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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000393_pilon:225645..227979+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_005761 ID=XLOC_005761|Name=XLOC_005761|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2335bp|location=Sequence derived from alignment at sc0000393_pilon:225645..227979+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCAAACCATCCCAACGAAGGTTAGAGAAATacattcattttttc
aatcaaaagccTGATTCACACACATCTACCATCAATAATTGAACAAATGA
TTTATTTGAACCTAAGAGGATGTAACGATAAAGATACGGAGCTAATTACA
TAATGATACAATAATGAAAGTAAATATTTTATGAACCTTGTAATTCCAAA
CTACTTTTTAACTATTTAGATTGGATACCGTCAAGTCAACAATACCAAGA
AGAACCTACCCCACCACAGGAGGAAGAAGAACCACTTCCAAATCCACAGC
CAGGTTGGTGCATCATATTCTGAGCTCATTTAATTAAGTAAATCACTATT
TCAAGCAAGGGGTAAATCTCTTTTTCAACAATATGTGTAGAGGTCgaaag
attttaaagattttttagaattagttaggaattttcttaggttacaaaat
tttggggttttttagggattttttttgacattttttggaaagtgtacgag
gttttttcgagtgatttttACTCCTCGTTCAAATGTGTCAATTTAATGAT
CTGtttccttttattttatttcttcaatgattgtttgatttttttcttga
cagattttgttgactttgatttctttgATCTTGTGTGCTTGATGTTAGTT
CCTTGTATTTTTATCTCATTTGATTATCCTATTATTAATCCATACATAAG
CTAATGAGATTAACCCTCTGTTACAAACACtttctacattgaattcgttt
tcttgaattcattttttgactttttgactgtcattgattttgttgatttt
gtttttcttcctctgGACTAAATAACACTCAAAAATTCAGGATTATTTAA
GGTTTTAAATCTACACATTCTTTCTGATAACTAACATTTGGAAGACAAAA
TATGAATTTGAAATCTCAAATTTTCATGCCTCACATGTGCCTCTCATTGC
AAttctatatttttcaaacagaaagtaaaaattataaacataaaaCCTCT
AAATACTATTTCCACTTTAAAAAACAAAGAGCCAGTTAAATTTGCAGCCT
TAAGGActaaatatacgtttttttataagaataccttCTATAAGAATAAC
AGGaaaaaaaTTGGCCAATGGCCTTTTTTGGCCCTTTTGTTTGACTTAAA
TTTAAATGTGTGCTCAATCTGGCTAAACAAGAAACTCTAAAAggtatttt
tcatgtttttataaaGCTCAAGTCTGAaaagtaagaatatttcaccctca
attccagcaatttcttaaagaaatttcTTAATATCACTTAAACAACGATA
ACTTATGTTTTAGATTTACCAGGTGTCAAAATTGGCTACATACATGGAGT
GAAGAACTTGACAGAAAGCAACACCCCTGACAAACGTAATTTCTTTACAT
GTATGCTTCAAACAGAAGACTCAATGGTTCGCACAGTATGCTTCAGCCCA
ACAaagagaaaactttttacagAAGTTCAAAACTCCTGTGTACCAGTCAA
AATCAGCAAAACCACCAATGCATCGGGCTCAGGAGACATCTTTTTTCACC
GTGACTCAACGGTATCCCTCATGAAGTCTGTGCCATTTCCTTACCGAGGT
CATGATGTGAAAGGTGAAGAATTTGTATCTATCTCTGATCTCTCCCAGCT
TGCACCCTTTGAATTTGTCAATGTCAGAGCTCAAGCTTCAATTGTAGATG
ACCCAACTGAAACAATCGACTGGAACAACAATGAACCTCTGGCAAAGCAA
GAAATAACAATTACTGACAGCACTGGTTCCTGTACTGTGTTTCTGTATGG
TGATTATGTTGGAGCTTTAAAATGCGGTAAAAGCtatgaaattaaaaatc
tcAGGCTTCGCAAAAATGCCAATCACTTCTACCTCAATAGCTCTGTAAAA
GAGACTGTCACCTTCAAAGAGATTGACAATTTACAAGATCTAGCTGCTGT
GATGAAAGATGGTGATGTCACTCTTCAAGGTATAATTATTGGTATTTCCA
AAGTAAATGTgcaattcttttgtattttgtgCAACAAAAAGGCAACACTT
GTCAATGATAATACAGTTGAGTGTGTATCAAAATTGTGCCAATCAAAATA
TGGAAAAGTCAATGCCAAGTCGTCGATTACATTGACTGCGCCATTTAAAT
CTTTTAATGCGACTTACAAACTTTTCTTCAACAATGAAATGCTTAAAAAA
CTATCAGAAATTTTGCAATTTGACGTTGATGAAGAAAGCATCGCAAAAAC
ACTTTTCTCTGGCAATCTACCTGAAATCTTGGTCACGTTCAACAAATTTT
CCAACACAGTGAAGAATGTTGTTATGCCGGAATGA Coding sequence (CDS) from alignment at sc0000393_pilon:225645..227979+ >XLOC_005761 ID=XLOC_005761|Name=XLOC_005761|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2262bp|location=Sequence derived from alignment at sc0000393_pilon:225645..227979+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCAAACCATCCCAACGAAGATGGCATCAAACCATCCCAACGAAG
ATTGGATACCGTCAAGTCAACAATACCAAGAAGAACCTACCCCACCACAG
GAGGAAGAAGAACCACTTCCAAATCCACAGCCAGATTGGATACCGTCAAG
TCAACAATACCAAGAAGAACCTACCCCACCACAGGAGGAAGAAGAACCAC
TTCCAAATCCACAGCCAGATTTACCAGGTGTCAAAATTGGCTACATACAT
GGAGTGAAGAACTTGACAGAAAGCAACACCCCTGACAAACGTAATTTCTT
TACATGTATGCTTCAAACAGAAGACTCAATGGTTCGCACAGTATGCTTCA
GCCCAACAaagagaaaactttttacagAAGTTCAAAACTCCTGTGTACCA
GTCAAAATCAGCAAAACCACCAATGCATCGGGCTCAGGAGACATCTTTTT
TCACCGTGACTCAACGGTATCCCTCATGAAGTCTGTGCCATTTCCTTACC
GAGGTCATGATGTGAAAGGTGAAGAATTTGTATCTATCTCTGATCTCTCC
CAGCTTGCACCCTTTGAATTTGTCAATGTCAGAGCTCAAGCTTCAATTGT
AGATGACCCAACTGAAACAATCGACTGGAACAACAATGAACCTCTGGCAA
AGCAAGAAATAACAATTACTGACAGCACTGGTTCCTGTACTGTGTTTCTG
TATGGTGATTATGTTGGAGCTTTAAAATGCGGTAAAAGCtatgaaattaa
aaatctcAGGCTTCGCAAAAATGCCAATCACTTCTACCTCAATAGCTCTG
TAAAAGAGACTGTCACCTTCAAAGAGATTGACAATTTACAAGATCTAGCT
GCTGTGATGAAAGATGGTGATGTCACTCTTCAAGGTATAATTATTGGTAT
TTCCAAAGTAAATGTgcaattcttttgtattttgtgCAACAAAAAGGCAA
CACTTGTCAATGATAATACAGTTGAGTGTGTATCAAAATTGTGCCAATCA
AAATATGGAAAAGTCAATGCCAAGTCGTCGATTACATTGACTGCGCCATT
TAAATCTTTTAATGCGACTTACAAACTTTTCTTCAACAATGAAATGCTTA
AAAAACTATCAGAAATTTTGCAATTTGACGTTGATGAAGAAAGCATCGCA
AAAACACTTTTCTCTGGCAATCTACCTGAAATCTTGGTCACGTTCAACAA
ATTTTCCAACACAGTGAAGAATGTTGTTATGCCGGAATGAATTTACCAGG
TGTCAAAATTGGCTACATACATGGAGTGAAGAACTTGACAGAAAGCAACA
CCCCTGACAAACGTAATTTCTTTACATGTATGCTTCAAACAGAAGACTCA
ATGGTTCGCACAGTATGCTTCAGCCCAACAaagagaaaactttttacagA
AGTTCAAAACTCCTGTGTACCAGTCAAAATCAGCAAAACCACCAATGCAT
CGGGCTCAGGAGACATCTTTTTTCACCGTGACTCAACGGTATCCCTCATG
AAGTCTGTGCCATTTCCTTACCGAGGTCATGATGTGAAAGGTGAAGAATT
TGTATCTATCTCTGATCTCTCCCAGCTTGCACCCTTTGAATTTGTCAATG
TCAGAGCTCAAGCTTCAATTGTAGATGACCCAACTGAAACAATCGACTGG
AACAACAATGAACCTCTGGCAAAGCAAGAAATAACAATTACTGACAGCAC
TGGTTCCTGTACTGTGTTTCTGTATGGTGATTATGTTGGAGCTTTAAAAT
GCGGTAAAAGCtatgaaattaaaaatctcAGGCTTCGCAAAAATGCCAAT
CACTTCTACCTCAATAGCTCTGTAAAAGAGACTGTCACCTTCAAAGAGAT
TGACAATTTACAAGATCTAGCTGCTGTGATGAAAGATGGTGATGTCACTC
TTCAAGGTATAATTATTGGTATTTCCAAAGTAAATGTgcaattcttttgt
attttgtgCAACAAAAAGGCAACACTTGTCAATGATAATACAGTTGAGTG
TGTATCAAAATTGTGCCAATCAAAATATGGAAAAGTCAATGCCAAGTCGT
CGATTACATTGACTGCGCCATTTAAATCTTTTAATGCGACTTACAAACTT
TTCTTCAACAATGAAATGCTTAAAAAACTATCAGAAATTTTGCAATTTGA
CGTTGATGAAGAAAGCATCGCAAAAACACTTTTCTCTGGCAATCTACCTG
AAATCTTGGTCACGTTCAACAAATTTTCCAACACAGTGAAGAATGTTGTT
ATGCCGGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000393_pilon | genome | sc0000393_pilon:225645..227979 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 112-1131:1316 |
| Aaloc | 28-108:222 |
| Aaloc | 1-24:1 |
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