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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000322_pilon:119395..121708- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006422 ID=XLOC_006422|Name=XLOC_006422|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2314bp|location=Sequence derived from alignment at sc0000322_pilon:119395..121708- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACAGCTGTAACATTCAAGGAGCTGAGTGCAAAAAATACAGATGT
TTTGAATTATGAGCTACTTCCGAAAATCAATAACTTTTTATTGGAGACAC
TTCCAGAAAGTTTAAAGTGTTTTAGCTGTCAAAATATTCTTCAAAGACCT
CAACAACTATCCTGTGGACATAGGTAAGTCCATAATTTATATCCTTACAC
CATGAGCCTGCTAGGATTCCCTTGCTAGAAAAATCGACAAGCAGGCTAGC
TCTAAAGTTCTAAACCAGCATTTTATAAATTATGAAAACCAGATTATGAT
TCTTCAATGGGGATCAAAACTATAAAGTGCACAAATTACAACTTTACAAT
AGTGCCACGGATCATCAGTGGATAGTATTCAATTATCATTATCCCTTTAT
TTTCATTTGTAGACCTTTTGCAAAAAAAAGGAAGAATAGAAATGTTTTAT
TTTTTACTGCTCTATTCACATACTGAATTTGAAAGATGTTCTATGTGGCC
TTTTTTTGCAAACTTTAAAAAATTATTTTTTTTCCGCTTTTGCAGGACTT
TAGCTTAAGTGCTTGCGTGTAGCATAGGGTACAAAGTCCAAATATATTGT
GTTTCCCGTAATTTTTGTATGAAGAGTTAGGTCTATACTGACACGCTGAG
AACAATACCCTGACGTATCATCTCCTTTGAAAAACTTCACTGGACTGGTA
TCTAGGAAAGACATTATTGTTTTGAACTGGTATCTGAGAAAGACACTCAA
GTTTTGAAGATACTGGAAACTCTAAGTCCATTCCATTTGTTATCCAGCTC
CTTTAAAATTTAATTCCAACTTCTCAAATGCTAGATCATTGATATAGGGG
AAGTTAACGGCGTTGTTTGACAATTGTAAGGATAAGATTTTGCTAAAACA
CTTTAACATTATGTGTTTATTGGCAAAGACTTCGAATTTTACTGACAATC
ATTCTAAATTGAAAAGCCTTTTCATTCAATTAAAAACAGTATTCAAAATT
GACTCAAAAAGCCTATACACCTAGATGAAGGGGAATTGAATTTTTAGCAA
AAAGAGATCCCTCCTGATTAATGGATTTGTACAGGAAACTTAATTTCTTT
GCTTTATCTTTAGGGTATGTTTACACTGTGTTGAAGATGTTGTCAATCGA
GGCAATCGATTCTGTCCTGAAGACGGGTATGAAATTGAGAAGGAAACATT
CCCAGATAGATCTGCAATGAAAGATATAATGCTTCTTAGTTGTTATTGTT
TACGAAAAAATGACGGGTGTGACTGGTTTGGTGTCATTATGGATCTTGAA
CAACACCATACAAAAGATTGCCCCTATGGAGATGTTTTTGTTTGTAAGTT
TCAACAGATTGGTTGTAGAGGTAAAGGTCAGAATATAGCTTTGGAAAAGC
ATTACCAGCACGATTTTGTTTATCACCATACACTTTTGGCTGCTGGTATG
GCTGCAACATTGAATATAACCAAACAACCTGAAAATCTTTTAACTGAGGA
ACAGATTGATAGTAAACTTGAAGAATTGGGGAGAACAGATCAAGAACTGA
TGTTAAAAGAACATGAAATTAAGAAAAGTGAATTATCACAGTTAAAGCTG
AATACATTTGTAAATGAACTATATGGTAAGATTGAGAAGGTGTTGACACA
AAAATCACATTATGAAATTGTTCTTGATCAACATTTAGAGAAAGCTCAAA
AACTCAAAGGTTTGGATTCTAGAACAGCTGATGCAAAAATAGCCACATTA
CAGAGTACAGTGGACCGCATACAAAGTACTTATAAAAGCCAAAAGATTGA
TTGGCAGAAAATGGATATGCAGTCTAAGATATGCTTATCAACAACAAATG
GTGAAGGTTATCTGTGGAAAATGGATCAGTTTAAACAACGCGTTTTGGAA
ACAATCGAATATGAAAATTCTCCCAAGGGAGATCTGTTTACACCACCATT
GTATACTGAATTATATGGTCACCGGTTCTGTATCAAAGTCAATTTAGGAG
GTGGTATTGAGGGATCACATATATCTTTATATATGGTTATCATGCAGTCA
AAGTTAGATGAGATTCTAGACTGGCCTTTCCCTTATATTGTGAAACTAAC
ATTAATAAATCCAAACAGTAAGAAAAATATTGAGCATTTATTGGTGCCGA
CTCCAGAGTTACCACACTTCCAACAGCCGTTACGTGAACAGAATATGTCG
ATTGGATTTCCACGTTTTGTGAGTCATGAGACATTGCATGCTGATAATTT
CATCATTGATGATGCCATATTTATACATATACAGACTGAGCGTGTACCGT
TTGAAAGTAACTAA Coding sequence (CDS) from alignment at sc0000322_pilon:119395..121708- >XLOC_006422 ID=XLOC_006422|Name=XLOC_006422|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2748bp|location=Sequence derived from alignment at sc0000322_pilon:119395..121708- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAACAGCTGTAACATTCAAGGAGCTGAGTGCAAAAAATACAGATGT
TTTGAATTATGAGCTACTTCCGAAAATCAATAACTTTTTATTGGAGACAC
TTCCAGAAAGTTTAAAGTGTTTTAGCTGTCAAAATATTCTTCAAAGACCT
CAACAACTATCCTGTGGACATAGATGGCAACAGCTGTAACATTCAAGGAG
CTGAGTGCAAAAAATACAGATGTTTTGAATTATGAGCTACTTCCGAAAAT
CAATAACTTTTTATTGGAGACACTTCCAGAAAGTTTAAAGTGTTTTAGCT
GTCAAAATATTCTTCAAAGACCTCAACAACTATCCTGTGGACATAGGGTA
TGTTTACACTGTGTTGAAGATGTTGTCAATCGAGGCAATCGATTCTGTCC
TGAAGACGGGTATGAAATTGAGAAGGAAACATTCCCAGATAGATCTGCAA
TGAAAGATATAATGCTTCTTAGTTGTTATTGTTTACGAAAAAATGACGGG
TGTGACTGGTTTGGTGTCATTATGGATCTTGAACAACACCATACAAAAGA
TTGCCCCTATGGAGATGTTTTTGTTTGTAAGTTTCAACAGATTGGTTGTA
GAGGTAAAGGTCAGAATATAGCTTTGGAAAAGCATTACCAGCACGATTTT
GTTTATCACCATACACTTTTGGCTGCTGGTATGGCTGCAACATTGAATAT
AACCAAACAACCTGAAAATCTTTTAACTGAGGAACAGATTGATAGTAAAC
TTGAAGAATTGGGGAGAACAGATCAAGAACTGATGTTAAAAGAACATGAA
ATTAAGAAAAGTGAATTATCACAGTTAAAGCTGAATACATTTGTAAATGA
ACTATATGGTAAGATTGAGAAGGTGTTGACACAAAAATCACATTATGAAA
TTGTTCTTGATCAACATTTAGAGAAAGCTCAAAAACTCAAAGGTTTGGAT
TCTAGAACAGCTGATGCAAAAATAGCCACATTACAGAGTACAGTGGACCG
CATACAAAGTACTTATAAAAGCCAAAAGATTGATTGGCAGAAAATGGATA
TGCAGTCTAAGATATGCTTATCAACAACAAATGGTGAAGGTTATCTGTGG
AAAATGGATCAGTTTAAACAACGCGTTTTGGAAACAATCGAATATGAAAA
TTCTCCCAAGGGAGATCTGTTTACACCACCATTGTATACTGAATTATATG
GTCACCGGTTCTGTATCAAAGTCAATTTAGGAGGTGGTATTGAGGGATCA
CATATATCTTTATATATGGTTATCATGCAGTCAAAGTTAGATGAGATTCT
AGACTGGCCTTTCCCTTATATTGTGAAACTAACATTAATAAATCCAAACA
GTAAGAAAAATATTGAGCATTTATTGGTGCCGACTCCAGAGTTACCACAC
TTCCAACAGCCGTTACGTGAACAGAATATGTCGATTGGATTTCCACGTTT
TGTGAGTCATGAGACATTGCATGCTGATAATTTCATCATTGATGATGCCA
TATTTATACATATACAGACTGAGCGTGTACCGTTTGAAAGTAACTAAGGT
ATGTTTACACTGTGTTGAAGATGTTGTCAATCGAGGCAATCGATTCTGTC
CTGAAGACGGGTATGAAATTGAGAAGGAAACATTCCCAGATAGATCTGCA
ATGAAAGATATAATGCTTCTTAGTTGTTATTGTTTACGAAAAAATGACGG
GTGTGACTGGTTTGGTGTCATTATGGATCTTGAACAACACCATACAAAAG
ATTGCCCCTATGGAGATGTTTTTGTTTGTAAGTTTCAACAGATTGGTTGT
AGAGGTAAAGGTCAGAATATAGCTTTGGAAAAGCATTACCAGCACGATTT
TGTTTATCACCATACACTTTTGGCTGCTGGTATGGCTGCAACATTGAATA
TAACCAAACAACCTGAAAATCTTTTAACTGAGGAACAGATTGATAGTAAA
CTTGAAGAATTGGGGAGAACAGATCAAGAACTGATGTTAAAAGAACATGA
AATTAAGAAAAGTGAATTATCACAGTTAAAGCTGAATACATTTGTAAATG
AACTATATGGTAAGATTGAGAAGGTGTTGACACAAAAATCACATTATGAA
ATTGTTCTTGATCAACATTTAGAGAAAGCTCAAAAACTCAAAGGTTTGGA
TTCTAGAACAGCTGATGCAAAAATAGCCACATTACAGAGTACAGTGGACC
GCATACAAAGTACTTATAAAAGCCAAAAGATTGATTGGCAGAAAATGGAT
ATGCAGTCTAAGATATGCTTATCAACAACAAATGGTGAAGGTTATCTGTG
GAAAATGGATCAGTTTAAACAACGCGTTTTGGAAACAATCGAATATGAAA
ATTCTCCCAAGGGAGATCTGTTTACACCACCATTGTATACTGAATTATAT
GGTCACCGGTTCTGTATCAAAGTCAATTTAGGAGGTGGTATTGAGGGATC
ACATATATCTTTATATATGGTTATCATGCAGTCAAAGTTAGATGAGATTC
TAGACTGGCCTTTCCCTTATATTGTGAAACTAACATTAATAAATCCAAAC
AGTAAGAAAAATATTGAGCATTTATTGGTGCCGACTCCAGAGTTACCACA
CTTCCAACAGCCGTTACGTGAACAGAATATGTCGATTGGATTTCCACGTT
TTGTGAGTCATGAGACATTGCATGCTGATAATTTCATCATTGATGATGCC
ATATTTATACATATACAGACTGAGCGTGTACCGTTTGAAAGTAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000322_pilon | genome | sc0000322_pilon:119395..121708 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 175-1374:1201 |
| Aaloc | 1-171:2315 |
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