|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000292_pilon:117626..123949- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006278 ID=XLOC_006278|Name=XLOC_006278|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6324bp|location=Sequence derived from alignment at sc0000292_pilon:117626..123949- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACATCGAACAACTAGACAAGTCAATGAGCTATCAATCCTTAGAATC
CGCGCGGCGATTGGCGGACGAAATGAAGCAACAAGCGTCCGATTATGCAA
AGGAGGCAGGACATGGTAGAGGTTTGTGTCCGGAAGAACTATCTTGTTGT
ATCGGCTGTTTGTTTCTTTTTATTCTTTGTCTCGGAAAGCTACGAAGGCA
ATTTCTACCACTATTTGGATATTTTTATTAATTTTGAATGTTACAAATAT
TAAATGGAGTGCCGTCTTAATTTTTGATCGGTCCTTCAATGAAGTTGATT
GTCTTCTTCAACCTTCTTTACAGTCACCAATAATAGCCTTCACGAGGAAA
ACGAAACTCTACAAATGAAGATTGCAAGACTGGAAAATGAATGTAAACTG
TAAGTCGGGTTTAATTTGTATTATTATCCATATAGCGGTCATTAAGTAAG
CCATTAAAGATTCGAACGGCGGGTGGTATTGAAAGGTTCTATGACTCAAA
TAGTCATACCAGCGCTGAGAAAACTAAGGCGTCGTGCTTCAGAGGGCTGA
AATATCATTAACCGCCCTGGTTATAGAGCGATAACGTCATTTGCGGCCCG
CTCGGAACTTTATTGAAGTCGTTGCATTGAAGCGGTGAGACTAAACCGAC
GTCAGAAAAAAACACTTTTTTGTCATTTGAGGCCCGCTCGCAAGGGTACT
CAAAACTTGTTGAAGTCATTGCATTGAAGCGAAAAGACTTGGCTGACGCT
AGAAAAAAACGTTGTTTGAATTTTTGATACGGATAATAATAGTAATAGCG
TTAAGTTTTCGTTCGTTGTTGTCATTAATTCTGCCCTTGAAGTTTGATTA
TTAGCCCTCTAGTGCCATTTGCACCCTCCGCTTCGCGAAAATAACAACAA
CGACCTCAAACTGAACGCCATTGTTATATTAATTGGCAGCATATGGTTGA
TGAAATATTTTGGCGTTTTTCATTACCCGACCGAGCGAATTCATATCAAG
TAAAATTGAAAAAAAAATGGTTCAAACACCGAAAAGTTCCGGGAAAATGA
ATTCAATCATGAAATTTTAAGTTTTGTTTTAAACCTATGTTTTTATCTTT
CTCGAATCTCTCTCTTCATAGATTGAGGCAAGAAAATCAATTACTGTCAA
AAGCTCAACCTTCCTCAAGGCCATCATGCGTAAGTCTTTTCACATACTTA
CAGATTTGCTTCTACTTTTGAAATATTTTTGGAATACTTTTGGAATAAAA
TTTTTACTTTTAAGTTACAATTGAGAGCGTTCTCTAATCCGACGTTCTCT
TATTCTACGCGTTGCATTATTCGATGGTATTGAAAGCCATCGTGAACGAG
AAACTCTCTAATTCGATAGTAATTCGATACGCTCCATTGGGCTATTCCAG
AAAAAAATGAATATATGGGGGGGTGGAGGAATTGAAATCGACTGTTTTTT
CGTTTTTTTGTGATTCGTTCTTTCAAATAGCACTTCTTCACGCATTTTCC
TCTTTTGCAGTCTCCTTCACCGCAACGTCACAGATTCGAATCCAATACAA
GTACAGTGAGTGTAAACAATTTTTTGGTTTATAACTTCTTATCAAAGCAT
GAGCATATCTTAAGTCCGTTTGCTTTAAGTGTGCACTATTTTGCTTGCCA
TCTTCAATCAATTTTAATTCTAACATATTATATACCGAATATCAAAGCGA
ATTTATGGTACTTGAAGAAGTTGTTATTTTTACATTATGTAAGGGAAGAA
ATTTTCGCGGAATTTAAGTTCGCGGTTGAGGGAACTTTTTGTTTACAATT
CCAAAAAGACCAATTTTAGGGTGATTTTTTAAATCCTGAGAATAATCGTG
TTTCGTGGAATTTAATTTCGCGGATTCGTCAAAGAACTGCGAAATTAAAT
TCTGCGAAAATTTCTTCCCTTAAGGTATGCAAAATCTTGATGTAGTCGTT
TATTGAAAGCCGTGTATTTAAAAAGATCTCGAGCAAGCTTCGAAATTCTT
ACACACTGTTTGTGCTGAGAGGGGTTAAAAGGAACTTCAAGAAGGAGAAA
GCTTCATGAAAAATTACAACTACCATACTGTTGCCATTTTCAACACGACA
AGTCAGTTTACCAATATGTTTCTTTTTCAAATGAATTCACTTTTCTTTAC
AGCATGGAGATGATGAAAACACGACATCTACCAGCAATAGTATTACTGTA
AGTCTCTTCATTGACATCGCTGGTTTTCATTTCTATATACAATTTTCGTA
GACATTGTACATGTTATTCTTCTCACGCATACACACCTCGACATATCTTC
GATTCTTTTGCACGTCTTAAGCCCGGTCTCCACTTGCGCGCGCTGCGATC
AAACTCTATCTAGCAAAGCTCCCACGCTATTGGTCAAAAGAAAAATGAAG
CAATTCCATTGGCGCGATCTGACGTAACGGTTGAAAAAAGTTAAAACGTA
TTCAACTTTTTTTTCGAGCGCTCGCTACATTTTCATGATGTAATCTTGTT
TCCAGGCAAAAAGGATTGAAGCCAAACGGTGTGGTCGCAGCGCGCGTTAG
TGGAGACCGGCCTTTACTCTTGATTTATACCTACCATAAAGTGGCAATTT
ACTCAATTGTTTTAAATATCCAAAAATTTGAGATAGAAATTATGTTTTAG
AATTGTGGTTCTTATTGATTTCAGCGTGCTTTATACCTGTAGTGTTTCTC
TTGTCTTGAGGCCTTCATTCTAGGATAGCTTGGATGCTTGTTAACCTTTC
TCTTGCAATTCAACATCTCATTGGGTTCCCAGCTAGAAGTAACCACAATT
TTAAAATATAATTGCTAAACTCTTGAATGACTGCTAATAATTTGGTAGTC
TTTTTAAAACTGTTTTTATTATATTTATGTGATATTATTAAATGTTTGAA
ATAAAGCTATAAGTTAATAATTCACGCACTAAACGATAAACAGATTAAAT
AAATTTTTAATATTAAAGTAGTGAACGTAACTTATAATAACATGGTCGGA
TTGCTTGAATGAATGAATGAAAGAACGAATGAATGAATAAATGAATGAAT
GAATGAGTGGTTGGTTGGTTGCATGAATCGCTAAAATACGATTAAAATGT
CGCGGATAGTATAAGATTAAACGATAAAGCGCTTCATAATCATTCCATCG
AAAAGCATCTTGGCTATCTTAATATGTTGGCAAGAGAAACACTACCAGGT
AACCTCGCTAAGATTTTTGTTCAAATCTTTTCATTGCTTTTTATTTATGT
CGTGTACAGGGTGTCCCGTAAAATGTTCTGTGTCAGAACACGACTACAAA
TAAAAAAATAATCAACTACACAAATGTTTCCAACTTGTAGTCAAATTTTA
TACAACACTCTTTTTCAGGACACCCTGTAAAATTCTTGTGCTATATTTTC
AGAATTTTTTGTCATTTAGGGTCGGCGCAAAATCTGAGAATTTGAAAAAT
TAGTTGTATTTTATTTTTTCTACCGTAGATCGATGAGAATTGTTCTGTAA
AATACAACGATTGGATGGACTGGTTGATTATTGAAGCATTCTGATCCAAG
TCGAAATGAATTCTGCCAGCATCATAGTGGCTTCGATCGAAATTGAAAAT
GCATCTTTGAAGACGAGCTAACAATCTGAAATTTCAAATCTTATCACTCC
AACGATGTTAATTGGTCTTGAAAAATATATTTCTTCAAATGCGTTCGATT
AAACTGTGTGGATGGTTTGTATTTAATGTGAAAGCCTACTTTGCTTGATT
AATTGTAGCTTATGTTTCGTGTTATTTGGTTTTTGGTGTTGCGTATTATC
TAACTGTTATTATACAAAATGTGGTATTTTTTTATTGAATTTCAATTAAT
TTAATTTTTAGAGAGTACACACTTTATTTTTTTAATGAATTCATTTTTCT
TAATTATTAGTGGAGATTTTCCTACAAAATCGAAAAATATTTTTATACAT
AAATCATATCATATTCATACTCTCATATACGTTCAAACTTTTATCTTGCA
CTGTTGTTTCTTTCTAGCGGAAAAAACCTTCTATCTCATTCAATGTGTCA
CTCTCTCTTGACGTCAATGCAATGACTTCTTTCGTTCTTAAATAAGTATT
TATCTTTGATAATCCAGCCGGACTAGAATATTTCAAAAGTATATAAAAAA
CATAACCCAAAAATAATCATCTCCTTGGATTTCAAATAAGAATAATAAGG
GAATACGTTCGGTGTTACAGGATTATTTCGATGTGTCTTATGCTATCGTA
TCATTTCAAACCAATTTCATTTTCAATTGGTTATGGGTTGTGTTGAGTTA
TGTTTTTATTTTATACTTTTCTGCCAACTTTCTGTCCACATTTTTCTTAC
TCTTGAAATTATAATTTACAGGACATTCATGTAGAAATAACCATAATTGC
AACAAGGGTGCTTTACACACGTTCATTTTGTTGGTCGACCCCTGCAATTT
TTAAAAAGCTGTTAATGTTTTGGCAGTTTTTGGCTAGCTATTATATTTGA
AAGATTTTGTTTCAGCCAAAATAATGGATGGGTGTTAAGCATCTTACAGA
CACGTCATCAAATTTATTCCGATTTTGACGTCAAATATTTTTTTCATTAC
ATTATTGCACTTCTTTTTTTCTCGTTTTCACTATACGCAACCTTTTTGCT
AATCCACTTATCTGCAACACGCAGCTCTTCTTTACCCGTAACCTCATATT
TACTGCTTACTGGCGAGATGTGTTTCAGAAATCCTAGTGTTAGTTTTGTA
ACTTTTTCTACTTTTATCAATTTTACTAAAAACATTATACACAATAAGGA
GAAAATATAAATAATATTTGTTAGTTTCCTTTACCTTTTGATCAATCCAA
TCCAAACCAATCCTTTAGAATCCTTCGCTCAGTGAAGTATACAGTGAAAT
AACAGAATCACTCAAAAAATTGAGCGAAATATCGAGAAATAAAGAACTAA
CTTACAATTGGTACACTGTGTTTCGTGCTGTTGCAATCTTCAGCCAATGC
AGTGTATTGCAGATTTTATTCAAATACCTTAAGGGAAGAAATTTTCGCCG
GACAAATGTTCGCGGAATTTAATTTCGCGGTTTTTTGACAGATCCGTGAA
ATTAAATTTCGCCAAACACGAATATTCTCAGGATTTAGAAAATCACTTCT
AAAATAGGTCTTTTTAGGGCAAAAGAGATCATTTTTGAAACAAAAAATTC
TAACCGCGAAAGTTTCTTTTTCCGAGAAATTCTTCCCTTAGGGTAAAATA
ATTGTAAGTTAGTTCTTTATTTCTCGATACTTGAAGTATGACAGCCCATT
TCGCATATTGAAATTATTTTTCTTTCTTCTATCTAGCCTGAAGAACTTCA
AGAACAATTGAAGCTAGCAGAGGAGTCGTTAGAGAAATTGACCACTGAGC
GAACAGATACGATCGAACGTTTCACGCAGAGACAACAGCAATTGGTACGT
ACTTTCGTTTTGTGAATACAGTGGAGTTTCTGCGACTCGAGCACGCACGG
GGAACGCAAATTTGTTCGAGTAATGGAGTAAGATTTATAAGGCATTGTTA
ACTTAAGGGACCGGAAAACTGGCCAATGATGTCACTTTCAATGGCAACAG
GTGGTCACACCGGGTCACACTTCACAAACTTTGATCTTCTATCTACAAGG
AGCAATAATCAAACATAAAATCCCTTGACACTTCTGCACATTGGAGTCCT
TTTGGGGACAAAAAGTAGCTACATTTGTCACCATATCTAAGAATCTCGAA
TGAAAATGAAATGAAAACCTAAGACCCGATGATGGGAGAAGAATCTCTTG
ATCCGTAATCTCGTAATCCAAGCCACGATAAACTTCCAATATGAAGTCTA
AGAATGACTAAACTGAAAACGAAACAAGAGTCAAGGTATAGGTGGAAAAT
TCAGAATATTAAAATTCAGTCAGCATTTCAAAATTGTTACAATCGGTTTG
CCTAAATGGGTTCTTCAAGAAAATATCGGTTCATGGGGAGTAGAGGATAA
ATTGATTTTCAATGTTCTACTCCTGGATATTTCGCTATATCTCCCGGGTG
CGTGTTTCGACCATGAAAAAAACATTAAATCGACACCATGGACATGGCAG
TTTTTCACAACTTTTTCAATACCAATGGACTCTAGTGTTACCGCAAAACG
TTCATTGAATTTCTTCTTTCATTTCTTTTGCAGATGAATTTCATTACAAC
CATACTGCTTTTCATGATGATCTTTTTCGTGATGATTTTACTTGGACTCA
TTGACGTATCACCCGGGGCTCTCCCTCTCCTTGATGAGCACTCATGGAAT
GAATTTCTTGAACATCTATTCTAA Coding sequence (CDS) from alignment at sc0000292_pilon:117626..123949- >XLOC_006278 ID=XLOC_006278|Name=XLOC_006278|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1188bp|location=Sequence derived from alignment at sc0000292_pilon:117626..123949- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACATCGAACAACTAGACAAGTCAATGAGCTATCAATCCTTAGAATC
CGCGCGGCGATTGGCGGACGAAATGAAGCAACAAGCGTCCGATTATGCAA
AGGAGGCAGGACATGGTAGAGATGAACATCGAACAACTAGACAAGTCAAT
GAGCTATCAATCCTTAGAATCCGCGCGGCGATTGGCGGACGAAATGAAGC
AACAAGCGTCCGATTATGCAAAGGAGGCAGGACATGGTAGAGTCACCAAT
AATAGCCTTCACGAGGAAAACGAAACTCTACAAATGAAGATTGCAAGACT
GGAAAATGAATGTAAACTTCACCAATAATAGCCTTCACGAGGAAAACGAA
ACTCTACAAATGAAGATTGCAAGACTGGAAAATGAATGTAAACTATTGAG
GCAAGAAAATCAATTACTGTCAAAAGCTCAACCTTCCTCAAGGCCATCAT
GCATTGAGGCAAGAAAATCAATTACTGTCAAAAGCTCAACCTTCCTCAAG
GCCATCATGCTCTCCTTCACCGCAACGTCACAGATTCGAATCCAATACAA
GTACATCTCCTTCACCGCAACGTCACAGATTCGAATCCAATACAAGTACA
CATGGAGATGATGAAAACACGACATCTACCAGCAATAGTATTACTCATGG
AGATGATGAAAACACGACATCTACCAGCAATAGTATTACTCCTGAAGAAC
TTCAAGAACAATTGAAGCTAGCAGAGGAGTCGTTAGAGAAATTGACCACT
GAGCGAACAGATACGATCGAACGTTTCACGCAGAGACAACAGCAATTGCC
TGAAGAACTTCAAGAACAATTGAAGCTAGCAGAGGAGTCGTTAGAGAAAT
TGACCACTGAGCGAACAGATACGATCGAACGTTTCACGCAGAGACAACAG
CAATTGATGAATTTCATTACAACCATACTGCTTTTCATGATGATCTTTTT
CGTGATGATTTTACTTGGACTCATTGACGTATCACCCGGGGCTCTCCCTC
TCCTTGATGAGCACTCATGGAATGAATTTCTTGAACATCTATTCTAAATG
AATTTCATTACAACCATACTGCTTTTCATGATGATCTTTTTCGTGATGAT
TTTACTTGGACTCATTGACGTATCACCCGGGGCTCTCCCTCTCCTTGATG
AGCACTCATGGAATGAATTTCTTGAACATCTATTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000292_pilon | genome | sc0000292_pilon:117626..123949 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 454-594:142 |
| Aaloc | 346-453:989 |
| Aaloc | 301-345:4173 |
| Aaloc | 256-300:4815 |
| Aaloc | 199-255:5203 |
| Aaloc | 124-195:6000 |
| Aaloc | 1-120:6325 |
|
