XLOC_005344.6 (mRNA) -

Overview
NameXLOC_005344.6
Unique NameXLOC_005344.6
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000265_pilon:18342..18815+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005344.6 ID=XLOC_005344.6|Name=XLOC_005344.6|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=474bp|location=Sequence derived from alignment at sc0000265_pilon:18342..18815+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATGTTGCAATGAGcagagtgaaaaatttaaatggtttgtaCTTTAC
TGGTCAATATCGACGTAGTGCTTTTGTCTGTAGTGATAAAGTTAGTGAAG
AATACACACGATTGCGTCAGAACAAAGTTGAAAGAGTTGCAGATATTATG
AGGTGCAGTTCTAATTTAAATGTTTGCCTATTGAATGTAAGATCTTTAAA
ACGACATGCAGTTGATATTCAAaaggacagatttttgtatgaaaatgatt
tgttatgTCTGACAGAGACACAGATGAGTTATGAGCATTCTGAGGAAGAC
AAACAAAGTATTCATGAAAAACTTCCTTATTATATTCTTAGTCATAATAT
TGACCAGCATAAATTCAACAGTGTTACTGTCTGTCATTCTCCTTCTTTTA
TTGACATTGATGAGTATGATCATTCATCATGCTTTTCtcttgtaaaattt
agaaaagctgaatttactgaaaag

Coding sequence (CDS) from alignment at sc0000265_pilon:18342..18815+

>XLOC_005344.6 ID=XLOC_005344.6|Name=XLOC_005344.6|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=948bp|location=Sequence derived from alignment at sc0000265_pilon:18342..18815+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATGTTGCAATGAGcagagtgaaaaatttaaatggtttgtaCTTTAC
TGGTCAATATCGACGTAGTGCTTTTGTCTGTAGTGATAAAGTTAGTGAAG
AATACACACGATTGCGTCAGAACAAAGTTGAAAGAGTTGCAGATATTATG
AGGTGCAGTTCTAATTTAAATGTTTGCCTATTGAATGTAAGATCTTTAAA
ACGACATGCAGTTGATATTCAAaaggacagatttttgtatgaaaatgatt
tgttatgTCTGACAGAGACACAGATGAGTTATGAGCATTCTGAGGAAGAC
AAACAAAGTATTCATGAAAAACTTCCTTATTATATTCTTAGTCATAATAT
TGACCAGCATAAATTCAACAGTGTTACTGTCTGTCATTCTCCTTCTTTTA
TTGACATTGATGAGTATGATCATTCATCATGCTTTTCtcttgtaaaattt
agaaaagctgaatttactgaaaagATGTATGTTGCAATGAGcagagtgaa
aaatttaaatggtttgtaCTTTACTGGTCAATATCGACGTAGTGCTTTTG
TCTGTAGTGATAAAGTTAGTGAAGAATACACACGATTGCGTCAGAACAAA
GTTGAAAGAGTTGCAGATATTATGAGGTGCAGTTCTAATTTAAATGTTTG
CCTATTGAATGTAAGATCTTTAAAACGACATGCAGTTGATATTCAAaagg
acagatttttgtatgaaaatgatttgttatgTCTGACAGAGACACAGATG
AGTTATGAGCATTCTGAGGAAGACAAACAAAGTATTCATGAAAAACTTCC
TTATTATATTCTTAGTCATAATATTGACCAGCATAAATTCAACAGTGTTA
CTGTCTGTCATTCTCCTTCTTTTATTGACATTGATGAGTATGATCATTCA
TCATGCTTTTCtcttgtaaaatttagaaaagctgaatttactgaaaag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_005344.6XLOC_005344.6-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000265_pilongenomesc0000265_pilon:18342..18815 +
Properties
Property NameValue
Aaloc1-474:1