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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000292_pilon:37421..40374+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006290 ID=XLOC_006290|Name=XLOC_006290|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2954bp|location=Sequence derived from alignment at sc0000292_pilon:37421..40374+ (Clytia hemisphaerica_ch_hm2_pilon)
CCATTACAAGAAATGGCGTCCATACAATTCACAGACCTCCGTCAACAACA
ATTCGAATGCGTTCTTAACATCTTACAAGAACGTGCCACTCAACTGGGAA
CAACTTGGCCGGTCATGCTCAGGATCATTGGTAGTGCTACTAATCAACAA
AAGTAAGAGAATTTCGTCTAAGTGTAAATACAGTTAATTTCTCTTAATCG
ATTTCCGAGgggaattagatttttttagaaTGAGAGCATCGAATGGTAGA
TCGTTGTTTATTAGGCTTTCTGGTTGacacggtgactttcaatattatcg
aataatggagattattgaatagtagaatgtcgaattagagactGTTGACC
TTTATAAATACGCGAGTGGTTGAGGCTTTTAAAATCACAATGACCAGACA
ACACCAAAAGTTTGAATTctaccaaaaggaaatattcttttgtttcagtA
AACCCTTTGTAGAGGTATTTATATTAAGGATTAAAAGACTCCCTACCAGT
GAAAGAAATACTTCATGGACCTTGTTAACCAGTTTCACGCTTTCCGGTAT
AAtgacattaccgagtttatgtatgtgtgtttttctgcgacggaggtggt
aaggttctaatttgtctacatcaaatcagcacttttaccgtcctcgattt
tgcgggtcaaaactgcgggttattctgAATCGTTTCAGTCACTTTAGCGT
ccccaaaagtgcaaatacataaactcgctattgttcATCGTACAACATTG
CAGCCAAATGGGAAGTCATTCTACGTTCTAATTTCACGATAAATAAGGAG
GCTTGTTATCTTCCAGTTCAGAAATAGCCTATGATTCCTctctaataaaa
aatattttgtatttcagTGACGTCATCACGCGGTTAGCATTCCAAAGTTT
ACAATTGGTTGTTACTGACTACTTACCCATAATTCCGTGCTGGTGTTTGC
AAGTCCTCGTAGAGGTGGTCGGCAAGTTTGGCTTGCAACCAAATGAAATC
AATATCAGTCTGACCGCTATCGGGCTCTTGGTAAGTGTCAATAATGTTAA
GAGAGGTCGTTTTTGGTAACAATGTTTTTAATCAGTTGAGAATGGAACAG
TTTCACCCGGCTTTAGTTGTGAAAAgtgatgaaaaatatgaaacttTTTG
CATGACGTGGTTAGCTGTAAGGCATGAATCTTGAAGGCATGAAACCTGAA
ATAGTTCAATTAAGATTTAGGGAAAGTTAATACtaataatagccgcattc
tttttcaccgttcaaaaCCTCGTTGAAAAACCTTGCCTCTTTGCGTCAAT
ATTTATGCCAAATCTATTGTTTTTCGCTCCAACTGCTAAGCTTCACTTTT
CAAAATGTAATATCCTTCATTATCTTTGACAGTGGAATTTATCAGACTTT
TTGTATCAAAACCGATCGAACCTGAAACGCGATTTGGAAGAGTACAAAAA
ATGTCAACCAGATCTTGTGAAGAAGGAAGAAACCGCTCCACAAAGTCCTA
TTCATAATATAGAACTCTACCCTAGCTTGGATTCATTGGTCCCGCCGTTC
GATtcagcctggatgtgcttatatGGCAAGCTAGGTGAACTATGTGTGGA
TCCAAGGCCAGCAGTGCGGAAGAGCGCCGGACAGACTTTATTCTCGACTA
TTTCGGCTCACGGTGGTTTGTTAGAGAATCAAACTTGGTATATGGTTTTA
TGGAAGGTACGTTTACGTTTACGTTTGGCCCCACCCCTTTACCCTATTTT
agtcaaaaaaacatttgagtTTTCGAACAAAAGCTAATTATTGGGAAGTA
GCTGTGCGAAGCTGTgttttgtatgactttttccACTTGAATGAACCATT
CTGATTTTGTAATAATGTTAGAACAGAGTTTCTCAACGAGTGTGTATTCT
GTTTTCCTTTCAAAACCCCTTCCAAATGAATAATAGTTCGAACTTTCCTC
TTTTTCAGGTTTTATTCCCTCTGTTAGAGAAAGTTCGGTCTACTTCTTCA
GTGGCGGCAAATTGTCCACCGCCCTCCGATAACACCGTCCTCCCTGGCAA
TATTCTCATCCATCACTCAAGAGATACTGCTGAGAAGCAATGGGCGGAAA
CCTGTGTGCTCACCCTTGCGGGTGTGGCAAGGGTGTTCTCCACCCGATCT
CACATCTTGAAGAAGTTGGATGAATATCCCAGAGCGTGGGCGCTCTTACT
AGAAATCATCGAGTCGAACGCTTTAAGTAAAAACTCTGAAGTTGCATTAA
ACTCTTTGAAAAGCTTTCAAGAAATCGTGGATGACTTGAGTGCGAATAAT
AAAGCACCCAAATCCAAAGATTCAACTTCGGACGCAAGCGCTGTATCATT
CGTTGCAGACATCACAGATACGGAGTTGGACCTTTGGGCAAATGCTTGGC
GAATCTGGCAAAACATCGGTACAAACTCCATGGAAAATGAACACTTTTTG
TGCACTACAAAAGACGCTAACGGCAAGACGGAAACACGGACCATCTATCC
TTCACAACCGTATCTGACGGCACTCATAAATATCTTTCCACCTTTGTATT
CGCGCATCTTCACGCGTTTCGGGATAGGTGATTTACAAAGGTTTTGTAAG
ATACTAACGAGGTCCATTTCAATGCCATTACATTCCGACACTTCACCATA
TTTGTTACCCACCTTCCATCACGAGACTGTTCTCTCGCCTTTGCAGCAGT
CCGTTCTCAACTCTATCAAAGCCCTACAACAACCTATACCGATGCTGTCA
GGTTGTAATATCTTGGACCATAATTCTCAGCAACCTATGTACCCTACTTT
ATTCTCAATGCTACTCTCTTTCGTTGAATTCGCCTGCTGTCCGCCCAAGG
TTGCGTCAACGCCCAAGGAAACTGAAAGTTACGCCCCACGAGGACGGGCG
GGCGAATGGGTGGTGATGAACTATGTGCCATTAGCTGAACACGCAATGAA
AATG Coding sequence (CDS) from alignment at sc0000292_pilon:37421..40374+ >XLOC_006290 ID=XLOC_006290|Name=XLOC_006290|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3270bp|location=Sequence derived from alignment at sc0000292_pilon:37421..40374+ (Clytia hemisphaerica_ch_hm2_pilon)
CCATTACAAGAAATGGCGTCCATACAATTCACAGACCTCCGTCAACAACA
ATTCGAATGCGTTCTTAACATCTTACAAGAACGTGCCACTCAACTGGGAA
CAACTTGGCCGGTCATGCTCAGGATCATTGGTAGTGCTACTAATCAACAA
AACCATTACAAGAAATGGCGTCCATACAATTCACAGACCTCCGTCAACAA
CAATTCGAATGCGTTCTTAACATCTTACAAGAACGTGCCACTCAACTGGG
AACAACTTGGCCGGTCATGCTCAGGATCATTGGTAGTGCTACTAATCAAC
AAAATGACGTCATCACGCGGTTAGCATTCCAAAGTTTACAATTGGTTGTT
ACTGACTACTTACCCATAATTCCGTGCTGGTGTTTGCAAGTCCTCGTAGA
GGTGGTCGGCAAGTTTGGCTTGCAACCAAATGAAATCAATATCAGTCTGA
CCGCTATCGGGCTCTTGTGACGTCATCACGCGGTTAGCATTCCAAAGTTT
ACAATTGGTTGTTACTGACTACTTACCCATAATTCCGTGCTGGTGTTTGC
AAGTCCTCGTAGAGGTGGTCGGCAAGTTTGGCTTGCAACCAAATGAAATC
AATATCAGTCTGACCGCTATCGGGCTCTTGTGGAATTTATCAGACTTTTT
GTATCAAAACCGATCGAACCTGAAACGCGATTTGGAAGAGTACAAAAAAT
GTCAACCAGATCTTGTGAAGAAGGAAGAAACCGCTCCACAAAGTCCTATT
CATAATATAGAACTCTACCCTAGCTTGGATTCATTGGTCCCGCCGTTCGA
TtcagcctggatgtgcttatatGGCAAGCTAGGTGAACTATGTGTGGATC
CAAGGCCAGCAGTGCGGAAGAGCGCCGGACAGACTTTATTCTCGACTATT
TCGGCTCACGGTGGTTTGTTAGAGAATCAAACTTGGTATATGGTTTTATG
GAAGTGGAATTTATCAGACTTTTTGTATCAAAACCGATCGAACCTGAAAC
GCGATTTGGAAGAGTACAAAAAATGTCAACCAGATCTTGTGAAGAAGGAA
GAAACCGCTCCACAAAGTCCTATTCATAATATAGAACTCTACCCTAGCTT
GGATTCATTGGTCCCGCCGTTCGATtcagcctggatgtgcttatatGGCA
AGCTAGGTGAACTATGTGTGGATCCAAGGCCAGCAGTGCGGAAGAGCGCC
GGACAGACTTTATTCTCGACTATTTCGGCTCACGGTGGTTTGTTAGAGAA
TCAAACTTGGTATATGGTTTTATGGAAGGTTTTATTCCCTCTGTTAGAGA
AAGTTCGGTCTACTTCTTCAGTGGCGGCAAATTGTCCACCGCCCTCCGAT
AACACCGTCCTCCCTGGCAATATTCTCATCCATCACTCAAGAGATACTGC
TGAGAAGCAATGGGCGGAAACCTGTGTGCTCACCCTTGCGGGTGTGGCAA
GGGTGTTCTCCACCCGATCTCACATCTTGAAGAAGTTGGATGAATATCCC
AGAGCGTGGGCGCTCTTACTAGAAATCATCGAGTCGAACGCTTTAAGTAA
AAACTCTGAAGTTGCATTAAACTCTTTGAAAAGCTTTCAAGAAATCGTGG
ATGACTTGAGTGCGAATAATAAAGCACCCAAATCCAAAGATTCAACTTCG
GACGCAAGCGCTGTATCATTCGTTGCAGACATCACAGATACGGAGTTGGA
CCTTTGGGCAAATGCTTGGCGAATCTGGCAAAACATCGGTACAAACTCCA
TGGAAAATGAACACTTTTTGTGCACTACAAAAGACGCTAACGGCAAGACG
GAAACACGGACCATCTATCCTTCACAACCGTATCTGACGGCACTCATAAA
TATCTTTCCACCTTTGTATTCGCGCATCTTCACGCGTTTCGGGATAGGTG
ATTTACAAAGGTTTTGTAAGATACTAACGAGGTCCATTTCAATGCCATTA
CATTCCGACACTTCACCATATTTGTTACCCACCTTCCATCACGAGACTGT
TCTCTCGCCTTTGCAGCAGTCCGTTCTCAACTCTATCAAAGCCCTACAAC
AACCTATACCGATGCTGTCAGGTTGTAATATCTTGGACCATAATTCTCAG
CAACCTATGTACCCTACTTTATTCTCAATGCTACTCTCTTTCGTTGAATT
CGCCTGCTGTCCGCCCAAGGTTGCGTCAACGCCCAAGGAAACTGAAAGTT
ACGCCCCACGAGGACGGGCGGGCGAATGGGTGGTGATGAACTATGTGCCA
TTAGCTGAACACGCAATGAAAATGGTTTTATTCCCTCTGTTAGAGAAAGT
TCGGTCTACTTCTTCAGTGGCGGCAAATTGTCCACCGCCCTCCGATAACA
CCGTCCTCCCTGGCAATATTCTCATCCATCACTCAAGAGATACTGCTGAG
AAGCAATGGGCGGAAACCTGTGTGCTCACCCTTGCGGGTGTGGCAAGGGT
GTTCTCCACCCGATCTCACATCTTGAAGAAGTTGGATGAATATCCCAGAG
CGTGGGCGCTCTTACTAGAAATCATCGAGTCGAACGCTTTAAGTAAAAAC
TCTGAAGTTGCATTAAACTCTTTGAAAAGCTTTCAAGAAATCGTGGATGA
CTTGAGTGCGAATAATAAAGCACCCAAATCCAAAGATTCAACTTCGGACG
CAAGCGCTGTATCATTCGTTGCAGACATCACAGATACGGAGTTGGACCTT
TGGGCAAATGCTTGGCGAATCTGGCAAAACATCGGTACAAACTCCATGGA
AAATGAACACTTTTTGTGCACTACAAAAGACGCTAACGGCAAGACGGAAA
CACGGACCATCTATCCTTCACAACCGTATCTGACGGCACTCATAAATATC
TTTCCACCTTTGTATTCGCGCATCTTCACGCGTTTCGGGATAGGTGATTT
ACAAAGGTTTTGTAAGATACTAACGAGGTCCATTTCAATGCCATTACATT
CCGACACTTCACCATATTTGTTACCCACCTTCCATCACGAGACTGTTCTC
TCGCCTTTGCAGCAGTCCGTTCTCAACTCTATCAAAGCCCTACAACAACC
TATACCGATGCTGTCAGGTTGTAATATCTTGGACCATAATTCTCAGCAAC
CTATGTACCCTACTTTATTCTCAATGCTACTCTCTTTCGTTGAATTCGCC
TGCTGTCCGCCCAAGGTTGCGTCAACGCCCAAGGAAACTGAAAGTTACGC
CCCACGAGGACGGGCGGGCGAATGGGTGGTGATGAACTATGTGCCATTAG
CTGAACACGCAATGAAAATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000292_pilon | genome | sc0000292_pilon:37421..40374 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 640-1635:1959 |
| Aaloc | 316-639:1383 |
| Aaloc | 154-315:869 |
| Aaloc | 1-150:1 |
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