|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000245_pilon:401160..404208- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_005149 ID=XLOC_005149|Name=XLOC_005149|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3049bp|location=Sequence derived from alignment at sc0000245_pilon:401160..404208- (Clytia hemisphaerica_ch_hm2_pilon)
CAGCAAATTACCAAACTTAAAGATGAACATCAAAAAGAGATTGAGAAACT
CAAAATGGAATTTAAGATTCAACAACTGGAATCTGAAAATGAGAAAACGT
TGAAAATCATGCAGCTAGAAAAAGAAATTCAAACTTTGTCTCATCAATTT
GAGATGTTCAAGTTAAAGAATTCTCGTGAATCTCAATCAAGTCAAATTCA
AGCTGATCAACAACTCCAAAAACAGAAAGACGAACTGCAAAATAAGTTAG
TTGAAAAGGAGAAACAATTAGTAGCCAAAGAGCACGAAATGGTTCTTTAT
AAGAAAGAACAAGAAATGGAAACTGATGCAAAAGAAAATGAATGCAAAAT
GAAAATGAAAGATTTGGAAAATGAACACAAAATTAAAACGTTAAAAACGG
AGATAAAGTTGAACGAGCTGGAGAAAGAAATGACAGAGAAAGAAGCAACT
GTCCAACATTTGAACAGAGAAATTGAAAATTTGAAAAGGGTCATTCCAAA
CCAAAACCAAGCTGCGGATAAAGTTGGAGAAAATATGACGACGATCGATA
GTTTGGTTTGGGGAGCAGAATATTTTCACGAAGGAAGTAAATCTTCACTT
TTGTACCCTTCTTATGGTGACTGGTACAAAGCGATTTCCGCGATGATGGG
AAATAAGCAATTGTTCAAGACGGATAAATATTTGTTCATGAGAAATGAAT
TCAATGAGTACCATAAATATCTGGATTTCGTGAACAGAAAAGACAACAGT
TACGAAGAAGATTTGATTGATTTTCTGGTTGAAGATTTGAAAACTGCATG
GGAAAATGCAACTTTCTTTCTTCTCCATACAAAGGATTTTGGGAAGCATT
TAAAGTTTGGACGAAAGTTTCAGCACGCTTCTTTTAAATATTGGCGTTTT
GATAATGTTTCAAAAGATTTTTATTTCGGTGATAAACAATCCGCAATTGT
TTTTGGGATTTTAAAGTAAATCAAATATACCAAAGATAGGCTTTGATTGT
TTTATCATTTCTGAGTTAATTTTTGAGAGAAGGATTTAATTCATGATATT
CATGACGTAATGTTTTCTACGGAAAGACCCCGGTTTTTGCCAGTAGTGGC
AACTTTTATACAACTTTTTTCTAGTTTAAAAGTGCCACTACTGGCTAAAA
CCGGGGTATTTCCGTAGAAAACATTACGTCATGAATATCATGAATCAGAT
GGGGTCAGTAACCAGCTGACACACAACTTTGCTTTAACGTACATTTAACG
TTTAATGAACCCCTAACGTTAGATGAATAGTGGATGCACTTTATACGAAA
ATTTTAGTATCTTTAGATTTAAGTACAGTATGGAAAAAATTTTCCAAAAG
AAAGAAATTATTTTAAATCATTCATTATGACTTGTTTCTTTTCTCAAACA
TTTTGTGACCTACCTTTTATACTGTATTGAGAAAGATCTGACAAAGATCG
CCAAAAAGACTCGGGCCTTTCCAGTGAGAATTTCGAAGAAAAAATTTAGT
GGAAAATAAAGCGCTTAAATATCTTTCCAACGATACCAAATCTTTATTAT
ATTTATATTTGTTATATTATACGACAGCTGATTGAAAAGTTATTGTCAAA
AAAAAAATTACTGCACACCTTTTTGACACAGATATATATAGGGCGAATTT
TCGGTTATTTCTTACTTGATACCCTATTTTACCGTTTTGACCTTTAATTT
ATGCAAAATTCAGCCATTCAAGGCTGAGGGTTGTTCTTAAGGCACTTTAA
GGCATATTAGGGGATGAAAAACAAAATTTCTTCCGTCGCCCCAAAGCATG
ATCGCACCTCTTTGTTACTGTATTTTTGGCCTTTCCACTCTCTGCTCTGC
AAATGTTCATAACTAAATTTATGATCAGTTGTTATTACTTTGAAATTTTT
AAGCGCCTGGATAATCCCTCGAATTAAATGAATTTTTGTTGGGAAACTCC
ATAGACGCCAGACTCTCTGGAATAATTCGCCTCGATTTATATAAATAACT
GTGCTACTATATTTCAAAGTGAAAAAGTGAAAAAGTGAAAAATCACAGCG
GAAAGCTAAGATATTCTTCATATTTTGTGATTTCTTCTTAGATTAATTGA
ATAGTTAAATTATAAATTGAAGAATGGATTCTGCGTATTCTGACGAAAGG
AATATGGCTCACAGTGCTAGTGGGAGGAATGTGCACAGAGTTGCTGATCA
GCGAAATTACAAAACTCAAAAATGAACATCAAAAAGAGATTGAGAAACTC
AAAATGGAATTTAAGATTCAACAACTGGAATCTGAGAACGAGAAAACGTT
GAAAATCATGCAGTTAGAAAAAGAAAATCAAACTTTATCTCATCAATTTG
AGATGTTCAAATTAAAGAATTCTCGTGAATCTCGATTAAGTCAAGTTCAA
GCTGATCAACAACTCCAAAAACAGAACGACGAGCTGCAAAATAAGTTGAG
TTGAAAAGGTACAAACGGAGCAAGTAACAAAATGGAGGGAAAAATGAACG
AAATGGGAAAAGAACGGAGAAAGAAGCAACTGTCCAACATTTAAGCGACA
AAAATGAAAATTTGAAAAGGCATTCCAAACCAAAACCAAGCTACGGATAA
AGTTGAGGAAAATATGACGACGATCGATCTGTTTGGTTTGGGTAGCAGAA
TATTTTCATGAAGGAAATAAATCTTCACTTTTGTACCCTTCTTATGGTGA
CTGGTACAAAGCGATTTCCGCAATGATGGGAAATAAAAAAGTGTTCAAGA
AGGATAAATATTTGTTCATGAGAAAGGAAATCAATAAGGACTATAAATAT
CTGTGTTTCGTGAACAGAAAAAAAAACAATTACAAAGAAGAATTGGGGGA
TTTTCTTGTTGAAGATTTGAAAATTGTATGGGCAACTGCAACTTTCTTTC
TTCTTCATACAAAGGATTTTAGGAAACGTTTAAAGTTTGTACGAATGGAT
CAGGGCCCTTCTTGTGAATATTGGCGTGTTGATAATGTTTCAAAAGATTT
TTATTTTGGTGATAAACGATCTGCAATTGTTTTTGGAATTTTGAAATGA Coding sequence (CDS) from alignment at sc0000245_pilon:401160..404208- >XLOC_005149 ID=XLOC_005149|Name=XLOC_005149|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1938bp|location=Sequence derived from alignment at sc0000245_pilon:401160..404208- (Clytia hemisphaerica_ch_hm2_pilon)
CAGCAAATTACCAAACTTAAAGATGAACATCAAAAAGAGATTGAGAAACT
CAAAATGGAATTTAAGATTCAACAACTGGAATCTGAAAATGAGAAAACGT
TGAAAATCATGCAGCTAGAAAAAGAAATTCAAACTTTGTCTCATCAATTT
GAGATGTTCAAGTTAAAGAATTCTCGTGAATCTCAATCAAGTCAAATTCA
AGCTGATCAACAACTCCAAAAACAGAAAGACGAACTGCAAAATAAGTTAG
TTGAAAAGGAGAAACAATTAGTAGCCAAAGAGCACGAAATGGTTCTTTAT
AAGAAAGAACAAGAAATGGAAACTGATGCAAAAGAAAATGAATGCAAAAT
GAAAATGAAAGATTTGGAAAATGAACACAAAATTAAAACGTTAAAAACGG
AGATAAAGTTGAACGAGCTGGAGAAAGAAATGACAGAGAAAGAAGCAACT
GTCCAACATTTGAACAGAGAAATTGAAAATTTGAAAAGGGTCATTCCAAA
CCAAAACCAAGCTGCGGATAAAGTTGGAGAAAATATGACGACGATCGATA
GTTTGGTTTGCAGCAAATTACCAAACTTAAAGATGAACATCAAAAAGAGA
TTGAGAAACTCAAAATGGAATTTAAGATTCAACAACTGGAATCTGAAAAT
GAGAAAACGTTGAAAATCATGCAGCTAGAAAAAGAAATTCAAACTTTGTC
TCATCAATTTGAGATGTTCAAGTTAAAGAATTCTCGTGAATCTCAATCAA
GTCAAATTCAAGCTGATCAACAACTCCAAAAACAGAAAGACGAACTGCAA
AATAAGTTAGTTGAAAAGGAGAAACAATTAGTAGCCAAAGAGCACGAAAT
GGTTCTTTATAAGAAAGAACAAGAAATGGAAACTGATGCAAAAGAAAATG
AATGCAAAATGAAAATGAAAGATTTGGAAAATGAACACAAAATTAAAACG
TTAAAAACGGAGATAAAGTTGAACGAGCTGGAGAAAGAAATGACAGAGAA
AGAAGCAACTGTCCAACATTTGAACAGAGAAATTGAAAATTTGAAAAGGG
TCATTCCAAACCAAAACCAAGCTGCGGATAAAGTTGGAGAAAATATGACG
ACGATCGATAGTTTGGTTTGGGTAGCAGAATATTTTCATGAAGGAAATAA
ATCTTCACTTTTGTACCCTTCTTATGGTGACTGGTACAAAGCGATTTCCG
CAATGATGGGAAATAAAAAAGTGTTCAAGAAGGATAAATATTTGTTCATG
AGAAAGGAAATCAATAAGGACTATAAATATCTGTGTTTCGTGAACAGAAA
AAAAAACAATTACAAAGAAGAATTGGGGGATTTTCTTGTTGAAGATTTGA
AAATTGTATGGGCAACTGCAACTTTCTTTCTTCTTCATACAAAGGATTTT
AGGAAACGTTTAAAGTTTGTACGAATGGATCAGGGCCCTTCTTGTGAATA
TTGGCGTGTTGATAATGTTTCAAAAGATTTTTATTTTGGTGATAAACGAT
CTGCAATTGTTTTTGGAATTTTGAAATGAGGTAGCAGAATATTTTCATGA
AGGAAATAAATCTTCACTTTTGTACCCTTCTTATGGTGACTGGTACAAAG
CGATTTCCGCAATGATGGGAAATAAAAAAGTGTTCAAGAAGGATAAATAT
TTGTTCATGAGAAAGGAAATCAATAAGGACTATAAATATCTGTGTTTCGT
GAACAGAAAAAAAAACAATTACAAAGAAGAATTGGGGGATTTTCTTGTTG
AAGATTTGAAAATTGTATGGGCAACTGCAACTTTCTTTCTTCTTCATACA
AAGGATTTTAGGAAACGTTTAAAGTTTGTACGAATGGATCAGGGCCCTTC
TTGTGAATATTGGCGTGTTGATAATGTTTCAAAAGATTTTTATTTTGGTG
ATAAACGATCTGCAATTGTTTTTGGAATTTTGAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000245_pilon | genome | sc0000245_pilon:401160..404208 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 583-990:409 |
| Aaloc | 22-579:3050 |
|
