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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000045_pilon:530472..536867+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006052 ID=XLOC_006052|Name=XLOC_006052|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6396bp|location=Sequence derived from alignment at sc0000045_pilon:530472..536867+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGTTGATCGTAGCatttattttgttcttgttgACGTTATTTTTGTA
CCTATTTCTATCATTGTATTCGAAGTATGCTGTTTTGTCTATACTATGGT
AATAATTTCctagttttcttccttttttattttaccaaGCTCGTAATATT
TCATGAGCTCATAATGTTCACATAGGCATTTCGCATACCATATTATATCA
TATGATATAGGGCTGCTTTTCCCGTTTGTAAACTATATAAAAAACTTTGT
GCAAAAGGGATAAAATCTTTAGATaaaaaaaCTTGGCTAGTTTGGCAGTA
GAAGCTGTTTAGAATATGGCTTAGATTAGATATTAGATCTTTCGGAACAT
CGCTAAATCAGCATCGACaaaaaaaCATTACACAAGAGAAAAGGTAGCAA
GAAATATTCcctgagattttgaaaaattacttttgaaaGTCTGAACATCA
ACTAATACTATACGCAACTCATCTTAAATTATACTTTTTGTGTTATTCAG
GCTTGTCAAGTTTCTTGGTGGATTCGAATCAAAAACGGTGAAACCATCAA
ACTCAAACCAAACTTTCTCCTACATGGAAAGAGGTCATAGATCGAAGGAT
CGCAATACAGTTGTTTTCATTCACGGCTTTACTGCAACAAAAGAATcttt
tgctgacgtcagtaaATATCTATCAACGAAATATCATATCGTCTCACTGG
ATTTGCCAGGGCATGGAATGACGTCAGGAGATACACCAGATGATGTTGGA
ATAGCGTATTTTGTGGAAGAagtgaaaaaagtaaaagctAGTGGTTGAAA
TCTTTAGTTTCCCTGTTTCGCTTTGTGACATGCATGGTTTAGGTCGATAC
ACTGAATATCAATGGGGAAACAAAATCTTGGCTAATTTAGGGTTGGAaat
tagagttttaactctgagttttaacatgagacttacgATTTAAGACGAGC
TTAGAATCTGAGGGTTCAAAAGCTTGTAAATGGTCCGactaggctgagaa
tatagccctGAAACCATAATACCCCTCAATACGGAACTTATTTCCTTGTT
TTGAAGAATTATCAGCTTTGTAAGAATTCGAAACAGCGAATTTACATCAT
TACTGGGCCCTAAGAAATATTACAACGTTCTACACTCCTGCAGAAATGAA
ATTTCATGGTTCTCCTTCGCACATAGAAGACGTttatcaaactttctttc
ctcgACAGTTTTTAGATGATATTGGTCTTGGTGATACAAAGATCCATTTA
ATTGGTGAATCAATGGGCGGACACATTGTTGGTTATTTTGCAGCTATGTA
TCCAAACAGTATTGCAAGTGTTACCATGGTTTGCCCACATGGTAAATAAG
TTGTGTTCCAAAGTCAAATCCAGTCCCTTAGCTCGCTTTTAGATTATTCT
AATAATACTCAACAACCTCAACAACTTCTAGACTGAAACGCCAGCCGGGC
TGAAACGGGATCTCACGGgtaaagtgagcgtaggagttaggtaaacatag
gaagaaattttgtcggcggcaagggctgaaagttaatcagcagcctctta
CCAACtcttgctcgttctcctacgcagctcttATTCTAGCAACCGCCCGc
tgcctttatgttcccgctctctgacatgattaattaacagactagttttc
TAGTCTAAACAGCTTCGTTCCCTGcattttatcagcttttttatgcttgc
TGATAGCGCTAGATTATACCCCGGGATTGTCTATTTTTCGAATGAAAGAG
ATTACTCGTATCAGCCAACatcagggtattctctggcatCAATCAGtagc
gtaaataaagcctggaatacacggggacgaggttgagcaCTCTCACAAAA
GGTGACGATTGTATGACGTTCATTggtaaaattagaaaaagtgaTGCAAT
AAGTGACTCgactctgggtacgagattggttGTGTTCTTTTTAAGAAAGC
CTGCATAGTAAAACGTATTGGgaatttcaatctttaaagtcaaaaatata
tgaaatatgATTAAAGCCTAAGCCAAAAGAGATCAGAAAGATGATCAaag
tagacgatcctatcgtctacacaagatcactaaaaaagggaagtttagga
gaggcgtgataaattcggctggagtaaacagtggcggagatgtttacagt
tgttccaaaactctaccgccactttttcccgtaaaccgccctgacgccct
aactctttctcgcGTTTACTGACCTCTAAACGGACGATATGATCAAAGTT
GTTGACTATCGTCCCATAGTGTTCCCTAGATTCCTCAATATGCCTAACCA
CCATCCAGCATACAAAAGAGCCTAAACCCggggggggTATGTGAAGAGTA
CATTGTATCGCcctaaaatgtgtttttttagAACCTGGAAGTCCCTGTAA
AGATCGGAGGAAATCAGAAATTTAGAATTCAATCCCATTAAGGAttggga
aaataggaaaattttaactttttaccccttgTGGTGtcgaaattttgtca
atttagTCCCAATAGGGGTAGTAAAATTCaccaaatttactttttttcct
tctttttagtcccgctaagggttctAGGGTACCCTACCTCCTCCCCCGAG
AGCTTGAACTACACTCATATCATGACTCTAAACTATGTTGAAATAACATC
TGTATCAGTTGGATGACCAAAATCtgtaaattttgaagttttctcACACa
gtcatatttttctttaaattttaccAGGAATTTATTTCAACGAACTAGAA
GAGCCAAAAGAAGAATTCTTACGAACAGGAAAACATTATTTGGTGCCTGA
AGATTATGCCGGTGTAAAAAATATGATGTTGTATTTGTCACATAAACAGA
TGTTTGTACCAGCATTTGTATTGAAAGGAATGTTAGAGCTTAGAATGGAA
CGAAACAACTTCTATAAGAAATGTAAGTACTAATAAACCAaattcgaacc
cagtccctgttttgtttttttggattttaggagCACTCGCAAATGTATCA
CGTCAATCAATAAAAGTAACTTAAGGGAAcctattttggcgggaactaat
tttgacgagcggcaaaaatcctgaaaatttttaattgtggcgagaactta
ttttggcagttgaagattttttgtgaactcaagaagttatttaggtaaaa
taacgaaaaatttaattttggcgtgaacttattttggcgagtgagcaaaa
tatttatttttggcgggaactaattttggcgaattttgcctaaattcgct
aaattcgccaaaaattagttcccgccaaaatatgTTCCCTTAagagctct
gaccatagtgaatttttaaaatttcccaCTTACAAAAcataaagttctac
ttgatgtagcacacaatactgtggcatgttatacattttctgttaggcca
attatccgtgaGTCTGAAGATTTAtaaatcgcaatgaaaaaatttgacga
agaagaaaatgaagacttttgcgaagaagagtatttcaactttgaagagc
ttagtttcggcgaagaaaaaacattttaaatttttttttgcggtagatgg
tgaatcttttatcgaactaaaacttttttttcgaaaattttttctaaaag
cttatttgcttcaaaatcttgaaaatagtgttttttgaCCAGTTTTCCAT
CCCAATCTTTCATAGAAAAatagccataacttttgatgcattaatttaga
aaaattttccgaaaaatttaaaacagttcaattctttgcagacagtttga
aataacttcgaaacaaaaacgttaattacccattaaaacttaacACTTTT
TATagaagaaggtgatgcaacatattattaacgtttCTTtgaagttcata
acgtcatttttgcaattaaattcttaattactcttaagggatttgattaa
aaagcaatttatagaGGCAattcgactatggtcagagcccttaaggtagT
ATGCAAGTGGCTCTGGTTGAGAGATTGGCACTAAACAGGAGAGATAGCTG
TAAAAATATCTTTTCCCACATCAGAACAAGACACTTGCCATTTAAACTCC
GCGAGCGTTGGCCAATGTGGACCCAATATATTCCCGTGTTTAACCTCTCG
AAGACCTTGTGTAAATTATTTGTATTCATTAAATGAATGAAACAAACACA
TTACCCAGCTGGCatacaatgttgtttcaacgtttatctagactagtaaa
ctagtcggttattacttatagccttataataaaactgtcaatcaaataat
gtaaacactaattaaatattcagcgcgcgtgagagaaaaggaaaataagc
gactagaagctacttccaacgccttttttttcttcacctaaaattgtaag
gagagacatacagatttctgtatgtctgacccgtgcgggattgcatttat
tttctttctgtttattgcgtttttagaaatgctcatttatttatatgttc
ccatgttcaatgttactatgaaatatcatttagtcaaaagagttggatgg
attctcaaaaacctaaaaaaagttgtaaaattaaacaacgttttttgagg
gaagtagcttctagtcgttgaaattcagaaaagagacgcaacttcacccc
ttcgattctttttatttagagcttgattttttgtatatgggtctgttttc
aacgactagtttactagtctaacgtttatctaacgtccacaacgtccata
taacgttagatgaacgttgaaacaacgtcgtgtgccagctgggtatagtc
aactctctctagttcgattctctattattcgaatctttctgcaattcgaa
ctaaaatatttaaCCCCTTAGCTGGAAAGTAGTTTAAATTTCTCTCTgta
ttttctctaattcgattaaAATTtctggtcccttgaagatcgaattagag
agatttgCATTTACCCTTGAAGTTGAATACGAAGGTCCTGTGAAACATTT
TGATTATAATGCCAGAGAAAAATTGTACACGCAACAATCTCAAGGTTTAG
GGTTTTTCACatttaagggctacttagacagTCTAAGTAGTAgtctacac
aatatattggtgagCAAAATATAGTTTTCGGGCCCTAATGTACggaggaa
ttttctttctgtaaacaatcccccccttatattgttggaatattgcaaat
cgagctgacaatatattgcagacaccttttcaatatatcgcCGGCATTca
gaaaaatatcatcaatatattgcttGAAAATATATCGTGCAGTGTATGCA
GCCCTTTAAAACTACTCCCATGGTTTATTATCACAGGCCATGTTTGAAAG
AAATTGAGCAGTATTCCATTTTTCTTAATAGTGTTGAATAACTTATTGCT
ACCACCAAATGATAGACTGCTTGAAAATTCAATGAAGCAAATTATCTCAC
CATCGATGTTAATGTGGGGAAAACTCGATAACGTACGAtttttttAGGCT
TTACTTTTCTTCTCAGAAATAATTACCTGAAAAAGCAATTTTGGCGGGAC
TTGATTTTGACGACACCCCATATCAGTTTTTAGCCGATATTATGAGACAG
GgtcattttaaattttcgacCCGCCAGCACTCCTCGAAATTCTTCGTTAC
TACGCTCCTTTAAAGCTATACTACATGACTTGGTAAAAACGGTAGGAAGC
ggtgggaaaatttttgttttggattTGCCTTATTAACTCATCTGAGTCAC
TGGGAACCTTTCTCTACTGGAATAGTCGGCCAAGATATCGTCCTCAGTAG
AAAATTATAATAATCTTTTGCATCGCTGAAaaaatcagataagcaaatcc
tcactgcagaATTGAGTGCTATTtattccatccccactgaattttctggc
taaaaatcaatggaataaaaagccataaaaaacatgggaatatcaattcc
cATCGAGATTTGGTCACCACTGGCTAGTaaaattccaccgggtctgtgag
aagggggtgtatttaaATTTAAAGGATTTATAAAGCAATTCAACAAAGTC
ACCAAAAATTATTCTCAACTAAATTCTTCattgagaaaattcaaaaaata
gcaGGTGTCGACTGGTTTACGAAACAACGCAATGGGGACGCGTCAGTTCT
TTGTTTGGTGTTTTGTGACCATATCTAGGACTTATTACTCGTTATAATAA
AAAACCGCAGTTGCATTTCCCCGTAAAATCTTTCTATCTAATTATCCCTC
TGATTTTTTACTCGGTATGATTTTCGATTGTATTTCAAACTCTTAGGTTC
TTGATGTATCTTGTGTTGATGTTATCAAGAAAAATGTTCCAAACTTGAAG
AAATGTGTTCTCCTTGAAAATACTGGTCATGTATTGACATACGAGACTCC
CAAAGAAGTTGCAACTAGTCTGGATCAACTTATAAAtagtttataa Coding sequence (CDS) from alignment at sc0000045_pilon:530472..536867+ >XLOC_006052 ID=XLOC_006052|Name=XLOC_006052|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1914bp|location=Sequence derived from alignment at sc0000045_pilon:530472..536867+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGTTGATCGTAGCatttattttgttcttgttgACGTTATTTTTGTA
CCTATTTCTATCATTGTATTCGAAGTATGCTGTTTTGTCTATACTATGAT
GTTGTTGATCGTAGCatttattttgttcttgttgACGTTATTTTTGTACC
TATTTCTATCATTGTATTCGAAGTATGCTGTTTTGTCTATACTATGGCTT
GTCAAGTTTCTTGGTGGATTCGAATCAAAAACGGTGAAACCATCAAACTC
AAACCAAACTTTCTCCTACATGGAAAGAGGTCATAGATCGAAGGATCGCA
ATACAGTTGTTTTCATTCACGGCTTTACTGCAACAAAAGAATcttttgct
gacgtcagtaaATATCTATCAACGAAATATCATATCGTCTCACTGGATTT
GCCAGGGCATGGAATGACGTCAGGAGATACACCAGATGATGTTGGAATAG
CGTATTTTGTGGAAGAagtgaaaaaaGCTTGTCAAGTTTCTTGGTGGATT
CGAATCAAAAACGGTGAAACCATCAAACTCAAACCAAACTTTCTCCTACA
TGGAAAGAGGTCATAGATCGAAGGATCGCAATACAGTTGTTTTCATTCAC
GGCTTTACTGCAACAAAAGAATcttttgctgacgtcagtaaATATCTATC
AACGAAATATCATATCGTCTCACTGGATTTGCCAGGGCATGGAATGACGT
CAGGAGATACACCAGATGATGTTGGAATAGCGTATTTTGTGGAAGAagtg
aaaaaaTTTTTAGATGATATTGGTCTTGGTGATACAAAGATCCATTTAAT
TGGTGAATCAATGGGCGGACACATTGTTGGTTATTTTGCAGCTATGTATC
CAAACAGTATTGCAAGTGTTACCATGGTTTGCCCACATGTTTTTAGATGA
TATTGGTCTTGGTGATACAAAGATCCATTTAATTGGTGAATCAATGGGCG
GACACATTGTTGGTTATTTTGCAGCTATGTATCCAAACAGTATTGCAAGT
GTTACCATGGTTTGCCCACATGGAATTTATTTCAACGAACTAGAAGAGCC
AAAAGAAGAATTCTTACGAACAGGAAAACATTATTTGGTGCCTGAAGATT
ATGCCGGTGTAAAAAATATGATGTTGTATTTGTCACATAAACAGATGTTT
GTACCAGCATTTGTATTGAAAGGAATGTTAGAGCTTAGAATGGAACGAAA
CAACTTCTATAAGAAATGAATTTATTTCAACGAACTAGAAGAGCCAAAAG
AAGAATTCTTACGAACAGGAAAACATTATTTGGTGCCTGAAGATTATGCC
GGTGTAAAAAATATGATGTTGTATTTGTCACATAAACAGATGTTTGTACC
AGCATTTGTATTGAAAGGAATGTTAGAGCTTAGAATGGAACGAAACAACT
TCTATAAGAAATTGTTGAATAACTTATTGCTACCACCAAATGATAGACTG
CTTGAAAATTCAATGAAGCAAATTATCTCACCATCGATGTTAATGTGGGG
AAAACTCGATAACTGTTGAATAACTTATTGCTACCACCAAATGATAGACT
GCTTGAAAATTCAATGAAGCAAATTATCTCACCATCGATGTTAATGTGGG
GAAAACTCGATAACGTTCTTGATGTATCTTGTGTTGATGTTATCAAGAAA
AATGTTCCAAACTTGAAGAAATGTGTTCTCCTTGAAAATACTGGTCATGT
ATTGACATACGAGACTCCCAAAGAAGTTGCAACTAGTCTGGATCAACTTA
TAAAtagtttataaGTTCTTGATGTATCTTGTGTTGATGTTATCAAGAAA
AATGTTCCAAACTTGAAGAAATGTGTTCTCCTTGAAAATACTGGTCATGT
ATTGACATACGAGACTCCCAAAGAAGTTGCAACTAGTCTGGATCAACTTA
TAAAtagtttataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000045_pilon | genome | sc0000045_pilon:530472..536867 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 808-957:6247 |
| Aaloc | 709-807:5334 |
| Aaloc | 514-705:2730 |
| Aaloc | 379-510:1209 |
| Aaloc | 100-378:502 |
| Aaloc | 1-96:1 |
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