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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000281_pilon:347135..349496- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006017 ID=XLOC_006017|Name=XLOC_006017|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2362bp|location=Sequence derived from alignment at sc0000281_pilon:347135..349496- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCGTTGGTATGACACCTCATCTCTAGATTCGAACGAATCTTTGCC
ATTAATTGGATCACCATCAACACCACAAGAGAACTGCCGTAAAAGCAGAA
TTCACACACAAGCCAATTATTGGGGCTGTGTTAAACACACACTTTCTTAT
ATTCTACGTTTTTTATTCTGGTCTGCTGGATTCAACCGTCACAAGAGCAT
CTTCACTAAAATATACAGTTGTACTATTCTATGCATTTGTTGGTATCAAG
TTGTTTACGAGATAGCTCGTAATTCTGGACATTTAAATTTTGTTGAGAAC
AAGAATACCTCTGATATAACAACAAATCAGAAGTTAGAAAATGCATCATT
TCTTACGTCAGCTTTTGGTACAGCATTTTCATATACTTTTATGTATATCT
GCTTAATGATTATGTATAAACCAAGCAGCAATTCAATCACTCCTTATGCT
GCATTGAGAGATATGGGAAATACAAAAGCTCGTATCATTCTGTTTACTTG
GTTGTTTTTCTCATGTATTTTTGTTGGATATATTTTGATTTATGTTTACA
TACATGGGTCAGAGATTAATCACCATTCAACATTGGTAAATTTAATCAAA
TATTTCAGCGAGACAACGGAGTATTTAGCACAATGGGTGGCAACAGTTTC
CATGTTTGCATTTTCCTGCTCAGCATTTGCAATCGGTAAGCTGTTAAGAG
ATCTTAAAGAATCATTTTTCAAGACTTTCATGCCTTCCCCTAACAAGTTT
CAACTTTTATTTAGCATTTCCTAACTCGGTATTTATTTCTCCAACTTGTC
TTTGCAGAATGCAGAATCTGAGTGATATATTTAATTAAGAAAAAGAAAGT
CTCTCTGCTATCAGGTTTTCTTGTGACCAACTCATTGAAAAGAAATCTAA
TCAAGCAAATTTGTCCCTCCAAGTGTTTACTCGCAATTTATAATTAGGCT
GAATTACTTTCATAATATTGATAATGCCATTAATTCATATCTTTTCTGTC
TACATTTTAAGGTACTTTTGCATCAGACACTTTTCGCAGAATCAAAAGTC
TCAATGGTGGATCAATCGACAGCGTTATAACAATACATAAAGAATTACGT
GCCATTGTCACTGAAACTACAAATGCTTTTTCCTTCTGGTTTCTATTACA
TTGGCTCCTCTACGGCATTACTGTAATCATAGGCTTTGTTGTGGTGGCTT
TACACAAATTGGGTCATTCTGAGACAGACAAGAAGATCTATTTTGGAACC
TTTTTTGCCATTAATGTTTTCTCCTTTGTTTATCCATGCATATGTGCAGC
TTACATAACAACAGCTTGTGCAGGTGAGTGTTATACACGTTTTTTTATAA
GAACATCCAAAATTTTTGGAGCTCTGGGATTCTTAACTTTTTGAGTTTTT
AAAAGTCTAAAAATGTCCTTAACATGTTTTTGTTTTAATCATTTTGTGAG
TATTTCTGTTCAGAAATTGGGTGTTTTAGATTCCACTGAGACTTAAAATG
TTCTTAACATGTTCTTATTTTCATCATTTTGTGAGTATTTCTGTGCAACT
TACTAAGAAATTGGGTGTTTTAGATTCCACTGAGCCTTAAAATGTTCTTA
ACTTGTTCTTAGCATTTTGGTCATCGATGCCTTATGTTCTTATATAGCTT
GTTCTTATAAAAGTCGATGTTAAAACCTTTAATGTCAGTCCTCTACAACG
ATTACCGCTCTACGTCAAAATTTATGGAAACTTTTTTTGGACCACCCGGT
ATAGTGAACTATTTGGCGCTAGATATTCTAGATGTTTATTGATAGTTATA
AAGCATAGTAACCAACACCTAAAAATCAGGGCGTGATCTCCCATGAATTT
AGAAATCATCTCAACCCAACCTAATTTGGAAATCTGGAGGTTGTTTGTCT
ATCCCCTTCCAGCTGAGATGTTGTGTAGCTCAGTCTTATACTGGAGCTGT
TAAAAAGCAGGCTCGGTGGAACAACTTTAAAAGTGAGGAGGCTGAAGGCT
CAAAATGAGATGAAATTTGCTAGAAATTTGAGAAAAAAATCTCATTTGCT
CAAAATTGGTGAGGTTGAAGTCTCCCCAATCTCCCCGCTTTCGCCGGGTC
GGAAAAGTGAAATTAGTTTTAGTTTCTTAAAATATTTTCTCCAAATTTTA
TTTCAGCCATTCCATCTCGAATCAACAACACCATCAGTGCTGACTGGCAT
GAAGGACATATTTTCAAAGAACGAAAAGAACTGCAGTTATTTGTTTCGTA
TTGTGCTGCATCTCCCGTATGTTTCAAAATTGGAAGAATCACTTTCACGT
CAACTTTAGCATGGTTCTCTTTCTTTTTTGGGAGTACTGGACTCTTGTTC
CATTTCTTTTGA Coding sequence (CDS) from alignment at sc0000281_pilon:347135..349496- >XLOC_006017 ID=XLOC_006017|Name=XLOC_006017|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2406bp|location=Sequence derived from alignment at sc0000281_pilon:347135..349496- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTCGTTGGTATGACACCTCATCTCTAGATTCGAACGAATCTTTGCC
ATTAATTGGATCACCATCAACACCACAAGAGAACTGCCGTAAAAGCAGAA
TTCACACACAAGCCAATTATTGGGGCTGTGTTAAACACACACTTTCTTAT
ATTCTACGTTTTTTATTCTGGTCTGCTGGATTCAACCGTCACAAGAGCAT
CTTCACTAAAATATACAGTTGTACTATTCTATGCATTTGTTGGTATCAAG
TTGTTTACGAGATAGCTCGTAATTCTGGACATTTAAATTTTGTTGAGAAC
AAGAATACCTCTGATATAACAACAAATCAGAAGTTAGAAAATGCATCATT
TCTTACGTCAGCTTTTGGTACAGCATTTTCATATACTTTTATGTATATCT
GCTTAATGATTATGTATAAACCAAGCAGCAATTCAATCACTCCTTATGCT
GCATTGAGAGATATGGGAAATACAAAAGCTCGTATCATTCTGTTTACTTG
GTTGTTTTTCTCATGTATTTTTGTTGGATATATTTTGATTTATGTTTACA
TACATGGGTCAGAGATTAATCACCATTCAACATTGGTAAATTTAATCAAA
TATTTCAGCGAGACAACGGAGTATTTAGCACAATGGGTGGCAACAGTTTC
CATGTTTGCATTTTCCTGCTCAGCATTTGCAATCGATGTCTCGTTGGTAT
GACACCTCATCTCTAGATTCGAACGAATCTTTGCCATTAATTGGATCACC
ATCAACACCACAAGAGAACTGCCGTAAAAGCAGAATTCACACACAAGCCA
ATTATTGGGGCTGTGTTAAACACACACTTTCTTATATTCTACGTTTTTTA
TTCTGGTCTGCTGGATTCAACCGTCACAAGAGCATCTTCACTAAAATATA
CAGTTGTACTATTCTATGCATTTGTTGGTATCAAGTTGTTTACGAGATAG
CTCGTAATTCTGGACATTTAAATTTTGTTGAGAACAAGAATACCTCTGAT
ATAACAACAAATCAGAAGTTAGAAAATGCATCATTTCTTACGTCAGCTTT
TGGTACAGCATTTTCATATACTTTTATGTATATCTGCTTAATGATTATGT
ATAAACCAAGCAGCAATTCAATCACTCCTTATGCTGCATTGAGAGATATG
GGAAATACAAAAGCTCGTATCATTCTGTTTACTTGGTTGTTTTTCTCATG
TATTTTTGTTGGATATATTTTGATTTATGTTTACATACATGGGTCAGAGA
TTAATCACCATTCAACATTGGTAAATTTAATCAAATATTTCAGCGAGACA
ACGGAGTATTTAGCACAATGGGTGGCAACAGTTTCCATGTTTGCATTTTC
CTGCTCAGCATTTGCAATCGGTACTTTTGCATCAGACACTTTTCGCAGAA
TCAAAAGTCTCAATGGTGGATCAATCGACAGCGTTATAACAATACATAAA
GAATTACGTGCCATTGTCACTGAAACTACAAATGCTTTTTCCTTCTGGTT
TCTATTACATTGGCTCCTCTACGGCATTACTGTAATCATAGGCTTTGTTG
TGGTGGCTTTACACAAATTGGGTCATTCTGAGACAGACAAGAAGATCTAT
TTTGGAACCTTTTTTGCCATTAATGTTTTCTCCTTTGTTTATCCATGCAT
ATGTGCAGCTTACATAACAACAGCTTGTGCAGGTACTTTTGCATCAGACA
CTTTTCGCAGAATCAAAAGTCTCAATGGTGGATCAATCGACAGCGTTATA
ACAATACATAAAGAATTACGTGCCATTGTCACTGAAACTACAAATGCTTT
TTCCTTCTGGTTTCTATTACATTGGCTCCTCTACGGCATTACTGTAATCA
TAGGCTTTGTTGTGGTGGCTTTACACAAATTGGGTCATTCTGAGACAGAC
AAGAAGATCTATTTTGGAACCTTTTTTGCCATTAATGTTTTCTCCTTTGT
TTATCCATGCATATGTGCAGCTTACATAACAACAGCTTGTGCAGCCATTC
CATCTCGAATCAACAACACCATCAGTGCTGACTGGCATGAAGGACATATT
TTCAAAGAACGAAAAGAACTGCAGTTATTTGTTTCGTATTGTGCTGCATC
TCCCGTATGTTTCAAAATTGGAAGAATCACTTTCACGTCAACTTTAGCAT
GGTTCTCTTTCTTTTTTGGGAGTACTGGACTCTTGTTCCATTTCTTTTGA
CCATTCCATCTCGAATCAACAACACCATCAGTGCTGACTGGCATGAAGGA
CATATTTTCAAAGAACGAAAAGAACTGCAGTTATTTGTTTCGTATTGTGC
TGCATCTCCCGTATGTTTCAAAATTGGAAGAATCACTTTCACGTCAACTT
TAGCATGGTTCTCTTTCTTTTTTGGGAGTACTGGACTCTTGTTCCATTTC
TTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000281_pilon | genome | sc0000281_pilon:347135..349496 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1000-1203:205 |
| Aaloc | 688-996:1350 |
| Aaloc | 1-684:2363 |
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