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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000281_pilon:259368..263109+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_006016 ID=XLOC_006016|Name=XLOC_006016|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3742bp|location=Sequence derived from alignment at sc0000281_pilon:259368..263109+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAATTGTACAAAAGTCTGAATCAATCATTGAGACGAAACCGTTTCGATA
CGGAGCAGGCCTAGCACCCACTCCACCGAACTTCCCTCGTGGTGCTCCAC
CAGTCTATATGAAAACTATCGAAGAAGCCATTGTCCACGCCCGAAAATTA
ACTTCTGGAGGAATTCTCCTGGTCGCTAAAAGTTTGTATGATGTCCCACT
GCGGTATATTCGTGATGAGGGAACTAAGCTTTACGGTGGAgtgaaatgtt
ttgtttttcctGTTGAAAAGATTCTGGATCCAATTCAAACTTTGAAGGAG
GGTAAAGTTTTGATTACGAATCCAGACTTTGTTTCCGGGTTTGAGTGGCC
TACTGTCATATTTTTATCTAACAACCGAAACATGGATTTTCCTTATCTTG
AGTATCATGATTGCAATATCGTCTTGAGATGTACCAACACCCTCATCATT
GTTGATGGAAAGGAAGTTGGTGCCGAATACGCAAAAGAGAAGgatgaatt
tttaaaagacGTCTCAAGAATCGACGAGGAGAAACTTGAGGTtgaaatcg
cgaaagttttacCTGAAATTAAATCTAAGATACGTGGTATTGTTAAAGAG
GACGTTGGTCGTTTTAAAGTAGGTCAACCGTATTTGTCTCGTATGTTAGA
AATGTTTGAGGAGAGAGCTAATCCAATAGTGATGAAACGAATCAAAGATA
TCTCAGTTAAATTGAATGGACATAGTGAAGAGAGTGTTGGCGACAATGAC
ACATCACTGAGCTTTGAGGAAGTGGGGGAAGTCTGTTTAAAAAATTCTGA
TGATAAGGATATATCAAACTTTGAAACAATGGCAGAAAATTTCACAAGCA
TTGTAGAGAAAGCTTCTAAAGATGTTGATGTTGAGAGTCGATCCCCTGGA
CTTATCACAGACACTCTTTTGCAGGCGTTGAATCCTGAAGTATTGCGATC
GTGCTTAAGTGCCCTTGgagtcaatcaaaaaaatcttcaatataTGCCTT
TAGATTTTACGATTGCGACTATGAATGAGGAAGGAGTAAAAAAGTCGTTT
CAAAGTTTGACTTCCGGTTTTTCGAGTAGGTCCTTTGACACTTCTAAACT
GCTTGATTTTTACGGGAGTTTTATACCCAACATGGTGAGAGCTGCTAAAA
AGTTGACAAATAAGAATGAAAAAGACCGCGAAGATGATGTCGACGGAGGG
TGGTACGGATCAAGAGGAGAGTAACATTGAACGAACTGTTCGTGAAACAG
ATGAGATTACAaccgaaaatgaagaaaagactGAAAAAGCTCTCGAAGAA
ATCGAGGATTTGGACTGAGTGCAAACCTCTTAAAgttaaattttataatt
ttagtattttaatCTTattgttcaaacttttttgagaaactgCTTTTCGG
ATAGGTTTTTAAAGGTCCTGATAAGCAAACATTTCCCAGTAACATTTTCC
TTCTGACGCAACAACCTTTAGTATCGACTGAATAAAGCTTTTATTTTTGT
GCTCCGAAAAATGAGAGAATCCTTTGTCCTTCCTTTAATCTCCTCGTGAA
TGGAAATTCGCAACTTCTTAGTTCTTCTGTATTAAATGTGCTGAAATGAA
TTGAGCCTCTGAGGCCTAATCAGGTCaatgtatattttattttttgtttt
tttaacatCAGTATATTTTCGTTTGTTGTACTCGGAATATTAGCaattta
ggcgagaccaatttaatttgttgttctacgggcagatcgttagcaaaata
tgggtcggtcggtcggtaaaataagaataaacttttaatttatcAGGATT
GGTAAAGTatcgaaaatgttttccaaaaaaatatctggatcaaaatttca
ctttttttatcttcgatgaagatcataataaaatcttaatgcttgatttt
caatttcttgaattaattttcagctttattcaaatttaattcttacaaat
aactagtgtgtaaaatgtattgtagtggaaattcattattatttttttga
ttttagcaaaaatagggtcggtcgggcccgtagaacaacaaatgaaattg
gtctcgccttacagATTATAATTTTCTTGGTAATCTGCAGTATTTTAATA
TTATATTACGTGCACCcttgttttttcataaataGTACATACtaatctat
atactaaaagtctaatgtgagtgagccgtgggggggccattatggatttt
tgagatgggggttcgagagttacgtgaccgatttttggttggatggttgg
ttggttgggtgggtggttgaaaacgaaagcgaaagtggtcaggggaagag
tgaaaattagcgtttttttaaagaagtcgttgcagtgtcaatttttcgca
aatttaaaaacccactttcccgtggaaataattgacgttttttagctttt
tgggacccttggggcataagctacccgttaaccgcaaaaatttcaaaatt
cgcgaattgaccgttgacaacattaggggtaaagggacccaatgacgtca
caGATCtgggaaaaacttgaaaatgcgatatctcgagtttgaataggagt
tgggaggtcggtgacccctcattggatcgagaattttatggagaataaga
tgggaggggttatgaggcttgagtgtgacttagaaatttggctgaatttt
caggtgttttcagttgatgacgtcatcaaaacctgaaaaatgcgatatct
cgagtttaaaaaggagttgggaggtcgttgaccccttattggatcggaaa
ttttaTGTGGAATTAGTTGGGGGGTAAGAGTgggtatatagaaactttcG
AAATTAAAAATATCCAGATTAAGGCTTTTtcggtccgatgacgtcattaa
aaacgGAAAATACAATATttcgagtttgagaaggatttatgcaatggttg
acccctcattggatcggaaatcagcAAGAGAATCTTTTGAGtcgatcaaa
aaataaattgaaaagttaattgcactttcgatgacgtcatttagggcCCA
AATAacgtcacaaaacattaaatatGCGATTTCTCGAGCTTCGATCAGTG
ataagtggtaatatttcgttctttgggcTTAGAATTTAACCTTATTACCC
Tccccccaccatccaaaggacttttgatgtgttcaacaacactctactcg
gcgggtgcgacgccgggtgacggctagtttAAACTAAAACATAAAGCCAA
TCAACAATGAAGTATAGCCGAAACCTTTCCCAGCcaataaaaagttttca
tttctcaCATTCGGCTATACTTTATTACTTAGACTTCATATTTAGACAAA
AGAGCTTCTTTTCTTATATGCGCATCTCACTGCTAGTTGTACCAATTCTt
tgtacagtatgtggcccccaaaacggcgatcaaatttgaaacttctctca
aatctaggtgtagaaagttttctataccccgttttcataacttattttca
atatccaaggagctagagtgagttatatgcaatttttatctaattttggt
gttaaaatatttcctttagacgcaaatatgttattttgcatccgtctcaa
accagcaaaaacatgctcatttttaagtataaccatcattctttcaaaat
aaacaaaaatcgtttaattctgataaatctacaagtcagaatcttcattt
taatgaaaacctccgttttgggggccgtctccgttttgggggccatatac
tgtattgTCATTTTCCGTTTTTATGATTGCAATGACGTCAAA Coding sequence (CDS) from alignment at sc0000281_pilon:259368..263109+ >XLOC_006016 ID=XLOC_006016|Name=XLOC_006016|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1368bp|location=Sequence derived from alignment at sc0000281_pilon:259368..263109+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAATTGTACAAAAGTCTGAATCAATCATTGAGACGAAACCGTTTCGATA
CGGAGCAGGCCTAGCACCCACTCCACCGAACTTCCCTCGTGGTGCTCCAC
CAGTCTATATGAAAACTATCGAAGAAGCCATTGTCCACGCCCGAAAATTA
ACTTCTGGAGGAATTCTCCTGGTCGCTAAAAGTTTGTATGATGTCCCACT
GCGGTATATTCGTGATGAGGGAACTAAGCTTTACGGTGGAgtgaaatgtt
ttgtttttcctGTTGAAAAGATTCTGGATCCAATTCAAACTTTGAAGGAG
GGTAAAGTTTTGATTACGAATCCAGACTTTGTTTCCGGGTTTGAGTGGCC
TACTGTCATATTTTTATCTAACAACCGAAACATGGATTTTCCTTATCTTG
AGTATCATGATTGCAATATCGTCTTGAGATGTACCAACACCCTCATCATT
GTTGATGGAAAGGAAGTTGGTGCCGAATACGCAAAAGAGAAGgatgaatt
tttaaaagacGTCTCAAGAATCGACGAGGAGAAACTTGAGGTtgaaatcg
cgaaagttttacCTGAAATTAAATCTAAGATACGTGGTATTGTTAAAGAG
GACGTTGGTCGTTTTAAAGTAGGTCAACCGTATTTGTCTCGTATGTTAGA
AATGAAATTGTACAAAAGTCTGAATCAATCATTGAGACGAAACCGTTTCG
ATACGGAGCAGGCCTAGCACCCACTCCACCGAACTTCCCTCGTGGTGCTC
CACCAGTCTATATGAAAACTATCGAAGAAGCCATTGTCCACGCCCGAAAA
TTAACTTCTGGAGGAATTCTCCTGGTCGCTAAAAGTTTGTATGATGTCCC
ACTGCGGTATATTCGTGATGAGGGAACTAAGCTTTACGGTGGAgtgaaat
gttttgtttttcctGTTGAAAAGATTCTGGATCCAATTCAAACTTTGAAG
GAGGGTAAAGTTTTGATTACGAATCCAGACTTTGTTTCCGGGTTTGAGTG
GCCTACTGTCATATTTTTATCTAACAACCGAAACATGGATTTTCCTTATC
TTGAGTATCATGATTGCAATATCGTCTTGAGATGTACCAACACCCTCATC
ATTGTTGATGGAAAGGAAGTTGGTGCCGAATACGCAAAAGAGAAGgatga
atttttaaaagacGTCTCAAGAATCGACGAGGAGAAACTTGAGGTtgaaa
tcgcgaaagttttacCTGAAATTAAATCTAAGATACGTGGTATTGTTAAA
GAGGACGTTGGTCGTTTTAAAGTAGGTCAACCGTATTTGTCTCGTATGTT
AGAAATTTTCCGTTTTTATGATTGCAATGACGTCAAATTTCCGTTTTTAT
GATTGCAATGACGTCAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000281_pilon | genome | sc0000281_pilon:259368..263109 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 655-684:3713 |
| Aaloc | 1-651:1 |
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