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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:1085627..1091631+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_005173 ID=XLOC_005173|Name=XLOC_005173|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6005bp|location=Sequence derived from alignment at sc0000098_pilon:1085627..1091631+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaaaagataaagaaaaaatgagGATTATATTACAGATTTTGTTTTTGGT
TATACTGCTTTTTGAAACTGAAGCCAAATCAAAAAGCGAAGAATACCAAA
AACcaaaacatgatttttttacttcGGCGTCAGATATGGAAGTattgtta
aatgttgaaaagaaGTTGTCTAAGAAGTTTCTTAGATATGTTCGTAAAGA
AGAGGAGAGGCTTGATAAGTTGGAGGATGAGATACGAAACATTGAAGATG
GTTGGCCACAACCAGGTCGTAGTAAAGCTCAATGGTTATCACACGTCACT
AACTCGTACACTATTTTAAAGAGATTCTCAACCTTTTGGCCGAAAATTGG
TGATTTTTCAAAGTCTAATACAACCAAAGATCACATGCTGAGATTGTTTT
CTGATTTAAGTCGAATCAAAGAATCACTTCCCGCCGAGGAAGATATGAAA
GGAGCGTTGAATGCTGTCTTCAGGTTACAAGACACTTATGATTTACCTGC
AGCAGATTTTATTGATGGTTTGGGAGGAGACCGCGCGCATAAATTAAGCG
TTGAAGAGATTTTCGAGATTGGTTTTCTATGTGTAGGCATCAATGATCAT
TACCACGCACAGCAATGGTTAAACGAAGCTCTGAACCGCTTCCCGGTTGG
CATACAACAAGTTGGATTCTTAGATAGAATCTCCCTTTTAGGTGAGGAtt
tttttAATAGGCAATGGCATGGTCAAAActtgatgttttttataagaata
ttcatcatGATAAAGTTGGcctaaaaatttagaatatcACTATCATGGAG
TTTGGcaactgaagctaagaatgtccTTTTTAGAACATTTCTAACATGAA
ATTGTCATCTATCCCCCACTAAGGCTAAAAGGTTCATAAAGATGCTATTT
TATACTTTATAGGTACATGaatcaaaaagttaacaaaattttttgaattt
tcttacaAAACAAAACGTGTACTTTCTTATTATTTGTAAAAAGAATTGTT
CATCGATTGcaaatacttttttcttttataagaacaacgaggctcaaaat
cgctaaaaaataaaacaatttatgAACAATaatgagcctgaaattactca
atttcaagcaatatagggagtcaaagtagtaaaaattgggtataacgcct
aaaatacctcaattacaccctaAATCATTGTCATGAAATCAtattgaata
cacgtttttttttattagaacacctaaaatttggctgagcctggatgtgc
ttatttttttaagcaattttcagcctaaaatgtttcttaaatgcgttctt
aatttttcaaatcgacaatatcatgcaaaataaatagcacttaaaattag
taaaaatttggacaatatttgaccctcgattttagaaaatccatgcctga
gttcggttaaaactgcttgaaaagagtagtaaaattgtagtttcttgtca
tttttttccaaactgaggctgggcatgttcttacgatgttcttaattttt
cgacgaatttcagcctcaatgttcttataaactgggttctaataaaaaaa
aaacgtgtagtgctCGATGATAAACAAACAAGATACCAGAGCCAAGTAAA
ATTTAAAAGCGCCAAACTTTAAGTTATgtacttttattgaaagaaaactt
tttttcaattacACCCTAGAATAAGAGCAATTGAAGTGCCaaaaaaaCaa
gaattcttataaaaaagtgtactgTAAATTTTAGAGGTACGGCTTAAAAC
CTTGGCTACAAATATGTTATAAAAATTAcaagattttaagaaataatgga
ATACTGTACTACTATACAAAGAATTCATCTTtacaaaaagcgtgtatttt
gaaaagaaagatcACTCACTTATCAGAGAAACCTTTTTGTTGTTCTTGGT
GAAACTGATTTGATATCTTTCGCTCGAACCTGTTGGCCCTTCTTCTTGCC
CTAAAGAAAATGGTGAATACTTCCATTACTTTCAAAGTgttgaaaaacca
aaaaaatctacaacgaaaaagaaataaaatacacaaacaactttcgaaca
aataaagagaaaaagaaaaatgatgattttacaaaaatcaaaggAATTAT
ACAGAATGTGAGCTTGAAATTAAAGGCCCCCCTCCTCAatggcataccgg
ataagtgggatgggggaacctaagtgggaacctaaatgaacacctgaaaa
gtgggatgggggaacctaagtgggaacctaaatgaacaccggaaaagtgg
gatgggggaacctaagtgggaacctaaatgaacaccggaaaagtgggatg
ggggaacctgggaacctaaagtgggaacctaattttttattttttttatt
tttttttttatttttttttttatagcaatatatttcgcacgtCCATTGGC
ctcctatgaaacagaacttttgattttacattttataaagttttttctcc
ctttcttttatcaaacgctctttgaagacttgtaaggatggtgcttcaac
aatatcttcttctagatcattccaaggtttcacacttctgtaaaaaagag
agttgctttggtagcctctcataccgtcattagcaaagttcctttgaagc
tcgtaatcatgctgacgtcgtggtcgtgttcgaggagtaaatttctctga
tcttatagactcgtcataaatgtggaggttcttgaaaacttccaccatat
caccaacttgccgcctggtctttaggctaggtagattgatgagtcgtagc
cgatcttcgtatgagtagtttctatagcaactaactagccttgtagctct
tcgttggacgccctcgattgcattgatatgtttgattagccttggagacc
atactacatgtgcatattccaaatggggtctgacaaatgcaatgaaaagc
gttcgaaacatatctggtgagagaaattcgaagctcctgctaatcaagcc
aacgatagagttagctttcttgattttactgaatatatgggcttcaaagg
tcaggtcactatcgattatcactcctagatctttttcttggtcaacatgt
tctagaacagatcctgatagggatggacatatttgatgttccaaaattta
cccagtgttaaaacatgacacttgttcggatgaaattctaaaagctttga
ccaaattttaaacccttagagtgcacttattctcatttttgctcatttcc
acccttacagtgtactttgggaagcttggaaaaaagggccgcacgtacgg
taggtcgtttaccttgagtgtcccccccccgtggatctatgcttatgtgt
attgaaacgtggcaagccgtgtaatatgttctattttactatcaaacatt
tttaattaatgaagtgtattcacacgctgtactgtttggttggtacagaa
agaaaaacgagctagaatccgttaaatgctaagcgaccccagccctgacc
cgaaaattggagctgcgaataaaaaacaatgtgtattgcatcaagagtga
acaaaaactagatcgtaaataatgttttactagatactgtattcaagcaa
attagatccgcgcaaaagaaagaagaggctctaagttatccatcgagcta
tgaacgaacttctaattccttctagatttgaagatatgacggtttaaagt
ttaaagtttaaagtcaattaagtgaatttactaaaaagaacctttcagat
gcactataaaactgctgataaataaacatgcttttttgagctaattgaat
aaataaattccctttgttttattttcaacattattgtttgcgaaccgtaa
tgtaaagagtaaataactggtgttcttattatgataaaaggttttttcca
caggaaaaagtatggaaatcacatgcttggtaaaactgatttccgagcat
gtgatcctgcaaaaaatcacatgcgtgtgaaaatgcAATTCACAAGTCAT
CTTTTCTCAACTTAAATGGAGTGTCTGACTAGATATAAAATCACAAATAG
GATTGTTTGTCTTTCTTAGAGAGAGAGGTTTAATACCCTAAAAGTAACTC
ACTTCTATTCTATTTAACAAGTGAGAAAAGATGGATTGTGAATTacattt
tcacacgcatgtgattcacGGATATTTTCCTGTGTTCTTTccttgcatat
aatatctttcttatctttatgtatttgtttttaaagaaaaatatttcaat
tctattaataattaaacaacttaggttcccacttaggttcccccatccca
cttttccggtgttcatttaggttcccacttaggttcccccatcccacttt
tccggtgttcatttaggttcccacttaggttcccccatcccacttttccg
gtgttcatttaggttcccacttaggttcccccatcccacttttccggtgt
tcatttaagttcccacttaggttcccccatcccacttttccgttgttcat
ttaggttcccacttaggttcccccatcccacttttcaggtgttcatttag
gttcccactttaggttcccaggttcccccatcccacttatccggtatgcc
ctCTTCAATCAATGAAATACAATCTAATATTTGCAAGGGGCGGAGCTTCA
AGCTAACATTATAAAGTCATATAGATAAAGTTTTCCAGGTAGGGAGATAA
TGGGGGCGTATCATGAGGAAGAATTGAAGGCGTAGTCCTGGTGGAGGGCG
GTTGAAAAGAACATATTATAAAGCATAACCCTTTTAACCATACTTAAGCC
TACAAAACTTAAGTATTGTCGAGAGTATTGTTTATCCGAggttcaaaaaa
aaaagcatttacAAAACATAAAGAGAGGTTAGCAAAGACTTAGCCTttgt
ttataataaaaaaagtgtcTACCTGGAACCAACCCTGTCCTGCTGATGGA
GAACAAACCATGTTATTAAAGCCTTATTAGTCTTAACTGATTTGATCCTC
CTGCaaaaaaaaCACATGACCGGGTAAGCAAAAGTCAAGTAATAAAACGA
GTTGAGAAGATACTTGTTCGGGATTATATGGAATTTTaatacaaaatatt
tctttatttcttttcagAATATTTGGCATGGTCTGAATACCACTTAGGGC
ACTTGGAACAAGCTGTTAACCTTACCGCACAGATTGTACACATTGATCCA
ACTCACAAATCAGCACCCATCAATCTAGAGTTATATCAACATGATTTAAA
AGCTAGTCAATTCAATCCTAACATCCGCAAGAAAGTTTTCCGGCGCGAAA
AAGATTGGCAGACACGTCACAACAATCTGTGTAACGGGAAAGAAGTCATG
GAGCAGGAAATTATTGATAAGTTGTATTGTGAATTCGATAACAAACGTCA
CCCACGTTTTATCCTAAAGCCACTCAAAGTTGAACATCTGTACAACGAGC
CAGGTTTAACAATGTATCATGATTTACTTCGTGACTGGGAGATAGATGCC
GTCAAAGAGAAGGCGCGTCCGCTTTTAAAACGCGCGACCGTTCATGATCC
GAAAACGGGTGAATTGGTTTTCGCAGATTATCGGATTAGTAAGAGCGCCT
GGTTAAAACCGGAGATGGATCAAATAGCAAACCACGTGATCAATAAAGTT
GGTGACGTCATTAATCTCGATATGCGATACTCAGAGAGTCTGCAAGTCCA
AAATTACGGTTTAGCGGGTCAATATGAGCCACATTTTGACCATTCAACTG
TCCGCACACCAAAACAATTCAAGGAATTGGGTGGAAACCGTATCGCTACT
ATGTTGTTATATATGAGTGAAGTTGAACGAGGAGGTGCCACCATTTTTGT
TAACACTGGCCCAGGAGTCGCCATCTGGCCGGAGAAAGGTGCCGGTGTCT
TTTGGTATAATCTATTACGTAATGGTGATGGAGATAAAAAGACAAGACAT
GCAGGCTGTCCAGTTCTTGTTGGACATAAATGGGTGTCTAACCTGTGGAT
ACATGAACATGGACAAGAGTTTAGAAGGCAATGCTCGCTAAATATGCatg
aataa Coding sequence (CDS) from alignment at sc0000098_pilon:1085627..1091631+ >XLOC_005173 ID=XLOC_005173|Name=XLOC_005173|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3258bp|location=Sequence derived from alignment at sc0000098_pilon:1085627..1091631+ (Clytia hemisphaerica_ch_hm2_pilon)
aaaaaagataaagaaaaaatgagGATTATATTACAGATTTTGTTTTTGGT
TATACTGCTTTTTGAAACTGAAGCCAAATCAAAAAGCGAAGAATACCAAA
AACcaaaacatgatttttttacttcGGCGTCAGATATGGAAGTattgtta
aatgttgaaaagaaGTTGTCTAAGAAGTTTCTTAGATATGTTCGTAAAGA
AGAGGAGAGGCTTGATAAGTTGGAGGATGAGATACGAAACATTGAAGATG
GTTGGCCACAACCAGGTCGTAGTAAAGCTCAATGGTTATCACACGTCACT
AACTCGTACACTATTTTAAAGAGATTCTCAACCTTTTGGCCGAAAATTGG
TGATTTTTCAAAGTCTAATACAACCAAAGATCACATGCTGAGATTGTTTT
CTGATTTAAGTCGAATCAAAGAATCACTTCCCGCCGAGGAAGATATGAAA
GGAGCGTTGAATGCTGTCTTCAGGTTACAAGACACTTATGATTTACCTGC
AGCAGATTTTATTGATGGTTTGGGAGGAGACCGCGCGCATAAATTAAGCG
TTGAAGAGATTTTCGAGATTGGTTTTCTATGTGTAGGCATCAATGATCAT
TACCACGCACAGCAATGGTTAAACGAAGCTCTGAACCGCTTCCCGGTTGG
CATACAACAAGTTGGATTCTTAGATAGAATCTCCCTTTTAGaaaaaagat
aaagaaaaaatgagGATTATATTACAGATTTTGTTTTTGGTTATACTGCT
TTTTGAAACTGAAGCCAAATCAAAAAGCGAAGAATACCAAAAACcaaaac
atgatttttttacttcGGCGTCAGATATGGAAGTattgttaaatgttgaa
aagaaGTTGTCTAAGAAGTTTCTTAGATATGTTCGTAAAGAAGAGGAGAG
GCTTGATAAGTTGGAGGATGAGATACGAAACATTGAAGATGGTTGGCCAC
AACCAGGTCGTAGTAAAGCTCAATGGTTATCACACGTCACTAACTCGTAC
ACTATTTTAAAGAGATTCTCAACCTTTTGGCCGAAAATTGGTGATTTTTC
AAAGTCTAATACAACCAAAGATCACATGCTGAGATTGTTTTCTGATTTAA
GTCGAATCAAAGAATCACTTCCCGCCGAGGAAGATATGAAAGGAGCGTTG
AATGCTGTCTTCAGGTTACAAGACACTTATGATTTACCTGCAGCAGATTT
TATTGATGGTTTGGGAGGAGACCGCGCGCATAAATTAAGCGTTGAAGAGA
TTTTCGAGATTGGTTTTCTATGTGTAGGCATCAATGATCATTACCACGCA
CAGCAATGGTTAAACGAAGCTCTGAACCGCTTCCCGGTTGGCATACAACA
AGTTGGATTCTTAGATAGAATCTCCCTTTTAGAATATTTGGCATGGTCTG
AATACCACTTAGGGCACTTGGAACAAGCTGTTAACCTTACCGCACAGATT
GTACACATTGATCCAACTCACAAATCAGCACCCATCAATCTAGAGTTATA
TCAACATGATTTAAAAGCTAGTCAATTCAATCCTAACATCCGCAAGAAAG
TTTTCCGGCGCGAAAAAGATTGGCAGACACGTCACAACAATCTGTGTAAC
GGGAAAGAAGTCATGGAGCAGGAAATTATTGATAAGTTGTATTGTGAATT
CGATAACAAACGTCACCCACGTTTTATCCTAAAGCCACTCAAAGTTGAAC
ATCTGTACAACGAGCCAGGTTTAACAATGTATCATGATTTACTTCGTGAC
TGGGAGATAGATGCCGTCAAAGAGAAGGCGCGTCCGCTTTTAAAACGCGC
GACCGTTCATGATCCGAAAACGGGTGAATTGGTTTTCGCAGATTATCGGA
TTAGTAAGAGCGCCTGGTTAAAACCGGAGATGGATCAAATAGCAAACCAC
GTGATCAATAAAGTTGGTGACGTCATTAATCTCGATATGCGATACTCAGA
GAGTCTGCAAGTCCAAAATTACGGTTTAGCGGGTCAATATGAGCCACATT
TTGACCATTCAACTGTCCGCACACCAAAACAATTCAAGGAATTGGGTGGA
AACCGTATCGCTACTATGTTGTTATATATGAGTGAAGTTGAACGAGGAGG
TGCCACCATTTTTGTTAACACTGGCCCAGGAGTCGCCATCTGGCCGGAGA
AAGGTGCCGGTGTCTTTTGGTATAATCTATTACGTAATGGTGATGGAGAT
AAAAAGACAAGACATGCAGGCTGTCCAGTTCTTGTTGGACATAAATGGGT
GTCTAACCTGTGGATACATGAACATGGACAAGAGTTTAGAAGGCAATGCT
CGCTAAATATGCatgaataaAATATTTGGCATGGTCTGAATACCACTTAG
GGCACTTGGAACAAGCTGTTAACCTTACCGCACAGATTGTACACATTGAT
CCAACTCACAAATCAGCACCCATCAATCTAGAGTTATATCAACATGATTT
AAAAGCTAGTCAATTCAATCCTAACATCCGCAAGAAAGTTTTCCGGCGCG
AAAAAGATTGGCAGACACGTCACAACAATCTGTGTAACGGGAAAGAAGTC
ATGGAGCAGGAAATTATTGATAAGTTGTATTGTGAATTCGATAACAAACG
TCACCCACGTTTTATCCTAAAGCCACTCAAAGTTGAACATCTGTACAACG
AGCCAGGTTTAACAATGTATCATGATTTACTTCGTGACTGGGAGATAGAT
GCCGTCAAAGAGAAGGCGCGTCCGCTTTTAAAACGCGCGACCGTTCATGA
TCCGAAAACGGGTGAATTGGTTTTCGCAGATTATCGGATTAGTAAGAGCG
CCTGGTTAAAACCGGAGATGGATCAAATAGCAAACCACGTGATCAATAAA
GTTGGTGACGTCATTAATCTCGATATGCGATACTCAGAGAGTCTGCAAGT
CCAAAATTACGGTTTAGCGGGTCAATATGAGCCACATTTTGACCATTCAA
CTGTCCGCACACCAAAACAATTCAAGGAATTGGGTGGAAACCGTATCGCT
ACTATGTTGTTATATATGAGTGAAGTTGAACGAGGAGGTGCCACCATTTT
TGTTAACACTGGCCCAGGAGTCGCCATCTGGCCGGAGAAAGGTGCCGGTG
TCTTTTGGTATAATCTATTACGTAATGGTGATGGAGATAAAAAGACAAGA
CATGCAGGCTGTCCAGTTCTTGTTGGACATAAATGGGTGTCTAACCTGTG
GATACATGAACATGGACAAGAGTTTAGAAGGCAATGCTCGCTAAATATGC
atgaataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:1085627..1091631 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 694-1629:5070 |
| Aaloc | 1-690:1 |
|
