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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000292_pilon:216435..219215- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006274 ID=XLOC_006274|Name=XLOC_006274|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2781bp|location=Sequence derived from alignment at sc0000292_pilon:216435..219215- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGGAACTTTCATAGCACTTGTGGTCATACTGAGCGTGGCAACATT
CTGCAGTTGTGTTAAACTCAGGTGAGTTTAGGCTGTTTCTACCGTCTTTT
CACATAATACTATCCTTGGTATATAGATATACTATATATACAATATACTA
TATCCTTGGTTTGAAAATATTTTAAATTTCGTCTCCATTGGAGCCCAAAG
TCCTAACAAAGGTAAACTGTTTTTATCCTCTAATATTTTCTCAAAAACTA
CCACGGTTTTTGATTTGTTTCATTAGGTTCTATACCCCTTTCCGCTGAGC
TGTAGTAGGTGTCTAAAGCCTACTTGGGTTTTCAATTATCAAATTTGTCA
AGATTTAAGCAAAATGGACACTTTTGACGATTCCATGCATTTGGAAAGTA
GAAAGTTTTGAAATGTTCTAAAGGAAAATGAGATAAGATGTAAGACTTCT
CCCACCGTGCTCTTGCTAAGAATTCTATTTTCATTATTCTCAGAAATCGG
AAAACCTCCATCAGAAATATTAGAAGAATTGCAGCTGCTCCACAGAAAAA
ACAAGATCTAGAAGAATTGGTTTTAATAGGTGTCAAAAATTACAATGATC
TGATCGTCAACTTGCACAATGGGGCTAAAAAGCTGGAGATCATCGAAAAG
CTCACAAACGTAGCAAAATCCTTGAATAAATTGAACATCGGACTCGACAA
GGAACAACAGCATGCAGTACAGGTTATTCTACGAGTCCATAGAGAATCGG
AGTTCGCTTTAGATCGTGCCAGAGTTGTTATTTCTAAACTGAAGAGTCTC
TGTGGCGGTTTGATCTTGATTCTTGGTGAGGGTCGATCAGATGATGATAT
CAAGTTCGCTATTGAAGTGTTTATGGAAGAAGCAAAGGAAATGGAGAAAC
CTATCCAAGAAGCAATGGATTATATGACGGCAGCTATCACTGGTGCTGCT
ACAGGTTTGCGAGATTACTATATAGTTGACTCTCTCTAATTCGATTTTCA
AGGGGAATAGAATTTTCGTCGAATACGGGAGCGCATCAAATAGTACAATG
TCGTTTATGAGACTTTCTTGTTGACCTTGACTTTTAATATTATCGAATAA
TGGAGCGTATCGAATAGTAGAACGTCGGAATAAAAGAGCGTCAATTGTAT
CTCGAAGCTCTCCTTAAGTCGAGCAAATTTTCTAATCTTTTCAGTTAAAC
AAACCCTTATAAATGTTCTATGATTTGAACAAATTTCAATGCTCCTTGTT
TATCCGAGTTACCTCTAGTAGTATAGTTATACCTTTTTTAGTTCAATCCA
TCACCGATCTAGCGAATGAGGTATAAGTGGTCTAAGTATATTGGAGATGA
GAGTAGTAGGACTAGCAAACCCCATCTCTTTCACGCTCAGTTTTTGAGAT
AGCTTCCAACTAAACGTTTTGGTTCCTTAGTGATCTTCAACAAGGGTTAT
GACTAAACAAAGTGTAATCTTTCTCAAATAATTTTAAACAGCTTGTAAAA
TTTCTTACTAAAATTTGTTATCTTATTTTTCAGTCGAAGGTGAAATGCTC
AAACTGAAATCGTGGGTTAGTAAGAAGAAATCTATAGCCGTATCAAATGA
AAAGGAGATCATCAAAGCGGTACGCGGTGGAGCTTATGGTGGTGCTGGTA
AGTTGATGGCTATCATTCATCAGATATCGATCTTGCATTTTTCATAAGTC
CGAGAACTTTGAAATACGCCAGTTCAATAAAGTGTTTTCCACCATTCCAT
GATACCCTCAATCGTTTCTTGACACTCTGAAGCTTTACTACAATCAGTGC
CAAAATACTTGGCACAAAAGAGAAATTCCCCACGAAATTTTATAACCACA
AACAACTTGGAACTTACAACGTAGGTAGAGTTTCTAACTCTGAGTTTTAA
CGCTAAACTCAAGACTTAGGACCTTAGGATCTGAGGATCCGAAAGTTCAA
AAATAGTCCGGTAGGACTTGAAATATAGCCTAGAAATCAATAAATCCCTC
CCAGATCGAAATATTCGATGAAACCAGGTTGAAGGCCCGAAATTGACATT
CTCGCTCGAACTTCAATTTTCGAAAAATGGTAAAATAGCCAAAATTGCCA
ATATGTTCTGGCACACTGATTGTAGCGACGTTATGCAAAATTTTACAATC
ATAGGTCAGAGGTCTTATACTATAATTAGGTTTTATGTTTTTTTAAGGCA
TGTCTTACTGTCCAACCCTGTAGAGTCTCAAAATCTTATAATTAGCATAA
CTTTTCGGTACAGTCATCCAATTGAGCTATCAAATTAAAAAAAAATACAA
CCTCGCTCCCAAGGCTACTTGTGGACTCGTTTGTGGGCACCATCAGAATC
ATCAATAGTAAACTAAGGGACTGGGTTCGACTTCATTAACCTCCTTCTTG
TTCTGTTTAGCGGTATGTTTATTAACATTGGTTAAACCGATCCTGGCTGT
CATTGTTTGTCCTATAACGTATGGGGTTGTATCAGGCGTCATTGAAGGTC
ACACTATCAAACAAATCGAAAAAGGATTCGATAAAACAATCGAGGAAATC
GAAAAGATGAGTAAAGATATCAAAGCTATTGGGACCAGTACAAACGCCTT
GGTGCAGAAAGTGAAAGTCCACAAAGACAAAGTCAGCGATATCCGAATGA
CTTTACATGACACTCTCAACCGTGGAAAAATCGTCGGCTACAGATTTAAA
GTACGCTTTTACAACGAGTTCAAAAAGTTTTTGAATTTGTTGTATAAGAA
ATGTGAAAGTTATCTCCAAAGCAAAAAGTAA Coding sequence (CDS) from alignment at sc0000292_pilon:216435..219215- >XLOC_006274 ID=XLOC_006274|Name=XLOC_006274|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2034bp|location=Sequence derived from alignment at sc0000292_pilon:216435..219215- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGGAACTTTCATAGCACTTGTGGTCATACTGAGCGTGGCAACATT
CTGCAGTTGTGTTAAACTCAGATGAAGGGAACTTTCATAGCACTTGTGGT
CATACTGAGCGTGGCAACATTCTGCAGTTGTGTTAAACTCAGAAATCGGA
AAACCTCCATCAGAAATATTAGAAGAATTGCAGCTGCTCCACAGAAAAAA
CAAGATCTAGAAGAATTGGTTTTAATAGGTGTCAAAAATTACAATGATCT
GATCGTCAACTTGCACAATGGGGCTAAAAAGCTGGAGATCATCGAAAAGC
TCACAAACGTAGCAAAATCCTTGAATAAATTGAACATCGGACTCGACAAG
GAACAACAGCATGCAGTACAGGTTATTCTACGAGTCCATAGAGAATCGGA
GTTCGCTTTAGATCGTGCCAGAGTTGTTATTTCTAAACTGAAGAGTCTCT
GTGGCGGTTTGATCTTGATTCTTGGTGAGGGTCGATCAGATGATGATATC
AAGTTCGCTATTGAAGTGTTTATGGAAGAAGCAAAGGAAATGGAGAAACC
TATCCAAGAAGCAATGGATTATATGACGGCAGCTATCACTGGTGCTGCTA
CAGAAATCGGAAAACCTCCATCAGAAATATTAGAAGAATTGCAGCTGCTC
CACAGAAAAAACAAGATCTAGAAGAATTGGTTTTAATAGGTGTCAAAAAT
TACAATGATCTGATCGTCAACTTGCACAATGGGGCTAAAAAGCTGGAGAT
CATCGAAAAGCTCACAAACGTAGCAAAATCCTTGAATAAATTGAACATCG
GACTCGACAAGGAACAACAGCATGCAGTACAGGTTATTCTACGAGTCCAT
AGAGAATCGGAGTTCGCTTTAGATCGTGCCAGAGTTGTTATTTCTAAACT
GAAGAGTCTCTGTGGCGGTTTGATCTTGATTCTTGGTGAGGGTCGATCAG
ATGATGATATCAAGTTCGCTATTGAAGTGTTTATGGAAGAAGCAAAGGAA
ATGGAGAAACCTATCCAAGAAGCAATGGATTATATGACGGCAGCTATCAC
TGGTGCTGCTACAGTCGAAGGTGAAATGCTCAAACTGAAATCGTGGGTTA
GTAAGAAGAAATCTATAGCCGTATCAAATGAAAAGGAGATCATCAAAGCG
GTACGCGGTGGAGCTTATGGTGGTGCTGTCGAAGGTGAAATGCTCAAACT
GAAATCGTGGGTTAGTAAGAAGAAATCTATAGCCGTATCAAATGAAAAGG
AGATCATCAAAGCGGTACGCGGTGGAGCTTATGGTGGTGCTGCGGTATGT
TTATTAACATTGGTTAAACCGATCCTGGCTGTCATTGTTTGTCCTATAAC
GTATGGGGTTGTATCAGGCGTCATTGAAGGTCACACTATCAAACAAATCG
AAAAAGGATTCGATAAAACAATCGAGGAAATCGAAAAGATGAGTAAAGAT
ATCAAAGCTATTGGGACCAGTACAAACGCCTTGGTGCAGAAAGTGAAAGT
CCACAAAGACAAAGTCAGCGATATCCGAATGACTTTACATGACACTCTCA
ACCGTGGAAAAATCGTCGGCTACAGATTTAAAGTACGCTTTTACAACGAG
TTCAAAAAGTTTTTGAATTTGTTGTATAAGAAATGTGAAAGTTATCTCCA
AAGCAAAAAGTAACGGTATGTTTATTAACATTGGTTAAACCGATCCTGGC
TGTCATTGTTTGTCCTATAACGTATGGGGTTGTATCAGGCGTCATTGAAG
GTCACACTATCAAACAAATCGAAAAAGGATTCGATAAAACAATCGAGGAA
ATCGAAAAGATGAGTAAAGATATCAAAGCTATTGGGACCAGTACAAACGC
CTTGGTGCAGAAAGTGAAAGTCCACAAAGACAAAGTCAGCGATATCCGAA
TGACTTTACATGACACTCTCAACCGTGGAAAAATCGTCGGCTACAGATTT
AAAGTACGCTTTTACAACGAGTTCAAAAAGTTTTTGAATTTGTTGTATAA
GAAATGTGAAAGTTATCTCCAAAGCAAAAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000292_pilon | genome | sc0000292_pilon:216435..219215 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 649-1017:370 |
| Aaloc | 535-645:1247 |
| Aaloc | 73-531:2288 |
| Aaloc | 1-69:2782 |
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