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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000245_pilon:308562..310910+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_005127 ID=XLOC_005127|Name=XLOC_005127|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2349bp|location=Sequence derived from alignment at sc0000245_pilon:308562..310910+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAGAGAAACCAACGCAATTTTATTCGTAGCAATCTTTAACATTTT
CATGAAAGAATTGATTATCGAAGGTAAGACGTATTTGTAATCAACATGGA
AGTTCTAACTGAGTTTATCCAGGGAGGGGAAGGGATACTCAACTTAAAAA
CACAAATTCGAGCGAGCATTTAACATTGCATATTGCACGGCATTTTGGTC
CTACTTTTATaagggatgttcttaactttttgagttttaagcctaaaaat
gttcttaacatgttcttaatttcacgtaatttcactattttgtgcGTATT
TTGGTCCATTGTCCTAAGcaattgggtgttttaaagctttacaaagcctt
aaaatgttctaaacatgttcttaaaattttagcCATCGTAGCCTTGTTTT
TATAcagtttcttcttataaaaaaaacatttaaaaacattatttacagat
attttctttcttatcattAGGCAAACCAACATCAATAGTAGACTGCAGTA
ACCCAAAATGCATCAATGTTCCCATAAAACATGTCTGTGGTGAGAAAAAT
GGGTCAATGTTGACTTTTGAAAACAGATGTGAACTGGAGCTAGCCAAATG
CAAAATTCCTGAAATCACTTTTGTTCAGGAAGGAAAATGCAAAGGTGAGA
TATTTCATCCATAACCAACTAATAATTTGGACCAGTAAAGAATAAAAGGA
AGTCCGAGAAAATTCATCAAGCCAACATATTCAaagcaaaagatgaaaat
ttttgatttagaAACAGCTATATTTTCATGTACATCATTCAGGCAAATTT
CTAAATCGAAGATTTTCACCTTTTGCTTTGTAGATCTTTGATCGGCTAAT
AAATACTGTACTTTTTTGGCGCTTCAATTATGTCTATAACGCTCATTCAA
ATAATGTTCTCATTACGTTAACATAACGTCCACATAAATTTATCATAACG
TTCTCAAAACGTCCATGCAAGTTCACACAGCCTATTTTTAACGCCCATTT
TGAAATTAGATCGATATTAAAAACAGGATTTCACAAATCTAAAGGTTTTA
AAGATGTGCTATCAAAGAAGGAGGAGGGGTTCgaaggggcgtttaaaaga
agggggtgtttattcaaagtaatacggtaataAATTTTCACTCTAATTAT
TATAGAAAAATGGCGTTGTAAAGATGTTAAATGCCCAACAGGTCAATCTT
GTATTTATGATCAAGATGGTTTCTCATACTGCATCGAAACCAACTGCGAA
CAAGCATTGACCAAGAAATGTCCAGTAGAAGGCAAGAAAGTTTGCGGTTT
GAACAATATCACTTATGAATCGGAATGCCACTTAGAAAAAGAAGCCTGTA
ACACACACCAAGTGCTTTTGAAAAGATACGATGGTTCTTGCGAAGGTACA
ggataaaatattttacttcTTCAAGTCATTGTGCTAgctcttttttcaaa
tatcaccCACTTAAATTTTGTGGCTAGACTAGTAAACCTCGTTGTTGTAT
TTTCCCAGCCGGCACActacgtcaaaacaacgtccatttgagattcataa
cgtccaaataacgttatttgaacgttaaaacaacgttgtgtgccagctgg
gttgttGCAGCTTACCCTTTCATTAGACTACTCACTACGTACATTGAATA
CAACGACTAGATCTAAGATAGGGATTTTTACTAAATAAACGGCTTTCCAA
ACCTCTCTCTTCCGGTAATTAATATTCATATAAGAACCTAAGTAATATTC
CCGTTTTACCGTGTCTCAGGAAAGGTGCTTGCTAGTCTGAACCATAgatt
tgtaaagcccgaagggctagatgtcgggctttaagccatcacaggcaaaa
gtgaatatcggaaaaaaatattgttgctattgttttcgaaaacccgcaaa
agcttcttattggtcaagcgctgaaattctattgtaatgtcacgtgactt
aggtaggatttcttaCCTAACTACGGCACACtttttagcccttcgggctt
tacaaatcTATGGTCTGGACTactttatttgataaaaaccCGTATTTCTT
TCCTGCCTACTAGGTTAGTTAATTCTGTTCACTTTTAAAATTCACCAAGA
TTCTCTAATCTCTTTATAGAAAAGAAGACATGCGCAGATACAGTATGTAG
GAAAGGAGAATCTTGCGTCACAGCTAAAGATGGTACCCCTCGTTGTATTG
AATGTTGTTTAAATAAGAAAGACACAAATTATAAAGTCTCAATGTGTGGT
AGTGACGGTAAAACATATTCCTCTTGGTGTGAAATGCGCGCAGAGAGCTG
TCGCTTAGGTAAGCTGATCGAGTTCGTTGATTGGCTATGCTCGAAATAG Coding sequence (CDS) from alignment at sc0000245_pilon:308562..310910+ >XLOC_005127 ID=XLOC_005127|Name=XLOC_005127|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1434bp|location=Sequence derived from alignment at sc0000245_pilon:308562..310910+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAGAGAAACCAACGCAATTTTATTCGTAGCAATCTTTAACATTTT
CATGAAAGAATTGATTATCGAAGATGGCGAGAGAAACCAACGCAATTTTA
TTCGTAGCAATCTTTAACATTTTCATGAAAGAATTGATTATCGAAGGCAA
ACCAACATCAATAGTAGACTGCAGTAACCCAAAATGCATCAATGTTCCCA
TAAAACATGTCTGTGGTGAGAAAAATGGGTCAATGTTGACTTTTGAAAAC
AGATGTGAACTGGAGCTAGCCAAATGCAAAATTCCTGAAATCACTTTTGT
TCAGGAAGGAAAATGCAAAGGCAAACCAACATCAATAGTAGACTGCAGTA
ACCCAAAATGCATCAATGTTCCCATAAAACATGTCTGTGGTGAGAAAAAT
GGGTCAATGTTGACTTTTGAAAACAGATGTGAACTGGAGCTAGCCAAATG
CAAAATTCCTGAAATCACTTTTGTTCAGGAAGGAAAATGCAAAGAAAAAT
GGCGTTGTAAAGATGTTAAATGCCCAACAGGTCAATCTTGTATTTATGAT
CAAGATGGTTTCTCATACTGCATCGAAACCAACTGCGAACAAGCATTGAC
CAAGAAATGTCCAGTAGAAGGCAAGAAAGTTTGCGGTTTGAACAATATCA
CTTATGAATCGGAATGCCACTTAGAAAAAGAAGCCTGTAACACACACCAA
GTGCTTTTGAAAAGATACGATGGTTCTTGCGAAGAAAAATGGCGTTGTAA
AGATGTTAAATGCCCAACAGGTCAATCTTGTATTTATGATCAAGATGGTT
TCTCATACTGCATCGAAACCAACTGCGAACAAGCATTGACCAAGAAATGT
CCAGTAGAAGGCAAGAAAGTTTGCGGTTTGAACAATATCACTTATGAATC
GGAATGCCACTTAGAAAAAGAAGCCTGTAACACACACCAAGTGCTTTTGA
AAAGATACGATGGTTCTTGCGAAGAAAAGAAGACATGCGCAGATACAGTA
TGTAGGAAAGGAGAATCTTGCGTCACAGCTAAAGATGGTACCCCTCGTTG
TATTGAATGTTGTTTAAATAAGAAAGACACAAATTATAAAGTCTCAATGT
GTGGTAGTGACGGTAAAACATATTCCTCTTGGTGTGAAATGCGCGCAGAG
AGCTGTCGCTTAGGTAAGCTGATCGAGTTCGTTGATTGGCTATGCTCGAA
ATAGAAAAGAAGACATGCGCAGATACAGTATGTAGGAAAGGAGAATCTTG
CGTCACAGCTAAAGATGGTACCCCTCGTTGTATTGAATGTTGTTTAAATA
AGAAAGACACAAATTATAAAGTCTCAATGTGTGGTAGTGACGGTAAAACA
TATTCCTCTTGGTGTGAAATGCGCGCAGAGAGCTGTCGCTTAGGTAAGCT
GATCGAGTTCGTTGATTGGCTATGCTCGAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000245_pilon | genome | sc0000245_pilon:308562..310910 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 490-717:2122 |
| Aaloc | 250-486:1158 |
| Aaloc | 76-246:473 |
| Aaloc | 1-72:1 |
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