XLOC_005108 (mRNA) -

Overview
NameXLOC_005108
Unique NameXLOC_005108
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000245_pilon:280871..282082-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005108 ID=XLOC_005108|Name=XLOC_005108|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1212bp|location=Sequence derived from alignment at sc0000245_pilon:280871..282082- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTCTAGCCGATCAAATCTTGATGCTGATTCATTAAGATCCATCAA TTCCCAAACACCATTAATGAGAGGTGGAATACACATCCCTTTGATGAACA ACAGTCTGGAGTTTCCCGAATATGATTTCCTGTTCAAAATACTCATCATT GGAGATTCAGGAACAGGGAAAAGTTCATTGTTGATCAGATTCTGTGATGA CTTTTTCTCGGATAAGTTCATCAGTACCATTGGTGTAGACTTTAAAATCA AGACGATCGCTTTAGATGAAAAACTGGTCAAGTTACAGGTATATAGTACA GTACAGTTCACACTCTAAAATTCGACGTTCTACTATTCAATACACAAGAA ACTCTTATAAACAACGCTCTACCATTCGACATACATCTTTATTCGATGAT ATGAACCCAATTCCCCTTGAAAATCAAATTACAGAGAGTCAGCTGTAAAT AGAACACAAGTTCCCTCGAATTATTTTCTTCGTTTTTACGTAGCTACAAA TGCCACGAAATCGCTTTAGAAAGAGCTATACACTACGGGTTCGAATTAGC TATCTGTTTTAATTTCGTGTAAACTGTATTTACGAAAAACAAGTTGTCTA TTCGGATTACATGTGATATTTTCGAGCAAATTACACAAAAAATCAAAACA AAAGAAACTAACCGGAAGTCCTGGGTTTCTCAAAGCCAAGTCCAATTCAG CCTGTTAATCTTTCTTTCGTTTTTTGGTGCTATTACTTTCTTTTATATTG TTGCATTTTTAGATTTGGGATTCTGCCGGACAGGAGCGTTTCCGCACATT AACCACTACATATTACCGCGGTGCACACGCCATTATTATTGTTTATGACG TCACAGATCGAAGTACTTTTGTTAATATCGGCACATGGTTAGCGGAGATC AATAAAAACGCTACAGAGAACGTTATAATAGCCCTTGTTGGAAATAAATG CGATATTCAAGAACGACAAGTTGAATATGAGGCCGCCCGGGCGTTTGCGG ACCGCCTCGGGGTGTTATTTTTAGAAACCAGCGCCAAAGAAGATATAAAT ATACAACGACTTTTTAACGAATTAGCGCACGAATTAAAGAAGAGACTTGG TGATCCTTTAGAGAGTAAACATAACAGTAGTGATTTTTCGCGGACAGTAA ATTTTACGGGATCGGAATGCGGCGAAAAAGACGGATATCTTGCGCAATGT TGTCGCATCAGG

Coding sequence (CDS) from alignment at sc0000245_pilon:280871..282082-

>XLOC_005108 ID=XLOC_005108|Name=XLOC_005108|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1476bp|location=Sequence derived from alignment at sc0000245_pilon:280871..282082- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTCTAGCCGATCAAATCTTGATGCTGATTCATTAAGATCCATCAA
TTCCCAAACACCATTAATGAGAGGTGGAATACACATCCCTTTGATGAACA
ACAGTCTGGAGTTTCCCGAATATGATTTCCTGTTCAAAATACTCATCATT
GGAGATTCAGGAACAGGGAAAAGTTCATTGTTGATCAGATTCTGTGATGA
CTTTTTCTCGGATAAGTTCATCAGTACCATTGGTGTAGACTTTAAAATCA
AGACGATCGCTTTAGATGAAAAACTGGTCAAGTTACAGATGACTTCTAGC
CGATCAAATCTTGATGCTGATTCATTAAGATCCATCAATTCCCAAACACC
ATTAATGAGAGGTGGAATACACATCCCTTTGATGAACAACAGTCTGGAGT
TTCCCGAATATGATTTCCTGTTCAAAATACTCATCATTGGAGATTCAGGA
ACAGGGAAAAGTTCATTGTTGATCAGATTCTGTGATGACTTTTTCTCGGA
TAAGTTCATCAGTACCATTGGTGTAGACTTTAAAATCAAGACGATCGCTT
TAGATGAAAAACTGGTCAAGTTACAGATTTGGGATTCTGCCGGACAGGAG
CGTTTCCGCACATTAACCACTACATATTACCGCGGTGCACACGCCATTAT
TATTGTTTATGACGTCACAGATCGAAGTACTTTTGTTAATATCGGCACAT
GGTTAGCGGAGATCAATAAAAACGCTACAGAGAACGTTATAATAGCCCTT
GTTGGAAATAAATGCGATATTCAAGAACGACAAGTTGAATATGAGGCCGC
CCGGGCGTTTGCGGACCGCCTCGGGGTGTTATTTTTAGAAACCAGCGCCA
AAGAAGATATAAATATACAACGACTTTTTAACGAATTAGCGCACGAATTA
AAGAAGAGACTTGGTGATCCTTTAGAGAGTAAACATAACAGTAGTGATTT
TTCGCGGACAGTAAATTTTACGGGATCGGAATGCGGCGAAAAAGACGGAT
ATCTTGCGCAATGTTGTCGCATCAGGATTTGGGATTCTGCCGGACAGGAG
CGTTTCCGCACATTAACCACTACATATTACCGCGGTGCACACGCCATTAT
TATTGTTTATGACGTCACAGATCGAAGTACTTTTGTTAATATCGGCACAT
GGTTAGCGGAGATCAATAAAAACGCTACAGAGAACGTTATAATAGCCCTT
GTTGGAAATAAATGCGATATTCAAGAACGACAAGTTGAATATGAGGCCGC
CCGGGCGTTTGCGGACCGCCTCGGGGTGTTATTTTTAGAAACCAGCGCCA
AAGAAGATATAAATATACAACGACTTTTTAACGAATTAGCGCACGAATTA
AAGAAGAGACTTGGTGATCCTTTAGAGAGTAAACATAACAGTAGTGATTT
TTCGCGGACAGTAAATTTTACGGGATCGGAATGCGGCGAAAAAGACGGAT
ATCTTGCGCAATGTTGTCGCATCAGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_005108XLOC_005108-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000245_pilongenomesc0000245_pilon:280871..282082 -
Properties
Property NameValue
Aaloc289-738:451
Aaloc1-288:1213