XLOC_005220 (mRNA) -

Overview
NameXLOC_005220
Unique NameXLOC_005220
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000098_pilon:1013306..1013977+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005220 ID=XLOC_005220|Name=XLOC_005220|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=672bp|location=Sequence derived from alignment at sc0000098_pilon:1013306..1013977+ (Clytia hemisphaerica_ch_hm2_pilon)
cACAAAACAAAGAGTTATGGAAAGATGCTGGCTTCGAGAAAGTCACTCAA ATGCAATTGGAATACAATTTCTTTTGCTGGAATGGAAACCAACTACACCA CTCTCCGCTGGTTGGCCATTTATCTCTTGAATTACCCTGAGTACCAAACT AAAATCCACCAAGAGATTCTCACCAAAATTGGCGCAAAACGTTCAATCAA ACCTGAAGATATCAATCTCTTGCCTTTTGTCCATGCCACAGTACTTGAAA CCAACCGATATGCCTCAGCAGCACCATTCGGCATCCCACATAAAGCTATA GTGGATACGTCCGTTGGTGGCCACCCCATCCCCAAGGGATCCaaagtttt tctcaatttctACAATTGTAATCACGATCCTACACACTGGGATGAACCAG AGAAGTTCAAACCAGAACGTTGGTTGAATGCTGATGGAATtgtaaacaaa gagaaaaaggcTACTCATTATCTACCCTTTGGTGCTGGTACTCGTGTTTG CATTGGTCAAAAATTAgcagaatttcaacttttttcatcaCTAACCAATC TTAtgcgaaattttgaaatttcactaCCTCTTGGAGAACCACTTCCTGGA ATGCAAGATGGAATATTAGGAATAACTTATGAACCAGCAACTAAGTATAA AGTTGTTTTATCACGTCGCTAA

Coding sequence (CDS) from alignment at sc0000098_pilon:1013306..1013977+

>XLOC_005220 ID=XLOC_005220|Name=XLOC_005220|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1344bp|location=Sequence derived from alignment at sc0000098_pilon:1013306..1013977+ (Clytia hemisphaerica_ch_hm2_pilon)
cACAAAACAAAGAGTTATGGAAAGATGCTGGCTTCGAGAAAGTCACTCAA
ATGCAATTGGAATACAATTTCTTTTGCTGGAATGGAAACCAACTACACCA
CTCTCCGCTGGTTGGCCATTTATCTCTTGAATTACCCTGAGTACCAAACT
AAAATCCACCAAGAGATTCTCACCAAAATTGGCGCAAAACGTTCAATCAA
ACCTGAAGATATCAATCTCTTGCCTTTTGTCCATGCCACAGTACTTGAAA
CCAACCGATATGCCTCAGCAGCACCATTCGGCATCCCACATAAAGCTATA
GTGGATACGTCCGTTGGTGGCCACCCCATCCCCAAGGGATCCaaagtttt
tctcaatttctACAATTGTAATCACGATCCTACACACTGGGATGAACCAG
AGAAGTTCAAACCAGAACGTTGGTTGAATGCTGATGGAATtgtaaacaaa
gagaaaaaggcTACTCATTATCTACCCTTTGGTGCTGGTACTCGTGTTTG
CATTGGTCAAAAATTAgcagaatttcaacttttttcatcaCTAACCAATC
TTAtgcgaaattttgaaatttcactaCCTCTTGGAGAACCACTTCCTGGA
ATGCAAGATGGAATATTAGGAATAACTTATGAACCAGCAACTAAGTATAA
AGTTGTTTTATCACGTCGCTAAcACAAAACAAAGAGTTATGGAAAGATGC
TGGCTTCGAGAAAGTCACTCAAATGCAATTGGAATACAATTTCTTTTGCT
GGAATGGAAACCAACTACACCACTCTCCGCTGGTTGGCCATTTATCTCTT
GAATTACCCTGAGTACCAAACTAAAATCCACCAAGAGATTCTCACCAAAA
TTGGCGCAAAACGTTCAATCAAACCTGAAGATATCAATCTCTTGCCTTTT
GTCCATGCCACAGTACTTGAAACCAACCGATATGCCTCAGCAGCACCATT
CGGCATCCCACATAAAGCTATAGTGGATACGTCCGTTGGTGGCCACCCCA
TCCCCAAGGGATCCaaagtttttctcaatttctACAATTGTAATCACGAT
CCTACACACTGGGATGAACCAGAGAAGTTCAAACCAGAACGTTGGTTGAA
TGCTGATGGAATtgtaaacaaagagaaaaaggcTACTCATTATCTACCCT
TTGGTGCTGGTACTCGTGTTTGCATTGGTCAAAAATTAgcagaatttcaa
cttttttcatcaCTAACCAATCTTAtgcgaaattttgaaatttcactaCC
TCTTGGAGAACCACTTCCTGGAATGCAAGATGGAATATTAGGAATAACTT
ATGAACCAGCAACTAAGTATAAAGTTGTTTTATCACGTCGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_005220XLOC_005220-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098_pilongenomesc0000098_pilon:1013306..1013977 +
Properties
Property NameValue
Aaloc1-672:1