XLOC_005340 (mRNA) -

Overview
NameXLOC_005340
Unique NameXLOC_005340
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000018_pilon:2473844..2474386+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005340 ID=XLOC_005340|Name=XLOC_005340|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=543bp|location=Sequence derived from alignment at sc0000018_pilon:2473844..2474386+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAATCTTCAGCATCTCACCAAATTGTTTGTATGCTTGGTTACTAT GACTACAATCACCGCATTGGCTATCCATGAAGATGCCACCAGAAATTCTC CACCCCCAACAGTGGCATGTCCAAACACATTATGTCAAAACAAACCAAAC GGAAACTACCAGCATCCTTCCAACAAAAACTATTTCATCCAATGCAGTAA TGGTGAACCTTATTGTCAAGTTTGCTGGCCATTGACTTTagaattcagtg aaaaatgtaACCAATGTCTTTATTCTGCCAATGATGAATGTGCTAAGACT CTCCCATTTGCAGATTCACCAATATCAACGAAAACCTCATCTGACTGCCC TGATCAGTGCAACATGAGAGGACCTGAATTCAGTGGCAACCTTGCCAATC CTTTCAATCCTCGAGGATATATCAGTTGTTGGTTAGGTGTCACTGTTGCA TGTCTACCTTGTCCAGggaaattagaatttaatgaacGTAAAAATCGATG TCTACATGGTGGATTTTATGAACAGGAACCAGTGAATTTATAG

Coding sequence (CDS) from alignment at sc0000018_pilon:2473844..2474386+

>XLOC_005340 ID=XLOC_005340|Name=XLOC_005340|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1086bp|location=Sequence derived from alignment at sc0000018_pilon:2473844..2474386+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAATCTTCAGCATCTCACCAAATTGTTTGTATGCTTGGTTACTAT
GACTACAATCACCGCATTGGCTATCCATGAAGATGCCACCAGAAATTCTC
CACCCCCAACAGTGGCATGTCCAAACACATTATGTCAAAACAAACCAAAC
GGAAACTACCAGCATCCTTCCAACAAAAACTATTTCATCCAATGCAGTAA
TGGTGAACCTTATTGTCAAGTTTGCTGGCCATTGACTTTagaattcagtg
aaaaatgtaACCAATGTCTTTATTCTGCCAATGATGAATGTGCTAAGACT
CTCCCATTTGCAGATTCACCAATATCAACGAAAACCTCATCTGACTGCCC
TGATCAGTGCAACATGAGAGGACCTGAATTCAGTGGCAACCTTGCCAATC
CTTTCAATCCTCGAGGATATATCAGTTGTTGGTTAGGTGTCACTGTTGCA
TGTCTACCTTGTCCAGggaaattagaatttaatgaacGTAAAAATCGATG
TCTACATGGTGGATTTTATGAACAGGAACCAGTGAATTTATAGATGGAGA
ATCTTCAGCATCTCACCAAATTGTTTGTATGCTTGGTTACTATGACTACA
ATCACCGCATTGGCTATCCATGAAGATGCCACCAGAAATTCTCCACCCCC
AACAGTGGCATGTCCAAACACATTATGTCAAAACAAACCAAACGGAAACT
ACCAGCATCCTTCCAACAAAAACTATTTCATCCAATGCAGTAATGGTGAA
CCTTATTGTCAAGTTTGCTGGCCATTGACTTTagaattcagtgaaaaatg
taACCAATGTCTTTATTCTGCCAATGATGAATGTGCTAAGACTCTCCCAT
TTGCAGATTCACCAATATCAACGAAAACCTCATCTGACTGCCCTGATCAG
TGCAACATGAGAGGACCTGAATTCAGTGGCAACCTTGCCAATCCTTTCAA
TCCTCGAGGATATATCAGTTGTTGGTTAGGTGTCACTGTTGCATGTCTAC
CTTGTCCAGggaaattagaatttaatgaacGTAAAAATCGATGTCTACAT
GGTGGATTTTATGAACAGGAACCAGTGAATTTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_005340XLOC_005340-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018_pilongenomesc0000018_pilon:2473844..2474386 +
Properties
Property NameValue
Aaloc1-543:1