGTTACTGCTCATTATATCTTTATTCAAAATAAAAGATGTATCCAAGGA
CTTTGACCGTTTAAAATTAACAAATGATGATGTGAATCACACTGTAGTAT
CAGGTGAACAAACCCAGGGTAAATCAGATTTAAATGAAATTAACAAAACT
TCAACACCAGCAGTAAATGACGATCAACCATCTTTAATGAAATGGCACGA
GGTTTTTACTTTCGATATTATAACTATCATATTATCAATCAGTTTGATTC
GCTACGAGAACGTTGTTTTCATTAGTAATACCGTCATCTTAACAGCGACA
AAGTATGGATGGAAAAGTAACTATCTATTCGCGTTATTTTTCGTATGCAA
CTCATTCGTCATCATAATAACATCCGCCCTAACTAAAACTGGTTTCTTCA
AAGGGCGTTTCCGCCCATTTTTCATGCAAACTATAGCCATAACCACTGCC
GTCCTTATATTGATTTCAATTAATCTAACCAAGGTAGACATTTTACGGAC
GTTCGGACAACAAGTTGTATTTTTCTCTATCTTAAAACTTACCAAAGCGT
TCACCCTTTTCGTTGGTAACACATGTGGTCTTCTGCTACTCTTTCGCCTG
GTCAAACCGCAAGATAGCAGCTTCGTTGCAGGCTACAAGTCATTTATTAT
GGTGATGTTTAAAGCGTATGGATTCTTGACAGCCTATAAAGCAGCATTTT
ATCCTGAATATTTTCAAACTCCGTTCGTGGTAGTGATGCTCGTTTTGGTG
CACATTATGCTTCGGAGAAGAGAGATTCATCTTTATCGTACCAAAACAAC
AAACTAAGTGAATTTCGGCGCATTTACATCGATGATAAAAGCAAATTGGT
TTCTGTGCTAAGCTGGTATGAAATCGCCTTGCAAACTGGAAGAAATTTTG
GTGCTATTCTATTACTCATTTTATCAAGTGTTTCCTTCAAAGTTGGCAAT
TGGAAAATAGATAAGTTAAATATTCTAAATTTTTTGTTGTCGATTTCTGG
ACTGTTACTGCTCATTATATCTTTATTCAAAATAAAAGATGTATCCAAGG
ACTTTGACCGTTTAAAATTAACAAATGATGATGTGAATCACACTGTAGTA
TCAGGTGAACAAACCCAGGGTAAATCAGATTTAAATGAAATTAACAAAAC
TTCAACACCAGCAGTAAATGACGATCAACCATCTTTAATGAAATGGCACG
AGGTTTTTACTTTCGATATTATAACTATCATATTATCAATCAGTTTGATT
CGCTACGAGAACGTTGTTTTCATTAGTAATACCGTCATCTTAACAGCGAC
AAAGTATGGATGGAAAAGTAACTATCTATTCGCGTTATTTTTCGTATGCA
ACTCATTCGTCATCATAATAACATCCGCCCTAACTAAAACTGGTTTCTTC
AAAGGGCGTTTCCGCCCATTTTTCATGCAAACTATAGCCATAACCACTGC
CGTCCTTATATTGATTTCAATTAATCTAACCAAGGTAGACATTTTACGGA
CGTTCGGACAACAAGTTGTATTTTTCTCTATCTTAAAACTTACCAAAGCG
TTCACCCTTTTCGTTGGTAACACATGTGGTCTTCTGCTACTCTTTCGCCT
GGTCAAACCGCAAGATAGCAGCTTCGTTGCAGGCTACAAGTCATTTATTA
TGGTGATGTTTAAAGCGTATGGATTCTTGACAGCCTATAAAGCAGCATTT
TATCCTGAATATTTTCAAACTCCGTTCGTGGTAGTGATGCTCGTTTTGGT
GCACATTATGCTTCGGAGAAGAGAGATTCATCTTTATCGTACCAAAACAA
CAAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000285_pilon | genome | sc0000285_pilon:22764..24990 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 406-1404:1000 |
| Aaloc | 1-402:2228 |
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