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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000202_pilon:93608..95627+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006117 ID=XLOC_006117|Name=XLOC_006117|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2020bp|location=Sequence derived from alignment at sc0000202_pilon:93608..95627+ (Clytia hemisphaerica_ch_hm2_pilon)
GGGACcaaggagaagaaaaaaatggcaCTCAAGCTAAGGTAATGAGTCTA
CTATATTTCAgtcttagaaaaattttcaaaacttcgaCCTACCTTCGACT
TAGAGCCTTTTATCTATTTTATACGGTATAAATTCTGTATTGAAGAACTC
GTTGAAGAAgggaaacacccctgtctcagtgaaggaaaataaaagaattt
catCGGGTACTTACTTTTAATGACGTGAAAAAACTCAATAGGATGGTAAA
ATGTTTACCGCCAGACATCTTGATTAGGGAAAGGTTCTATTCTTCTTTAA
GGGCGAGAGTATTGAGTTTTTGctctcccagctggcacacaacgtttttt
cgacgttcatctaacgttcacaacgtccatataacgttagattaacgttg
aaacaacgttgtgtgccaactgggctCTTAAAGAAACCTGCAAATAAAAC
TCCATGTTCTTAATGTACTATTCAAACGTTTAGTATTTTAGCATCGTTAC
TGGTGGCAtatttgctgattcagcatatATCATGCAGACTCGTTCCAGCC
CCCTCATCTTCGACTTCGACACTTCCATCCAAGTCAGAGTATGTACCTGA
CCCAATGGCGTCGAGAATCATGCCAACCCCAACACAATCACAAATTGTCC
CTATACCTTACTCAACACGAGTTATGACAACTGAATTCGAAATTGATGAT
GGCAAAAGAACCGAAACTACATCCAGTGAAGCAAGCCCTGCTCGAAAAGc
atctactgaaacaacaacaACTGAAGTCACAACCAGTGAAATGATGTCTA
CCGAAAATGTATCCACTGGAACGATATCACCACCCTTATCAGTGATTACC
ACTGAAATAAATACATATACTGAAATAACATCAACTGAAGTCACATCCAA
TGAGACGACAACCGAAAATATAATCGCTGGGATGGTTCCCAGGGACGAGC
TTGAATGTGTCGCATTTTGTCTTATTCTTCGAAAAACATCAAACCGAAAG
ACTGCTCAAGCATGTAAATACGAATGTTCACATAGATTCGTTCCCAGTCC
CAAACCAACAGATTTTGACAAGTGTGAATCAGAATGTAAGGTAGAAAGAA
AAAGGTGTGAAAACCCTGGCCCAGAAACTGAATTATTGGTCGATTGTGAA
GAGGAAGATAGATTATGTAAAAGAACTTGTTTGGTACATTTCAAAGGAGA
TGGCTTTGAGAACAAATTCACCACGAATAATCCGTTGACCACAGATGAAC
ACGAAAGTACAACTCCAGGAGATGAGTATGTGCAAACAACTGACGAATTA
TGTTTTACCGGATGTAAAGTCAAACAACGTATTTGCTTCACAATCAAAAC
TGAAGATTTCCAAGAAACTCTCCTGTGTATGCAAGCTTGTTCAGACACTT
GCTTGCATCATTGTAAAGCGaaaaaaaTTCCAGCCGTGAAGCCGACTACA
AAAAGAATCCTTAGTACGTGTTTGACAGAGTGTAAAAAGGAGCAGGTTTC
TTGTCTAGAAGTTGAATATCGCGACCCCATTATTTGTGTAAGAGCTTCAA
ATCTCTGCAAAGAAAAATGTAACCGAGCGACTACCATGTTGAAACGAACT
AGTTCCGTAGTCAGGGGACTCGCGTTACAATCTTCCGGCAAGCTTCCACG
ATTAAAAATCTCTACCTCCGTATCTGACACCCGACAAGAGAAGCTAGGAT
CACTGCGATCGCTCAACCTTGTTGAATGGTTAACAAAAAGAAAAGGGCGG
TCCTCGAAATCACCAATAAGTACAGCTACCtcagaaaatgaagaaagatc
ATCCACAGCAACACCACGCCTTTCAACGCCCTCATTCCACCAAAGTGTAG
ATTCAAACCCACTAGAAGAACAGTGCCTCGAACAATGCAGAAGAGAAAAG
AGAATTTGTTGGGTAGATTGGGAAGATTCTACCCTTTGTTTCCAACTCTT
CAACTTGTGCAATGGGGATtgtaactttttgtgttggcgGGGGGTAGAAT
TTAAGAATGAGGGGTACTAG Coding sequence (CDS) from alignment at sc0000202_pilon:93608..95627+ >XLOC_006117 ID=XLOC_006117|Name=XLOC_006117|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3150bp|location=Sequence derived from alignment at sc0000202_pilon:93608..95627+ (Clytia hemisphaerica_ch_hm2_pilon)
GGGACcaaggagaagaaaaaaatggcaCTCAAGCTAAGGGGACcaaggag
aagaaaaaaatggcaCTCAAGCTAAGTATTTTAGCATCGTTACTGGTGGC
AtatttgctgattcagcatatATCATGCAGACTCGTTCCAGCCCCCTCAT
CTTCGACTTCGACACTTCCATCCAAGTCAGAGTATGTACCTGACCCAATG
GCGTCGAGAATCATGCCAACCCCAACACAATCACAAATTGTCCCTATACC
TTACTCAACACGAGTTATGACAACTGAATTCGAAATTGATGATGGCAAAA
GAACCGAAACTACATCCAGTGAAGCAAGCCCTGCTCGAAAAGcatctact
gaaacaacaacaACTGAAGTCACAACCAGTGAAATGATGTCTACCGAAAA
TGTATCCACTGGAACGATATCACCACCCTTATCAGTGATTACCACTGAAA
TAAATACATATACTGAAATAACATCAACTGAAGTCACATCCAATGAGACG
ACAACCGAAAATATAATCGCTGGGATGGTTCCCAGGGACGAGCTTGAATG
TGTCGCATTTTGTCTTATTCTTCGAAAAACATCAAACCGAAAGACTGCTC
AAGCATGTAAATACGAATGTTCACATAGATTCGTTCCCAGTCCCAAACCA
ACAGATTTTGACAAGTGTGAATCAGAATGTAAGGTAGAAAGAAAAAGGTG
TGAAAACCCTGGCCCAGAAACTGAATTATTGGTCGATTGTGAAGAGGAAG
ATAGATTATGTAAAAGAACTTGTTTGGTACATTTCAAAGGAGATGGCTTT
GAGAACAAATTCACCACGAATAATCCGTTGACCACAGATGAACACGAAAG
TACAACTCCAGGAGATGAGTATGTGCAAACAACTGACGAATTATGTTTTA
CCGGATGTAAAGTCAAACAACGTATTTGCTTCACAATCAAAACTGAAGAT
TTCCAAGAAACTCTCCTGTGTATGCAAGCTTGTTCAGACACTTGCTTGCA
TCATTGTAAAGCGaaaaaaaTTCCAGCCGTGAAGCCGACTACAAAAAGAA
TCCTTAGTACGTGTTTGACAGAGTGTAAAAAGGAGCAGGTTTCTTGTCTA
GAAGTTGAATATCGCGACCCCATTATTTGTGTAAGAGCTTCAAATCTCTG
CAAAGAAAAATGTAACCGAGCGACTACCATGTTGAAACGAACTAGTTCCG
TAGTCAGGGGACTCGCGTTACAATCTTCCGGCAAGCTTCCACGATTAAAA
ATCTCTACCTCCGTATCTGACACCCGACAAGAGAAGCTAGGATCACTGCG
ATCGCTCAACCTTGTTGAATGGTTAACAAAAAGAAAAGGGCGGTCCTCGA
AATCACCAATAAGTACAGCTACCtcagaaaatgaagaaagatcATCCACA
GCAACACCACGCCTTTCAACGCCCTCATTCCACCAAAGTGTAGATTCAAA
CCCACTAGAAGAACAGTGCCTCGAACAATGCAGAAGAGAAAAGAGAATTT
GTTGGGTAGATTGGGAAGATTCTACCCTTTGTTTCCAACTCTTCAACTTG
TGCAATGGGGATtgtaactttttgtgttggcgGGGGGTAGAATTTAAGAA
TGAGGGGTACTAGTATTTTAGCATCGTTACTGGTGGCAtatttgctgatt
cagcatatATCATGCAGACTCGTTCCAGCCCCCTCATCTTCGACTTCGAC
ACTTCCATCCAAGTCAGAGTATGTACCTGACCCAATGGCGTCGAGAATCA
TGCCAACCCCAACACAATCACAAATTGTCCCTATACCTTACTCAACACGA
GTTATGACAACTGAATTCGAAATTGATGATGGCAAAAGAACCGAAACTAC
ATCCAGTGAAGCAAGCCCTGCTCGAAAAGcatctactgaaacaacaacaA
CTGAAGTCACAACCAGTGAAATGATGTCTACCGAAAATGTATCCACTGGA
ACGATATCACCACCCTTATCAGTGATTACCACTGAAATAAATACATATAC
TGAAATAACATCAACTGAAGTCACATCCAATGAGACGACAACCGAAAATA
TAATCGCTGGGATGGTTCCCAGGGACGAGCTTGAATGTGTCGCATTTTGT
CTTATTCTTCGAAAAACATCAAACCGAAAGACTGCTCAAGCATGTAAATA
CGAATGTTCACATAGATTCGTTCCCAGTCCCAAACCAACAGATTTTGACA
AGTGTGAATCAGAATGTAAGGTAGAAAGAAAAAGGTGTGAAAACCCTGGC
CCAGAAACTGAATTATTGGTCGATTGTGAAGAGGAAGATAGATTATGTAA
AAGAACTTGTTTGGTACATTTCAAAGGAGATGGCTTTGAGAACAAATTCA
CCACGAATAATCCGTTGACCACAGATGAACACGAAAGTACAACTCCAGGA
GATGAGTATGTGCAAACAACTGACGAATTATGTTTTACCGGATGTAAAGT
CAAACAACGTATTTGCTTCACAATCAAAACTGAAGATTTCCAAGAAACTC
TCCTGTGTATGCAAGCTTGTTCAGACACTTGCTTGCATCATTGTAAAGCG
aaaaaaaTTCCAGCCGTGAAGCCGACTACAAAAAGAATCCTTAGTACGTG
TTTGACAGAGTGTAAAAAGGAGCAGGTTTCTTGTCTAGAAGTTGAATATC
GCGACCCCATTATTTGTGTAAGAGCTTCAAATCTCTGCAAAGAAAAATGT
AACCGAGCGACTACCATGTTGAAACGAACTAGTTCCGTAGTCAGGGGACT
CGCGTTACAATCTTCCGGCAAGCTTCCACGATTAAAAATCTCTACCTCCG
TATCTGACACCCGACAAGAGAAGCTAGGATCACTGCGATCGCTCAACCTT
GTTGAATGGTTAACAAAAAGAAAAGGGCGGTCCTCGAAATCACCAATAAG
TACAGCTACCtcagaaaatgaagaaagatcATCCACAGCAACACCACGCC
TTTCAACGCCCTCATTCCACCAAAGTGTAGATTCAAACCCACTAGAAGAA
CAGTGCCTCGAACAATGCAGAAGAGAAAAGAGAATTTGTTGGGTAGATTG
GGAAGATTCTACCCTTTGTTTCCAACTCTTCAACTTGTGCAATGGGGATt
gtaactttttgtgttggcgGGGGGTAGAATTTAAGAATGAGGGGTACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000202_pilon | genome | sc0000202_pilon:93608..95627 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 901-1578:1343 |
| Aaloc | 40-897:485 |
| Aaloc | 1-36:1 |
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