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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:978394..980364+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_005215 ID=XLOC_005215|Name=XLOC_005215|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1971bp|location=Sequence derived from alignment at sc0000098_pilon:978394..980364+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaaatgaagacatttttACTGATGTATTGAAGATTTTCGCCAACAGCAA
GCCCAATGCATTCTccagttcaatttttaaattagaAGATTGTAACGGTG
AATTTGCCAGACTTTCAAACAGGGTACCAGCAAATGTTTTTTCAAGTCAA
GCACAAGTGCAGACAGAAAGTATACCAAAGGCATTGGAGAAGTACTTTGT
TACGGGAAAGGCATTGATTGAAACAGAGACCATCatgaaaaatttggatt
tgatCATGAAAGTTGCTGATAACCCATTGAATTTGCTGCTGGAAGGTGAA
ACCGGCATTGGAAAGACCGCCGTCATCAGTGAAGCTGCCAGGAGATTGGG
CGTTCCATTGATTCGGTTGAATCTGTCTTCGTCTACGTCAATCATGTCTT
TATTCGGTTCTGCTTTCCCAACAAAAGTGGAAGGGAAAATGCGCGTGGAG
TTCAAAGAAGGACCATTCACTTTAGCTTTCAAATTGGGAGCTTGGCTACT
TTTAGACGAATTCAATTTGGCTCCAGACAACGTTCTATCGTCAATTGAGA
GTGCACTAGATACTTCGATATTAATTTTATCAACAGACTCTATTGAAGGC
AGCGAGCATGCAGAAAAGAAGTACCTGGAAATCCAAAAGCATGACAACTT
TCGTTTATTTTGTACACAGAACCCAAGCACAGGTTTATTTAAAGGGAAAC
GAGAAGTCCATTCATCTTCCCTTTTATCGAGATTCACACCAGTTGTTATA
AATGCACCCAAGAAAAACGAGATAAAAGAGATTGTGCTACGGATCTTAAA
CGCCAACTGCAGCTTCCAGATTGATCATAGTAAGATGGCAGCAAATATTA
CAGATCTTCATACCGAAATATCAagtattttgacaaaaatagaTGAATCA
CAGAACGCGTATACCAAAGTTACGTTGAGAGATGCTATCGACTTTACCAA
CAAAGCTTCGTATATTTTGGGATTGAAAGGTGGTAGATATTCTAAATCAA
TGTCAATGATCGGAAAAGCTGCATATTCTGTCTACGCATCACGTTTACGA
AAGGTGGAAAACCAAGAGACAATCAAAAATGCAATCCAAAGGATACTTCA
GATTCAAATCGACATGAAAAATTATAACCTGATCAGTGGAACAGAACTTA
AAGGTTATATCTCAAGCCAGAATATGAAACCTAGCTTTTATCTAGAGGAT
AAAAGAAATTCGGTTGCTTTTAGCAATCAATTATATCAAAGTATTTTAGA
AGAGTTAATACCAAAGCATTTAAACGAAAAAGAGGTACTAAATATTGGAT
ACGATTTATACCAATGGACGATAAGCACAATGTTGTCAAACCttgatttg
aatgaaaaattggaagccattctcaaaaaatatcaaagccTTGTCAATTC
CAATAGCGAGAAGACTCTTATCAAAGATGTTATTGGTCAATCGATGGCGG
GCAATTTTCAAATTCCCGATGTTAAGTCTGAAGTGGGCAGCTTTCAAGGG
ACCAAAGCAATCACTGAGGAAATGCAAGAATGTTGGAAAGAGATGATCGA
TGCAGTGCACTTCAAGCAACCTGTTCTCTTGACTGGTGATAGCGGTTGTG
GAAAATCAACGACCATCGATGTGCTGGCAAGACTTTGTGGCAAGAAAGTT
ATACATCTCTACGTTACACCAGAAACTGAATCAGAGGCTTTGGTTGGCCA
AAATGAACCAGACAAAGAAAAGGTCGTCGCTTGGTCTGATGGTATTGTTA
CTAAAGCTTACAAAGAGGGATATTGGCTTGTTATCGAGAACATATCTGAA
GCACAGAGTACTGTTTTGGAAAGGTTGAATTCTGTTCTTGAAACTCCACC
GCAATGGTTAACCACAGAAAATGTTGGACTAAAAGAGGAAGAAGTCAATC
AAAACCCGGCTGACGACTTTCGAGTATTCGCAACGATGACACCTCCACGA
AGTAAACTATCTGAGCATCTT Coding sequence (CDS) from alignment at sc0000098_pilon:978394..980364+ >XLOC_005215 ID=XLOC_005215|Name=XLOC_005215|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3942bp|location=Sequence derived from alignment at sc0000098_pilon:978394..980364+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaaatgaagacatttttACTGATGTATTGAAGATTTTCGCCAACAGCAA
GCCCAATGCATTCTccagttcaatttttaaattagaAGATTGTAACGGTG
AATTTGCCAGACTTTCAAACAGGGTACCAGCAAATGTTTTTTCAAGTCAA
GCACAAGTGCAGACAGAAAGTATACCAAAGGCATTGGAGAAGTACTTTGT
TACGGGAAAGGCATTGATTGAAACAGAGACCATCatgaaaaatttggatt
tgatCATGAAAGTTGCTGATAACCCATTGAATTTGCTGCTGGAAGGTGAA
ACCGGCATTGGAAAGACCGCCGTCATCAGTGAAGCTGCCAGGAGATTGGG
CGTTCCATTGATTCGGTTGAATCTGTCTTCGTCTACGTCAATCATGTCTT
TATTCGGTTCTGCTTTCCCAACAAAAGTGGAAGGGAAAATGCGCGTGGAG
TTCAAAGAAGGACCATTCACTTTAGCTTTCAAATTGGGAGCTTGGCTACT
TTTAGACGAATTCAATTTGGCTCCAGACAACGTTCTATCGTCAATTGAGA
GTGCACTAGATACTTCGATATTAATTTTATCAACAGACTCTATTGAAGGC
AGCGAGCATGCAGAAAAGAAGTACCTGGAAATCCAAAAGCATGACAACTT
TCGTTTATTTTGTACACAGAACCCAAGCACAGGTTTATTTAAAGGGAAAC
GAGAAGTCCATTCATCTTCCCTTTTATCGAGATTCACACCAGTTGTTATA
AATGCACCCAAGAAAAACGAGATAAAAGAGATTGTGCTACGGATCTTAAA
CGCCAACTGCAGCTTCCAGATTGATCATAGTAAGATGGCAGCAAATATTA
CAGATCTTCATACCGAAATATCAagtattttgacaaaaatagaTGAATCA
CAGAACGCGTATACCAAAGTTACGTTGAGAGATGCTATCGACTTTACCAA
CAAAGCTTCGTATATTTTGGGATTGAAAGGTGGTAGATATTCTAAATCAA
TGTCAATGATCGGAAAAGCTGCATATTCTGTCTACGCATCACGTTTACGA
AAGGTGGAAAACCAAGAGACAATCAAAAATGCAATCCAAAGGATACTTCA
GATTCAAATCGACATGAAAAATTATAACCTGATCAGTGGAACAGAACTTA
AAGGTTATATCTCAAGCCAGAATATGAAACCTAGCTTTTATCTAGAGGAT
AAAAGAAATTCGGTTGCTTTTAGCAATCAATTATATCAAAGTATTTTAGA
AGAGTTAATACCAAAGCATTTAAACGAAAAAGAGGTACTAAATATTGGAT
ACGATTTATACCAATGGACGATAAGCACAATGTTGTCAAACCttgatttg
aatgaaaaattggaagccattctcaaaaaatatcaaagccTTGTCAATTC
CAATAGCGAGAAGACTCTTATCAAAGATGTTATTGGTCAATCGATGGCGG
GCAATTTTCAAATTCCCGATGTTAAGTCTGAAGTGGGCAGCTTTCAAGGG
ACCAAAGCAATCACTGAGGAAATGCAAGAATGTTGGAAAGAGATGATCGA
TGCAGTGCACTTCAAGCAACCTGTTCTCTTGACTGGTGATAGCGGTTGTG
GAAAATCAACGACCATCGATGTGCTGGCAAGACTTTGTGGCAAGAAAGTT
ATACATCTCTACGTTACACCAGAAACTGAATCAGAGGCTTTGGTTGGCCA
AAATGAACCAGACAAAGAAAAGGTCGTCGCTTGGTCTGATGGTATTGTTA
CTAAAGCTTACAAAGAGGGATATTGGCTTGTTATCGAGAACATATCTGAA
GCACAGAGTACTGTTTTGGAAAGGTTGAATTCTGTTCTTGAAACTCCACC
GCAATGGTTAACCACAGAAAATGTTGGACTAAAAGAGGAAGAAGTCAATC
AAAACCCGGCTGACGACTTTCGAGTATTCGCAACGATGACACCTCCACGA
AGTAAACTATCTGAGCATCTTaaaaatgaagacatttttACTGATGTATT
GAAGATTTTCGCCAACAGCAAGCCCAATGCATTCTccagttcaattttta
aattagaAGATTGTAACGGTGAATTTGCCAGACTTTCAAACAGGGTACCA
GCAAATGTTTTTTCAAGTCAAGCACAAGTGCAGACAGAAAGTATACCAAA
GGCATTGGAGAAGTACTTTGTTACGGGAAAGGCATTGATTGAAACAGAGA
CCATCatgaaaaatttggatttgatCATGAAAGTTGCTGATAACCCATTG
AATTTGCTGCTGGAAGGTGAAACCGGCATTGGAAAGACCGCCGTCATCAG
TGAAGCTGCCAGGAGATTGGGCGTTCCATTGATTCGGTTGAATCTGTCTT
CGTCTACGTCAATCATGTCTTTATTCGGTTCTGCTTTCCCAACAAAAGTG
GAAGGGAAAATGCGCGTGGAGTTCAAAGAAGGACCATTCACTTTAGCTTT
CAAATTGGGAGCTTGGCTACTTTTAGACGAATTCAATTTGGCTCCAGACA
ACGTTCTATCGTCAATTGAGAGTGCACTAGATACTTCGATATTAATTTTA
TCAACAGACTCTATTGAAGGCAGCGAGCATGCAGAAAAGAAGTACCTGGA
AATCCAAAAGCATGACAACTTTCGTTTATTTTGTACACAGAACCCAAGCA
CAGGTTTATTTAAAGGGAAACGAGAAGTCCATTCATCTTCCCTTTTATCG
AGATTCACACCAGTTGTTATAAATGCACCCAAGAAAAACGAGATAAAAGA
GATTGTGCTACGGATCTTAAACGCCAACTGCAGCTTCCAGATTGATCATA
GTAAGATGGCAGCAAATATTACAGATCTTCATACCGAAATATCAagtatt
ttgacaaaaatagaTGAATCACAGAACGCGTATACCAAAGTTACGTTGAG
AGATGCTATCGACTTTACCAACAAAGCTTCGTATATTTTGGGATTGAAAG
GTGGTAGATATTCTAAATCAATGTCAATGATCGGAAAAGCTGCATATTCT
GTCTACGCATCACGTTTACGAAAGGTGGAAAACCAAGAGACAATCAAAAA
TGCAATCCAAAGGATACTTCAGATTCAAATCGACATGAAAAATTATAACC
TGATCAGTGGAACAGAACTTAAAGGTTATATCTCAAGCCAGAATATGAAA
CCTAGCTTTTATCTAGAGGATAAAAGAAATTCGGTTGCTTTTAGCAATCA
ATTATATCAAAGTATTTTAGAAGAGTTAATACCAAAGCATTTAAACGAAA
AAGAGGTACTAAATATTGGATACGATTTATACCAATGGACGATAAGCACA
ATGTTGTCAAACCttgatttgaatgaaaaattggaagccattctcaaaaa
atatcaaagccTTGTCAATTCCAATAGCGAGAAGACTCTTATCAAAGATG
TTATTGGTCAATCGATGGCGGGCAATTTTCAAATTCCCGATGTTAAGTCT
GAAGTGGGCAGCTTTCAAGGGACCAAAGCAATCACTGAGGAAATGCAAGA
ATGTTGGAAAGAGATGATCGATGCAGTGCACTTCAAGCAACCTGTTCTCT
TGACTGGTGATAGCGGTTGTGGAAAATCAACGACCATCGATGTGCTGGCA
AGACTTTGTGGCAAGAAAGTTATACATCTCTACGTTACACCAGAAACTGA
ATCAGAGGCTTTGGTTGGCCAAAATGAACCAGACAAAGAAAAGGTCGTCG
CTTGGTCTGATGGTATTGTTACTAAAGCTTACAAAGAGGGATATTGGCTT
GTTATCGAGAACATATCTGAAGCACAGAGTACTGTTTTGGAAAGGTTGAA
TTCTGTTCTTGAAACTCCACCGCAATGGTTAACCACAGAAAATGTTGGAC
TAAAAGAGGAAGAAGTCAATCAAAACCCGGCTGACGACTTTCGAGTATTC
GCAACGATGACACCTCCACGAAGTAAACTATCTGAGCATCTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:978394..980364 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1971:1 |
|
