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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000045_pilon:1590762..1594253+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004971 ID=XLOC_004971|Name=XLOC_004971|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3492bp|location=Sequence derived from alignment at sc0000045_pilon:1590762..1594253+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATCAATAATTATGGAGGAGGATGTCTGGAATGAGAATGTTCGAGAAGC
TTCCAGTATTTGGCTGTTGATGGGCAAAGGTTATCGTATTTCCAGAAGCA
TCCGTTTACAATGGTTTTTCCAATATCTTAACAAGATCATTTCACCAAAA
TCTCCTGAAGAAATAGTAAGTCTGTTGTAAAAAATTCTGTCTATTCTCTT
GTcatcttttgtcattttatctttTGCTTCTTGACACTAACCTTTTTATA
CTGAAGTGATTTCGTGCTGGTTCTACTGTTTTACTTCAGCATCAATCATA
TGCAAAACACATTTCCTAACCTTTTATACATGAAAAGTATGTTATTATAC
TGTATAGCTTTTCCCTTGACATTCCAGGTAGATTCTGAAGAGGAACTTGA
GGTTCTGGCAATACTTGAGGGTGATAATGAGCATGACCTGCTCGCTACCA
AACAAATACAATCCTCTGAATCTATTGATCAAAGTCTACTTCGTATCACA
CCAGAGACTCGACTAACATTTTTGGATCGGCAATATCGTTTTGTGTATTG
TATTGATATGAGTCCCTCTATGGCTATGGTGGTAAGCTAGGGCTCTGAGC
TgacttttttaaaattatatggTTTTTACAAGAGCCTGATCGGGGTGGTC
TCGCTTAAATGGAGAAGTAAGGTGAAGTAAGGCTCAGTGTCTATAagaaa
tgattattttttctttggacaaaatttttttaaatttaaattcagATAAG
TTTTTAAAGCTTGGTTCATCACATACTAGTGTCATTTGCTAACTCAGCCC
CCTTTGGACCCCTTTAGATATTAATTACAATGACTTTTTCTAATCATTTT
ATGGTTATCCTTTATTGAAATTTTATAGGATAGCAAAACTGGAGAAGTTT
TGGTCGATGATATGTTCAACAGTATCAAAAACTCCCTAACTGGTCTTGTA
CAACCTGTAAGTAAACTTGTATCATTCAATGCAactgaaaacattttcat
ttcctTCTCTGTTTTTATGGATCTGTATTTGTTGATTGCAATAATTGCTC
AATTCTTTTAAAAGTAACCCATCCTGATCAGTTCATAACGATTTGAATCT
AAATTTGAAAAGGGTTGTCTGGGATCATTATCAACATCTGTGAGAAAGAT
AGGTGGGATTGCATGAAGCGTGACCAGTAAATTCAAAGCAACTAATAAGG
ATAATATAATTAAGGAAAAAATGTAATTCATTCATAATAAACTCATTAGC
GTGATTATCATAAGTaatatttgattctttttagtTTTGTGTTGGAAACA
GTCCTTTGGAGCTTTCTCCCAGGCTTGATATCACCGTTCTTGCTCACACC
TACACTGACAACAAAGAATGTCAAGTAAGTTTGCTGTGTTTTTAAGAAGG
GtttttttGTATATCTAATACTAAAGTATGTTAACCAAAAAGGACTGGGG
taacttaaaatatttttcatcaaaataacatAAAGTTGCACTTTAATCGA
TAAACTTTGTTTCAAGTGGCCCACctcttttaatgaaaaacaacAATATG
AATTTGTGTATCATAACCAAAAAGCATCTAAAGCAGTCTTAATTCTGCAA
CAGTTTCTGGCTGGACAGAAGTGACCCCAAACCTTAAATAAGCATACcac
atttgaaaaaagttttggccATAATACATTATTCTTCCTGAATTGGTGAA
TAATACTGCATTATGTCACCTTGATTGATTTGCACTATTATTGACTTATT
AATTTTAGGTACTGATGCAGGGattttgtttgaattcaaaGAACATCAAT
GATTTCTTATGTAAACTTAGAAGAAAATTACGAGAATTGTGTGAACGGTT
GATCAGTGGTATTGTCGAAAACAAGGTAGATTCTATGACTCTTATATACT
GAttattagattttcattttgtatgGATAAAACGAAAGAAGAGACTGctt
catatttttgtttttgtgtgtagACGAAAAGTCATTGATTTCAGGTACTA
CCTCAGTACCTCAGGTACCTGGGTACTATTCCACAATTTTTCCAAACTGC
AAAAGCTTGAAAACCATGTTAACAAGTTAATTATGCCTTTTCGTTAACAG
GACAAGGTTGACAATTCTCAAGGTTTTCAGAAGAATCAAACAAGTCTCTT
CCACATGATTCGTGACAGTCTACTAGCTTTGTACCTCCTTCCCAACAATG
CTTCTGCAGGTTTGAAAATGATCTCATATGATAGCAGGCACTTCTGATGA
ATAAAATGAACGTTTCAATTCgaaatttgaatattgatttttatagaatt
ttcatatttttaagaaaagaaagccaatttttttccaacaaCCCTCTCAA
AGTTAAAGGGAAAATGTGTCTCCTGCCATTTGCTGACATACAGTGttatt
aaacaaaagaatttgagcaatttttccccTTTTGTTGATAATTCTCTTTT
GTCAGCATTTTAAGAGGTGCGCATCCCTTCTtatcatgaaaaagaaaatc
tttaacaaGAGATTTGTATCCAACTTTAATGTTTTACTTTAGCTATCGTT
GTGGTCACTGATGGTGTGTTCATTCTGGAAAACGCATATTTCACAGATGC
ATTACTAGCACAATGTAGAAACTCACAATCTGTTGTGTCATTCTTGCAAG
TTGGAACTGGATTTCAAAGAGCCTCCGTAGAGTAGGTTGAAACACATCTT
TATATGGATCAAAATGGTGTCTTATCCTGTCTTATGCTCCCTACTTTATC
CACCCTTTTCAACAAAGTGTACTTACCCATGCAGTACCTTCTCAGTACTC
ACTGtcttttcaaatttagatttgTGTATTTGACTAGCATAACGGTAATT
CACTTCTTTTAAGTTAGGCGTTAAACATATTGGTCAACGTTAATAACGGG
CCTCGTGacatttaaagggacataaaagtaataaaatgtataaacattgc
gcgaaccattgtcattaaagagaacaattaaaatcacgtgtccaaaacaa
acttgtaaaacaattgaaacaatcaaaatcaggcatatttgtttttattt
tttattttgacatgtgacattttgtatcccgctgcatacgatttgtttac
aatttcgtcagtacttttatgtccctttaacaaGTACCAAAAGATATTAA
TGAGTGATCTGTTACCAGTCCTCTTATTTTGACCCAGCTAACAGCAAATT
TCACCTGTCCAAACCACGAAAGTTATTACAATACGCTGGTCGAAACATTC
TGTTTGCTGCCTCAAGTGCAATTTATTGATAATCTATTCACTGGGCTTGC
taagagttaatttttcattcgtcaGCCTATCAAAAACAAACCAGAACCAC
CGAGTAATACTTTCCCGAACtttcattttgcctaaaactTGTGTGTCTTT
TGTTCTCAAACAGGTTTGGTTTTGTACCTCATTGCGCATTGATGCAGTTT
ATTGCAACAGCCACGTCTGGTGCTTACCTTTTGCAATGCCCA Coding sequence (CDS) from alignment at sc0000045_pilon:1590762..1594253+ >XLOC_004971 ID=XLOC_004971|Name=XLOC_004971|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1962bp|location=Sequence derived from alignment at sc0000045_pilon:1590762..1594253+ (Clytia hemisphaerica_ch_hm2_pilon)
AAATCAATAATTATGGAGGAGGATGTCTGGAATGAGAATGTTCGAGAAGC
TTCCAGTATTTGGCTGTTGATGGGCAAAGGTTATCGTATTTCCAGAAGCA
TCCGTTTACAATGGTTTTTCCAATATCTTAACAAGATCATTTCACCAAAA
TCTCCTGAAGAAATAAAATCAATAATTATGGAGGAGGATGTCTGGAATGA
GAATGTTCGAGAAGCTTCCAGTATTTGGCTGTTGATGGGCAAAGGTTATC
GTATTTCCAGAAGCATCCGTTTACAATGGTTTTTCCAATATCTTAACAAG
ATCATTTCACCAAAATCTCCTGAAGAAATAGTAGATTCTGAAGAGGAACT
TGAGGTTCTGGCAATACTTGAGGGTGATAATGAGCATGACCTGCTCGCTA
CCAAACAAATACAATCCTCTGAATCTATTGATCAAAGTCTACTTCGTATC
ACACCAGAGACTCGACTAACATTTTTGGATCGGCAATATCGTTTTGTGTA
TTGTATTGATATGAGTCCCTCTATGGCTATGGTGGTAGATTCTGAAGAGG
AACTTGAGGTTCTGGCAATACTTGAGGGTGATAATGAGCATGACCTGCTC
GCTACCAAACAAATACAATCCTCTGAATCTATTGATCAAAGTCTACTTCG
TATCACACCAGAGACTCGACTAACATTTTTGGATCGGCAATATCGTTTTG
TGTATTGTATTGATATGAGTCCCTCTATGGCTATGGTGGATAGCAAAACT
GGAGAAGTTTTGGTCGATGATATGTTCAACAGTATCAAAAACTCCCTAAC
TGGTCTTGTACAACCTGATAGCAAAACTGGAGAAGTTTTGGTCGATGATA
TGTTCAACAGTATCAAAAACTCCCTAACTGGTCTTGTACAACCTtTTTGT
GTTGGAAACAGTCCTTTGGAGCTTTCTCCCAGGCTTGATATCACCGTTCT
TGCTCACACCTACACTGACAACAAAGAATGTCAAtTTTGTGTTGGAAACA
GTCCTTTGGAGCTTTCTCCCAGGCTTGATATCACCGTTCTTGCTCACACC
TACACTGACAACAAAGAATGTCAAGTACTGATGCAGGGattttgtttgaa
ttcaaaGAACATCAATGATTTCTTATGTAAACTTAGAAGAAAATTACGAG
AATTGTGTGAACGGTTGATCAGTGGTATTGTCGAAAACAAGGTACTGATG
CAGGGattttgtttgaattcaaaGAACATCAATGATTTCTTATGTAAACT
TAGAAGAAAATTACGAGAATTGTGTGAACGGTTGATCAGTGGTATTGTCG
AAAACAAGGACAAGGTTGACAATTCTCAAGGTTTTCAGAAGAATCAAACA
AGTCTCTTCCACATGATTCGTGACAGTCTACTAGCTTTGTACCTCCTTCC
CAACAATGCTTCTGCAGGACAAGGTTGACAATTCTCAAGGTTTTCAGAAG
AATCAAACAAGTCTCTTCCACATGATTCGTGACAGTCTACTAGCTTTGTA
CCTCCTTCCCAACAATGCTTCTGCAGCTATCGTTGTGGTCACTGATGGTG
TGTTCATTCTGGAAAACGCATATTTCACAGATGCATTACTAGCACAATGT
AGAAACTCACAATCTGTTGTGTCATTCTTGCAAGTTGGAACTGGATTTCA
AAGAGCCTCCGTAGACTATCGTTGTGGTCACTGATGGTGTGTTCATTCTG
GAAAACGCATATTTCACAGATGCATTACTAGCACAATGTAGAAACTCACA
ATCTGTTGTGTCATTCTTGCAAGTTGGAACTGGATTTCAAAGAGCCTCCG
TAGAGTTTGGTTTTGTACCTCATTGCGCATTGATGCAGTTTATTGCAACA
GCCACGTCTGGTGCTTACCTTTTGCAATGCCCAGTTTGGTTTTGTACCTC
ATTGCGCATTGATGCAGTTTATTGCAACAGCCACGTCTGGTGCTTACCTT
TTGCAATGCCCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000045_pilon | genome | sc0000045_pilon:1590762..1594253 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 904-981:3415 |
| Aaloc | 766-900:2545 |
| Aaloc | 655-762:2101 |
| Aaloc | 538-654:1759 |
| Aaloc | 448-537:1285 |
| Aaloc | 370-447:879 |
| Aaloc | 166-369:378 |
| Aaloc | 1-165:1 |
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