XLOC_005281.4 (mRNA) -

Overview
NameXLOC_005281.4
Unique NameXLOC_005281.4
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000107_pilon:423024..424130-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005281.4 ID=XLOC_005281.4|Name=XLOC_005281.4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1107bp|location=Sequence derived from alignment at sc0000107_pilon:423024..424130- (Clytia hemisphaerica_ch_hm2_pilon)
GAATCAATCAAGATCGCCCATCAGCGTGCAGATGAATTTGAATATGTCAT
CGGTCATGGAGGCTTCCGTCTCAAAGGAGTCACTTTCACTGGCGAAGATC
CGCTACCAGACCTCACTGATGATGGTGAATCAATTATCGTTGGAGGATTG
AAATGGTATCCAAAGACAGATGAGGTATCACTTAACATTTCTGAACTGAA
CTTCTCCAAAAAGACAAGAGGCAAGAAGAATCAAGATCGATTGAATATCA
TTCCTGAAAAACTCACACGTCGTCAATGTATCTCAAAGGTTGCAGAGATC
TACGACCTCACTGGCAAGATTGCACCTCTTGTGGCTGCAATGAAGTTAGA
CCTCCAACAACTAAACCTACGACAACTTCAATGGGATGATGTCCTGCCCA
ACGAGCTGCGACAAGTATGGCTCAATCATTTTGAAACAATGCAAGAAATT
GGATCCATCCGCTTCAAACGATCAATCGTACCCAAGGATGCTGTCGATAT
GCAAATCGAAACTCTGGATTTTGGGGATGCAAGTCAAAGCTTGGTATGTG
TTAGTATCTATGCACGATTCCGTCTCAAAGATGGCTCTCATTCCTGTCAA
CTTGTCTTCTCACGCACAAGAACTGTTCAAAAGACATCATTACCAAGAGC
TGAGTTGTATGCTGCGTTATTGAATGCATACACAAGTGAAATCGTCAAAA
GATCATTCAAAGGACTTGTTGTATCATCCAAGAAGTTTACAGACAGTCAA
ATCGCATTACATTGGATCAGTAACGATCAAAAGCCATTGAAGGAATGGGT
CCGGAACCGTGTCATTGAAATCAATCGTTTTTCATCAAAGGACCAGTGGG
CCTACATTCAATCGAACGACAACATTGCTGATCTTGGTACAAGACCAGGA
GCTCAAATCAAGGATGTTGACCAATCTTCAAATTGGATCAATGGATTACC
ATGGATGCAGTTGCCATCATCTCAATTTCCAACACAATCTGCTGACCAGT
TGAAGCTAACAGCCCAGCAACAATCAGAAGTTCAAAAGGAGAAGTCATTC
CATTATGTCTCCTTCACATCCGAAAGCATTCTCAATGAAATGAAGAAACG
GTATGAA

Coding sequence (CDS) from alignment at sc0000107_pilon:423024..424130-

>XLOC_005281.4 ID=XLOC_005281.4|Name=XLOC_005281.4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=978bp|location=Sequence derived from alignment at sc0000107_pilon:423024..424130- (Clytia hemisphaerica_ch_hm2_pilon)
GAATCAATCAAGATCGCCCATCAGCGTGCAGATGAATTTGAATATGTCAT
CGGTCATGGAGGCTTCCGTCTCAAAGGAGTCACTTTCACTGGCGAAGATC
CGCTACCAGACCTCACTGATGATGGTGAATCAATTATCGTTGGAGGATTG
AAATGGTATCCAAAGACAGATGAGGTATCACTTAACATTTCTGAACTGAA
CTTCTCCAAAAAGACAAGAGGCAAGAAGAATCAAGATCGATTGAATATCA
TTCCTGAAAAACTCACACGTCGTCAATGTATCTCAAAGGTTGCAGAGATC
TACGACCTCACTGGCAAGATTGCACCTCTTGTGGCTGCAATGAAGTTAGA
CCTCCAACAACTAAACCTACGACAACTTCAATGGGATGAATCAATCAAGA
TCGCCCATCAGCGTGCAGATGAATTTGAATATGTCATCGGTCATGGAGGC
TTCCGTCTCAAAGGAGTCACTTTCACTGGCGAAGATCCGCTACCAGACCT
CACTGATGATGGTGAATCAATTATCGTTGGAGGATTGAAATGGTATCCAA
AGACAGATGAGGTATCACTTAACATTTCTGAACTGAACTTCTCCAAAAAG
ACAAGAGGCAAGAAGAATCAAGATCGATTGAATATCATTCCTGAAAAACT
CACACGTCGTCAATGTATCTCAAAGGTTGCAGAGATCTACGACCTCACTG
GCAAGATTGCACCTCTTGTGGCTGCAATGAAGTTAGACCTCCAACAACTA
AACCTACGACAACTTCAATGGGATCTAACAGCCCAGCAACAATCAGAAGT
TCAAAAGGAGAAGTCATTCCATTATGTCTCCTTCACATCCGAAAGCATTC
TCAATGAAATGAAGAAACGGTATGAACTAACAGCCCAGCAACAATCAGAA
GTTCAAAAGGAGAAGTCATTCCATTATGTCTCCTTCACATCCGAAAGCAT
TCTCAATGAAATGAAGAAACGGTATGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_005281.4XLOC_005281.4-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000107_pilongenomesc0000107_pilon:423024..424130 -
Properties
Property NameValue
Aaloc388-489:103
Aaloc1-387:1108