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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000045_pilon:1036332..1041857+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006063 ID=XLOC_006063|Name=XLOC_006063|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5526bp|location=Sequence derived from alignment at sc0000045_pilon:1036332..1041857+ (Clytia hemisphaerica_ch_hm2_pilon) ATGaagaagatttttctttttatcgtATATCTATCACAAATCACCTTTAC
GCAAGCACGCTGGGAGGTCAACAGACAAAGAACGCATGATGATATCATAG
AGAAGCCGCGGACCGCTTCATGTGACCGATTGGAGTACAACCGTCTGGAT
GAAGGTGATTGTAGATGCCCACGAAAGATTTTTCACGTTTACAGCAAAAC
AGAGTATGGTTGTTATGATGCTGAAGCATTTTGCGAGACAGAGCTTTCAA
GGAAATGGTTGGTTAAAGGTGACTTTTATTAGCTGTCATTAAAATAAAAG
GATTTTTCAGTTTAATTATGGAACGCAGCTTCCGTAGTAATAGAACGAAG
CATTCCAGAAGCAAGACCTCTTTATTTGGTTTGAGCATTTCTTTACATTG
TACGCGAGTCTTTGTTACTAGAAATAGttagaaagtttttaaaatctatG
CAGATTTGGTAAAGCCATTCATATACACATTCCTTCCCACTAGTGTGTTT
GCTttattaaccctatttttatcaggggggggtgttttccaccaggctgg
cactcttttgttaatagctcactgaaaattttttttaacactctgaaagt
ttttgacttttaatataatcctattagcagcatgtataccaaattttaca
attatacaccgaccagatcaggttttatgactttttagttcaggcatatc
ataaaatccagctaaaaccgtgtaaaatcccaaaatcttaaatttagcat
aacttctGATCTAGTTATccaattgacttcaaaatttgacaggttttagg
tatcaataataaattttgaaaaatatttttaaaattttcaaaaattgctg
acctcatcaaaaattacgtcattgttttttgaaaaaatttactcattttc
tgcatggattttaaacctcgattttattagtatgttaaaaaccggcagat
atgttaaagatattctttttggcttttggaaattcaaaacagaactgaaa
aatctccattcatTCAACTTTAAtagctattttattgaatagtacttttt
cattggtcagcgataattgtgaaactttgtgatgacgtcatcacctttat
gatgacgtcatcaattcaattttttttctatgaatTCCTTTTATAGTAGA
AAAtatttgtgccaaatttcaagtccatacctttcctaaatcaaaagtta
tgcaaggctggtggaaaacacccccccttgagaatacaaaatccgaaaaa
gcctgataataatagggttaaacgTGACCCTCCAAGAGCAATGTTCACTA
ATGAACAATTAAACTaattttttcgagttatggagtaaggtttataaggc
attggtAACTGAATGCAAGCTTAAAACTAGTATTTAATCACACTGTATTT
CTCCTTTTATATTATGGAAATATCATTACATTGTCATAAAAATTTGCTTT
CTTTCATAAATTTTGTGGCCTTCTTGCCTACACTACTGGAAGGGACCATA
ACAATCTTTCGAATTACCTTACTATTACCTAACCGTTTCACAAAATTTGA
GCTGAGGTAATTTTCGATCGAAAACACTGCCTTTAAAAACTAAGTTCGCA
CACGTTTTTCCTGCGTTACATAAATTATGTTCgagttaaaaatgttttct
gACATAAATCTCACAGACAGAAGCTTGATCATTTAGAAGTTGTACGAAGA
AAGTTAATCAAAATTTGTCGGAAATAAATACTTGTAACGAAGGGCATCTT
TtaactattttgaaattttgtttccaGACTCGCGATGTCACCTTGCCAAC
GGCATGCTATGGAAATACGAATCAAGAAACGGCAAGACAAATCAAATATT
ACACTTCAATGCCGATCATTTGAATGACAACATGCACGCATGCGCAGTAG
GAGATGAATCGAATTTGAAAGTCACCACAAGTTATTGGGATGAAGAAAAA
GGTTGGAAGAGTGCTAATAGTGGTAATGATGGATCAATGAAATTGGGGAA
ACTAAGAATGAGACCGGATTCAAGACAGGTGAGAGAAATAATGACTTTTA
AGAGAAATTCCCTAGAAAGAGattttcttaagatttttttattctgaATG
TGACACGTGACAAAACAAAGGATATTACAAATGAAACGAGATGCGAACTA
AATAAAAAGAGCAAAACCAaacacacccctttctcacagatccactgaGA
ACCTTTCCCAAtggaaaaattgtcaaaaatatcgTTCCCTgttgaaaatt
atactccagTTTTTGTCCCCgcagaaaataatcagataagcaaatcctca
ctataaaatattgtgctaatatttccatccccactgaattatctgtctaa
aaaacaataaaattcaacTCCCCAGCCTTAAAAGGACATaaggaatatca
atcccaatcgagttttggtccattatttttacccccaccggctgataaaa
tcccataggtctgtgagaagggggtatgtAAATCAAGTGTACATCAAAGA
ATTTAACTAAACTTCATCCCTTTTTGTAGGTCCAAATTTCAGCAAACATA
GACCATGGTGTCGGATTGTTTCGAATCAAGATTCAGTGTCCACTAGAAGA
AAGATTTGCTTTCTTTGTCCGAATCATTGGAAAAGGTAAGTTCTATTTCA
AACCTTAGGATAACAGGGTCACCAAATGGTTTTGTAACTGATCAGAGCCT
TTTCATCTGGATGGAATAGaaaaaaaTAGGCACCTTTTTGGTAGCATGGG
TGCAGTTTCTTGTTCGCCAGACTGGAAATAATGTGAGAGTCTGATGTAAA
AGATAgctctaaaatcatttttgcattAGATGTAATCTTATCGCGAGCAG
TTCTTATAAGTAGTTTGAATGTTTTCTgatattaaatgtttttttataat
tcctTAAAAAACTTCTACCCTCAATAAGTGGAAGTTATGTGTGAAATCAC
CATTTATCCTAAATTTCTGTTTCCTTCCAGCGATCTACAAAACTTCTGGG
CCATCTTTGAGGAAACTCACCAAATCAACAACACCTTCAACAGAGATGGT
GGAAACACCTCCCCCACGTGAACCGAATATCGATTATGTTGGACCAGTCA
CTCGATGGTTGAAACTGTTGCCAACAATCAAAGTATATCCGACACTACCA
AAGACGAAACGTATTGAATACCCCAATGAGATTGTTGTTAAAACTACACA
AAGAACTTTCACCTATCCATCAACCAAACAGTCCGTAAACAAAAACGAAA
AGATGGAAATTACAAACTCCCCGAATGAGATTTTAGGAGACATTACACCA
AAAATTACCAGCTCAGATTCAACAAACAAAGTTTCTGAAAACAATAACGG
AAAGACAGAACCTACAAACTCTCCCAATGAGATTGTTGTAGAATCTTCTC
CTCGGGTAGACTACGAAATCATGTCTCATCCACCAACCAAAGCTATTGGA
AACAGTCTGATTGAGATGTCTTCACCAGAGATTGACTATTCAAATCGACC
AACAGATTCTACAAAAgctgaacaaaaaaataacgTTGAGTTTACGTCCT
TATTGTCAATTGAAAATGAACATCAATCAACAAAGATTCCTGGAGTTGGT
GAAAGTAAAGAGCAGGCAAAAACTTCTTCTCCAAATATTGAATACAAATT
AACAAGAGAAGCCAAAATTGATAACAATTCGATAGAGACAACCTCGAATT
CTAATCACAGAGGAGAGATCAGTAACGGAAGGAAGACACCAACGAGAACT
ACCAGCGTTGATGTAAACTCAATAGAGACATCATCCAGAACGGATCTTCC
GATCACAAGACATCATCCAAACAAATCCATCAAAGAAGGTCATGCTATAG
GTACAAACACTCTTACAGACAACAACGACATTGACTTAACGATTGACTTA
GAAACACCAACTCCACATACTTCAAGAGTATTTGACAAATTAGCAATTcg
tcaaaaaacaacaaaaataccTAGTAATCTGTTTACAAACTACAAAGACT
TATCTAACAATTTGGAGAATCCTACGAAAGAAATTTCGACGGATGATATT
TCAAATTGGAGACAAGTGGACAAAACCTTATCTCCAACCAGAACTTTAAA
CAGTAAAGATAATGATTTGAGCAACAACTATGAAATTTCTCCAAATGACA
ACATCCAAACGACgaatgacatttcaaaatggaCACAAGTTGACAAGACC
TCATCTCTCACCAAAACTCCAAACATTAAAGATACTGActcaaacaaaaa
cttgaaaatttctccaacaGACAATCTCAAAAAGACAAACGACATTTCAA
AATGGACACAAGTTGACAAGACCTCATCTCTTACAGAAACTTCAAACAGA
AAAGATATTAACTCAACCAACAACTTGGATATTTCTCCAACTGAAAGCAT
CAAAGTTACTGATGATATTTCAAAATGGGTACCAATTGCAAAAACCTCAT
CTCCAACCAAAACTTTAAATAACAAAGATATTGACTTGCCCAACAGCTTG
GAGATTTCTTCAACAGACGACATCCAAACGacgaatgaaatttcaaaatg
ggcACAAGTTGACAAGACCTCATCTccaacaaaaacttcaaacattaAAG
ATACTGACgcaaatgaaaatttgaaaacctctccaacaaaaaataccaaa
aatactgatgacaattcaaaaCGTACACAAGTTGACGAGACCTCATCTCT
AACCaaaactccaaacaaaaaagataatggctcaaacaaaaacttgaaga
tCTCTCCAACAGACAATCTCAAAAAGACTGATGAGAATTCAAAATGGACA
CAAGTTGACGAGACCTCATCTCCAACAAAAAGCATTGACGCTTCGACTGA
AACTCCAGAAGAATCTTTCTCGTCTTCTAATACTGAGGGTGGTTTCATCG
ACTTATCTGATTTACTATGGGAATCAttaaaattctttgaagagaattAT
GAAAGTACAACTGAACAACCTAATGAGCTAAGTTCCACGCAAATGCCAAC
CACTgaagattttgaagatttctatACTTATTCTAGGGGCACTAAGAAAG
CTACTACAGATTCGATACCGTTTGAGACAATACCAACAATTTTTGTAGAT
TCTCACTCTTCAACTAAGAATTCTAACGTCAAAACTAATCCAACTATTTT
AACAGAAACCACTGACTTTACAGAGATTAAGACAACTTCAACTTCCAAAG
ATAAGACTCCATATTCAGTAAAACCTGAAACAACCGGAAATAATATTGaa
attgattctaaaaatcCTACTGATACAATCACCGGAACGCCAGATCCAAT
GAAAACAAGAGAACATATAACAGGAAAAACACTTACAGGTTCCTCAAACA
ACCTATTGTTTGGTATTTCAACGGCAACTTTGTCACAATCACCAACTGAA
ACTCCAGAAGAATCTTTCTCATCTTCTAACACTAAAAATCACTTCATCGA
CTTATCCGATTTATTATGGGAATCATTAAAATTCTACGAGGAGAATTATG
GAAGTACAACTGAACTACCTAATGAG Coding sequence (CDS) from alignment at sc0000045_pilon:1036332..1041857+ >XLOC_006063 ID=XLOC_006063|Name=XLOC_006063|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6096bp|location=Sequence derived from alignment at sc0000045_pilon:1036332..1041857+ (Clytia hemisphaerica_ch_hm2_pilon) ATGaagaagatttttctttttatcgtATATCTATCACAAATCACCTTTAC GCAAGCACGCTGGGAGGTCAACAGACAAAGAACGCATGATGATATCATAG AGAAGCCGCGGACCGCTTCATGTGACCGATTGGAGTACAACCGTCTGGAT GAAGGTGATTGTAGATGCCCACGAAAGATTTTTCACGTTTACAGCAAAAC AGAGTATGGTTGTTATGATGCTGAAGCATTTTGCGAGACAGAGCTTTCAA GGAAATGGTTGGTTAAAGATGaagaagatttttctttttatcgtATATCT ATCACAAATCACCTTTACGCAAGCACGCTGGGAGGTCAACAGACAAAGAA CGCATGATGATATCATAGAGAAGCCGCGGACCGCTTCATGTGACCGATTG GAGTACAACCGTCTGGATGAAGGTGATTGTAGATGCCCACGAAAGATTTT TCACGTTTACAGCAAAACAGAGTATGGTTGTTATGATGCTGAAGCATTTT GCGAGACAGAGCTTTCAAGGAAATGGTTGGTTAAAGACTCGCGATGTCAC CTTGCCAACGGCATGCTATGGAAATACGAATCAAGAAACGGCAAGACAAA TCAAATATTACACTTCAATGCCGATCATTTGAATGACAACATGCACGCAT GCGCAGTAGGAGATGAATCGAATTTGAAAGTCACCACAAGTTATTGGGAT GAAGAAAAAGGTTGGAAGAGTGCTAATAGTGGTAATGATGGATCAATGAA ATTGGGGAAACTAAGAATGAGACCGGATTCAAGACAGACTCGCGATGTCA CCTTGCCAACGGCATGCTATGGAAATACGAATCAAGAAACGGCAAGACAA ATCAAATATTACACTTCAATGCCGATCATTTGAATGACAACATGCACGCA TGCGCAGTAGGAGATGAATCGAATTTGAAAGTCACCACAAGTTATTGGGA TGAAGAAAAAGGTTGGAAGAGTGCTAATAGTGGTAATGATGGATCAATGA AATTGGGGAAACTAAGAATGAGACCGGATTCAAGACAGGTCCAAATTTCA GCAAACATAGACCATGGTGTCGGATTGTTTCGAATCAAGATTCAGTGTCC ACTAGAAGAAAGATTTGCTTTCTTTGTCCGAATCATTGGAAAAGGTCCAA ATTTCAGCAAACATAGACCATGGTGTCGGATTGTTTCGAATCAAGATTCA GTGTCCACTAGAAGAAAGATTTGCTTTCTTTGTCCGAATCATTGGAAAAG CGATCTACAAAACTTCTGGGCCATCTTTGAGGAAACTCACCAAATCAACA ACACCTTCAACAGAGATGGTGGAAACACCTCCCCCACGTGAACCGAATAT CGATTATGTTGGACCAGTCACTCGATGGTTGAAACTGTTGCCAACAATCA AAGTATATCCGACACTACCAAAGACGAAACGTATTGAATACCCCAATGAG ATTGTTGTTAAAACTACACAAAGAACTTTCACCTATCCATCAACCAAACA GTCCGTAAACAAAAACGAAAAGATGGAAATTACAAACTCCCCGAATGAGA TTTTAGGAGACATTACACCAAAAATTACCAGCTCAGATTCAACAAACAAA GTTTCTGAAAACAATAACGGAAAGACAGAACCTACAAACTCTCCCAATGA GATTGTTGTAGAATCTTCTCCTCGGGTAGACTACGAAATCATGTCTCATC CACCAACCAAAGCTATTGGAAACAGTCTGATTGAGATGTCTTCACCAGAG ATTGACTATTCAAATCGACCAACAGATTCTACAAAAgctgaacaaaaaaa taacgTTGAGTTTACGTCCTTATTGTCAATTGAAAATGAACATCAATCAA CAAAGATTCCTGGAGTTGGTGAAAGTAAAGAGCAGGCAAAAACTTCTTCT CCAAATATTGAATACAAATTAACAAGAGAAGCCAAAATTGATAACAATTC GATAGAGACAACCTCGAATTCTAATCACAGAGGAGAGATCAGTAACGGAA GGAAGACACCAACGAGAACTACCAGCGTTGATGTAAACTCAATAGAGACA TCATCCAGAACGGATCTTCCGATCACAAGACATCATCCAAACAAATCCAT CAAAGAAGGTCATGCTATAGGTACAAACACTCTTACAGACAACAACGACA TTGACTTAACGATTGACTTAGAAACACCAACTCCACATACTTCAAGAGTA TTTGACAAATTAGCAATTcgtcaaaaaacaacaaaaataccTAGTAATCT GTTTACAAACTACAAAGACTTATCTAACAATTTGGAGAATCCTACGAAAG AAATTTCGACGGATGATATTTCAAATTGGAGACAAGTGGACAAAACCTTA TCTCCAACCAGAACTTTAAACAGTAAAGATAATGATTTGAGCAACAACTA TGAAATTTCTCCAAATGACAACATCCAAACGACgaatgacatttcaaaat ggaCACAAGTTGACAAGACCTCATCTCTCACCACGATCTACAAAACTTCT GGGCCATCTTTGAGGAAACTCACCAAATCAACAACACCTTCAACAGAGAT GGTGGAAACACCTCCCCCACGTGAACCGAATATCGATTATGTTGGACCAG TCACTCGATGGTTGAAACTGTTGCCAACAATCAAAGTATATCCGACACTA CCAAAGACGAAACGTATTGAATACCCCAATGAGATTGTTGTTAAAACTAC ACAAAGAACTTTCACCTATCCATCAACCAAACAGTCCGTAAACAAAAACG AAAAGATGGAAATTACAAACTCCCCGAATGAGATTTTAGGAGACATTACA CCAAAAATTACCAGCTCAGATTCAACAAACAAAGTTTCTGAAAACAATAA CGGAAAGACAGAACCTACAAACTCTCCCAATGAGATTGTTGTAGAATCTT CTCCTCGGGTAGACTACGAAATCATGTCTCATCCACCAACCAAAGCTATT GGAAACAGTCTGATTGAGATGTCTTCACCAGAGATTGACTATTCAAATCG ACCAACAGATTCTACAAAAgctgaacaaaaaaataacgTTGAGTTTACGT CCTTATTGTCAATTGAAAATGAACATCAATCAACAAAGATTCCTGGAGTT GGTGAAAGTAAAGAGCAGGCAAAAACTTCTTCTCCAAATATTGAATACAA ATTAACAAGAGAAGCCAAAATTGATAACAATTCGATAGAGACAACCTCGA ATTCTAATCACAGAGGAGAGATCAGTAACGGAAGGAAGACACCAACGAGA ACTACCAGCGTTGATGTAAACTCAATAGAGACATCATCCAGAACGGATCT TCCGATCACAAGACATCATCCAAACAAATCCATCAAAGAAGGTCATGCTA TAGGTACAAACACTCTTACAGACAACAACGACATTGACTTAACGATTGAC TTAGAAACACCAACTCCACATACTTCAAGAGTATTTGACAAATTAGCAAT TcgtcaaaaaacaacaaaaataccTAGTAATCTGTTTACAAACTACAAAG ACTTATCTAACAATTTGGAGAATCCTACGAAAGAAATTTCGACGGATGAT ATTTCAAATTGGAGACAAGTGGACAAAACCTTATCTCCAACCAGAACTTT AAACAGTAAAGATAATGATTTGAGCAACAACTATGAAATTTCTCCAAATG ACAACATCCAAACGACgaatgacatttcaaaatggaCACAAGTTGACAAG ACCTCATCTCTCACCAAAACTTCAAACAGAAAAGATATTAACTCAACCAA CAACTTGGATATTTCTCCAACTGAAAGCATCAAAGTTACTGATGATATTT CAAAATGGGTACCAATTGCAAAAACCTCATCTCCAACCAAAACTTTAAAT AACAAAGATATTGACTTGCCCAACAGCTTGGAGATTTCTTCAACAGACGA CATCCAAACGacgaatgaaatttcaaaatgggcACAAGTTGACAAGACCT CATCTccaacaaaaacttcaaacattaAAGATACTGACgcaaatgaaaat ttgaaaacctctccaacaaaaaataccaaaaatactgatgacaattcaaa aCGTACACAAGTTGACGAGACCTCATCTCTAACCaaaactccaaacaaaa aagataatggctcaaacaaaaacttgaagatCTCTCCAACAGACAATCTC AAAAAGACTGATGAGAATTCAAAATGGACACAAGTTGACGAGACCTCATC TCCAACAAAAAGCATTGACGCTTCGACTGAAACTCCAGAAGAATCTTTCT CGTCTTCTAATACTGAGGGTGGTTTCATCGACTTATCTGATTTACTATGG GAATCAttaaaattctttgaagagaattATGAAAGTACAACTGAACAACC TAATGAGCTAAGTTCCACGCAAATGCCAACCACTgaagattttgaagatt tctatACTTATTCTAGGGGCACTAAGAAAGCTACTACAGATTCGATACCG TTTGAGACAATACCAACAATTTTTGTAGATTCTCACTCTTCAACTAAGAA TTCTAACGTCAAAACTAATCCAACTATTTTAACAGAAACCACTGACTTTA CAGAGATTAAGACAACTTCAACTTCCAAAGATAAGACTCCATATTCAGTA AAACCTGAAACAACCGGAAATAATATTGaaattgattctaaaaatcCTAC TGATACAATCACCGGAACGCCAGATCCAATGAAAACAAGAGAACATATAA CAGGAAAAACACTTACAGGTTCCTCAAACAACCTATTGTTTGGTATTTCA ACGGCAACTTTGTCACAATCACCAACTGAAACTCCAGAAGAATCTTTCTC ATCTTCTAACACTAAAAATCACTTCATCGACTTATCCGATTTATTATGGG AATCATTAAAATTCTACGAGGAGAATTATGGAAGTACAACTGAACTACCT AATGAGAAACTTCAAACAGAAAAGATATTAACTCAACCAACAACTTGGAT ATTTCTCCAACTGAAAGCATCAAAGTTACTGATGATATTTCAAAATGGGT ACCAATTGCAAAAACCTCATCTCCAACCAAAACTTTAAATAACAAAGATA TTGACTTGCCCAACAGCTTGGAGATTTCTTCAACAGACGACATCCAAACG acgaatgaaatttcaaaatgggcACAAGTTGACAAGACCTCATCTccaac aaaaacttcaaacattaAAGATACTGACgcaaatgaaaatttgaaaacct ctccaacaaaaaataccaaaaatactgatgacaattcaaaaCGTACACAA GTTGACGAGACCTCATCTCTAACCaaaactccaaacaaaaaagataatgg ctcaaacaaaaacttgaagatCTCTCCAACAGACAATCTCAAAAAGACTG ATGAGAATTCAAAATGGACACAAGTTGACGAGACCTCATCTCCAACAAAA AGCATTGACGCTTCGACTGAAACTCCAGAAGAATCTTTCTCGTCTTCTAA TACTGAGGGTGGTTTCATCGACTTATCTGATTTACTATGGGAATCAttaa aattctttgaagagaattATGAAAGTACAACTGAACAACCTAATGAGCTA AGTTCCACGCAAATGCCAACCACTgaagattttgaagatttctatACTTA TTCTAGGGGCACTAAGAAAGCTACTACAGATTCGATACCGTTTGAGACAA TACCAACAATTTTTGTAGATTCTCACTCTTCAACTAAGAATTCTAACGTC AAAACTAATCCAACTATTTTAACAGAAACCACTGACTTTACAGAGATTAA GACAACTTCAACTTCCAAAGATAAGACTCCATATTCAGTAAAACCTGAAA CAACCGGAAATAATATTGaaattgattctaaaaatcCTACTGATACAATC ACCGGAACGCCAGATCCAATGAAAACAAGAGAACATATAACAGGAAAAAC ACTTACAGGTTCCTCAAACAACCTATTGTTTGGTATTTCAACGGCAACTT TGTCACAATCACCAACTGAAACTCCAGAAGAATCTTTCTCATCTTCTAAC ACTAAAAATCACTTCATCGACTTATCCGATTTATTATGGGAATCATTAAA ATTCTACGAGGAGAATTATGGAAGTACAACTGAACTACCTAATGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000045_pilon | genome | sc0000045_pilon:1036332..1041857 + |
Properties
| Property Name | Value |
| Aaloc | 1861-3048:4339 |
| Aaloc | 628-1857:2983 |
| Aaloc | 520-624:2530 |
| Aaloc | 271-519:1780 |
| Aaloc | 1-267:1 |
|