XLOC_005195 (mRNA) -

Overview
NameXLOC_005195
Unique NameXLOC_005195
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000098_pilon:1062367..1063681-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005195 ID=XLOC_005195|Name=XLOC_005195|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1315bp|location=Sequence derived from alignment at sc0000098_pilon:1062367..1063681- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCACGTTTGTTAGCTATGGTTCATAAAAAACGTCACACGCCATTACC TGCTCTTATATTCACTGTAAGTTGTTACTGATCATTTTAAAAACATTTGT TGTTGGTGTTTTCTATGAGAATTGGTTATCGTTTTGTTAGAGAGAGTCAA CTCTAGGTAGGTTCGACAAAAAAGGACTCCATGATAATTATTCTCGGGTA CCTCAACCTCTCCTCCACTAAACCCCTCCTAAGTAGTGTCTTGAAGATTT AACAGCCAGAAAGTCTCTCATTTAAAATCCAAGGTATTAATTTTTGAGAA TAATAAAAAAATTGAATTCTAATTTCTCCTTTTAGTGCGTGATAGCATGG ATTATGCTGATTCCAGAATCTTCCAACTTCAGCACTCTAGTCAATTATTT CAATTTTGCTGCGTGGACATTTTATGGTGCTACCGTTGCAGCGTTGCTAT GGTTACGTTATAAAGAACCAGATCTGGAACGTCCTTACAGGGTAAATTGA ATTTTTGATTATGTTTTCATCCGATCTTCATCTCGACTGATGCTGTTTGT ACAAAATCATTTTTTCCCAAGGTGTAAAATATATATACTTTATTTTTCAT GTCAGGTTTTCATCGGAGTTCCCATCTTGGTTTTGTTATGTTCAGTCTAT TTGGTGGTGGCACCTTTTTATGATTATCCCTTGGAATCATTTTACTGTTT GTTGTTTATATTGCTCGGTATTCCTGTCTACTTCATCTTCGTTCATTTCA AATTATTCCCCAACAAAGTCTACGATGGATTCGGTAAGTTTCCATATTTG ATTTCGATATTTCAAATTATAGTTTATACTTGCTTGCTGATTTGAGTTCG AATGGGGAAACCAATTTATTCGAATTATAAGGTGCTTCTCGAGATCATAA TATAGGTAAGCTGAAAATAATATTTCACTGATCTGGATGATTTGCTCTTG AGAAAGACTCTAACGTGGTCCTAAAATTCGCATGTAAAAGAAAAAAGTAG ATTTTTCATGGCTTGAACATCCTTTTTTATCATGGTCCCCCAAAACAAAA ATCCTCGAACAACTACATTTGTATTTTGTGAACGATTAATTTTTATGTAG ATAATAGGAAGAAAGAAAACTGCATTTTAACTTACTTCCTTTTCAAATCA CCAACTTTATATTTACCAGATGCAATGACAGACTTTATAGAGAGGAAGTG CAATCTATCAATGCCAGGAGTTGACCAGAAAGATGAAGTGGATGAGATTG ACAAACAAAAGAAAGAACAACAACTAGCAATGCAACCTCTCAAAACTTCC ACTGATCAAATCTAA

Coding sequence (CDS) from alignment at sc0000098_pilon:1062367..1063681-

>XLOC_005195 ID=XLOC_005195|Name=XLOC_005195|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1092bp|location=Sequence derived from alignment at sc0000098_pilon:1062367..1063681- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCACGTTTGTTAGCTATGGTTCATAAAAAACGTCACACGCCATTACC
TGCTCTTATATTCACTATGCCACGTTTGTTAGCTATGGTTCATAAAAAAC
GTCACACGCCATTACCTGCTCTTATATTCACTTGCGTGATAGCATGGATT
ATGCTGATTCCAGAATCTTCCAACTTCAGCACTCTAGTCAATTATTTCAA
TTTTGCTGCGTGGACATTTTATGGTGCTACCGTTGCAGCGTTGCTATGGT
TACGTTATAAAGAACCAGATCTGGAACGTCCTTACAGGTGCGTGATAGCA
TGGATTATGCTGATTCCAGAATCTTCCAACTTCAGCACTCTAGTCAATTA
TTTCAATTTTGCTGCGTGGACATTTTATGGTGCTACCGTTGCAGCGTTGC
TATGGTTACGTTATAAAGAACCAGATCTGGAACGTCCTTACAGGGTTTTC
ATCGGAGTTCCCATCTTGGTTTTGTTATGTTCAGTCTATTTGGTGGTGGC
ACCTTTTTATGATTATCCCTTGGAATCATTTTACTGTTTGTTGTTTATAT
TGCTCGGTATTCCTGTCTACTTCATCTTCGTTCATTTCAAATTATTCCCC
AACAAAGTCTACGATGGATTCGGTTTTCATCGGAGTTCCCATCTTGGTTT
TGTTATGTTCAGTCTATTTGGTGGTGGCACCTTTTTATGATTATCCCTTG
GAATCATTTTACTGTTTGTTGTTTATATTGCTCGGTATTCCTGTCTACTT
CATCTTCGTTCATTTCAAATTATTCCCCAACAAAGTCTACGATGGATTCG
ATGCAATGACAGACTTTATAGAGAGGAAGTGCAATCTATCAATGCCAGGA
GTTGACCAGAAAGATGAAGTGGATGAGATTGACAAACAAAAGAAAGAACA
ACAACTAGCAATGCAACCTCTCAAAACTTCCACTGATCAAATCTAAATGC
AATGACAGACTTTATAGAGAGGAAGTGCAATCTATCAATGCCAGGAGTTG
ACCAGAAAGATGAAGTGGATGAGATTGACAAACAAAAGAAAGAACAACAA
CTAGCAATGCAACCTCTCAAAACTTCCACTGATCAAATCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_005195XLOC_005195-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098_pilongenomesc0000098_pilon:1062367..1063681 -
Properties
Property NameValue
Aaloc403-546:145
Aaloc223-399:711
Aaloc67-222:981
Aaloc1-66:1316