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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000339_pilon:318211..319902+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004942 ID=XLOC_004942|Name=XLOC_004942|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1692bp|location=Sequence derived from alignment at sc0000339_pilon:318211..319902+ (Clytia hemisphaerica_ch_hm2_pilon)
AACGCAAGCACAATGGCTACGTCCAATGACAATACATCTTATATTGATGA
AATGTATAAGTATGATTGCAAGCAACGAGAACCGTTCAGTAATGATAAAA
AGATAAGCCAAAATGATGGTGCTTTTATGACAGGAAGCGCAGCCGAAGGT
GCGTTCATTTGTCGTGGTGTCTATGAAATAGTTACCAACATTGAAATGGA
TATCATGGAACCTTTTGCTAAAATCCCTGCCAATCAAAAGAACAATGTTT
TAGAATCAACTAACGTTATCGGATATTATCGTGTGAAATGGAATGAAGAG
TTGAGAGGATGTTTACAACAAGATTTCCATCAATCTTTATTATTGCTGGA
TAATAATTATAATCCGGAATATCTAGATGGTGAAAGCATTGATATCAATG
GACGGGCCCTTTCGAATAACGATGGTGACGAAAGCACTGAATTAGGATAT
AAACATAACAAAGGGACACCGAACCTTTTCTCAGATGTGAATTTTGTGGT
TCACATCGAAATTGATCATATAAAGTGCATTGAACTTGACTTTTGGCCGG
ACTTTTTGCATCCTTGGTTTGAACGGGAACGTTATTGGCCATCCCCTGAA
ATCGTCAAAGAAATTGACGACAATAAATGTCATTTGGTTTTGAAATCAAC
ACCTGGATCCAACAGAAATGACGAgtggagaatttctttttccaaagctg
aagtcattttagctaaaagaaaatctcattttcaaaataagtgTTATTTA
TTGGCCAAATTTATGTATTATGCAAACCTTAAACAAATAGATGATCCAGA
GACAGGCCGGCATATTTCTTCGTATCTCCTTAAAACAACAATGTTGCACA
TGTTGGAACAAACTCCACCAGAACACTGGAAAGATTGGGAAGAGAGAAAA
AGTTATTGTCAAGTTGTCATCATGTTGTATGAGCGCCTTGCTGAAAGTTT
ATCCAAAGGATATCTACCATCTTACTTTGTTGACGAGATCAATTTACTTG
AAGGATATCCTAAAAGATATCTCAAGAAAATGGGTGAATTGGCTTTGGAG
CTTTGTAAATTCTGGTCGACGTTAGAAGGTGAGGATAACTTTCATTGCAC
TATCAAAAGATTATACAGCGATATAAAGAATAAGATGGAGACGCCAGATG
CACAAGCCAAAGTAGAAGGTGATATTAAATCTCACATGGAAAAGGCACTC
GGAAATATTGAAAACAatcccaaaacaaaacaagccTTCAGAATAGCTGC
TAATGGGCTACTGGAGGATATTAATGTTCTTAAATCGCGTTCTAATATTG
ATGGTTTGACTACTAGTATTGATGCATTAAAACTTAGTGAACAGTTTAGG
ACAAGGCTCAATGGAGAATTAGGTACCGAATACCATGAAATGCAAATGCC
TGATCAGTTTCGAGAGCAAATAGAAAAAGAGCATCAGCGACAAGCCAAAG
ATAACCAACGCTTCATCGATGATATTTCAGATGGAAAAGACGTATTTAAG
ACGATAAATGAGTCTATGAGTAAAACTGCTGATTATCTTCCTGCAGACCA
AAAGGAAGAGTTCGTAGATGATGTGAATCGTGCTACAGTTCAAACTTCAA
AAGCGGCAAAGGATATAAAAAGGATTAGGGAAACTGAACATGAAACGTTT
ATGAACCATCTTCACCAAGCAACGCATGGTCAACTGAATTCG Coding sequence (CDS) from alignment at sc0000339_pilon:318211..319902+ >XLOC_004942 ID=XLOC_004942|Name=XLOC_004942|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3384bp|location=Sequence derived from alignment at sc0000339_pilon:318211..319902+ (Clytia hemisphaerica_ch_hm2_pilon)
AACGCAAGCACAATGGCTACGTCCAATGACAATACATCTTATATTGATGA
AATGTATAAGTATGATTGCAAGCAACGAGAACCGTTCAGTAATGATAAAA
AGATAAGCCAAAATGATGGTGCTTTTATGACAGGAAGCGCAGCCGAAGGT
GCGTTCATTTGTCGTGGTGTCTATGAAATAGTTACCAACATTGAAATGGA
TATCATGGAACCTTTTGCTAAAATCCCTGCCAATCAAAAGAACAATGTTT
TAGAATCAACTAACGTTATCGGATATTATCGTGTGAAATGGAATGAAGAG
TTGAGAGGATGTTTACAACAAGATTTCCATCAATCTTTATTATTGCTGGA
TAATAATTATAATCCGGAATATCTAGATGGTGAAAGCATTGATATCAATG
GACGGGCCCTTTCGAATAACGATGGTGACGAAAGCACTGAATTAGGATAT
AAACATAACAAAGGGACACCGAACCTTTTCTCAGATGTGAATTTTGTGGT
TCACATCGAAATTGATCATATAAAGTGCATTGAACTTGACTTTTGGCCGG
ACTTTTTGCATCCTTGGTTTGAACGGGAACGTTATTGGCCATCCCCTGAA
ATCGTCAAAGAAATTGACGACAATAAATGTCATTTGGTTTTGAAATCAAC
ACCTGGATCCAACAGAAATGACGAgtggagaatttctttttccaaagctg
aagtcattttagctaaaagaaaatctcattttcaaaataagtgTTATTTA
TTGGCCAAATTTATGTATTATGCAAACCTTAAACAAATAGATGATCCAGA
GACAGGCCGGCATATTTCTTCGTATCTCCTTAAAACAACAATGTTGCACA
TGTTGGAACAAACTCCACCAGAACACTGGAAAGATTGGGAAGAGAGAAAA
AGTTATTGTCAAGTTGTCATCATGTTGTATGAGCGCCTTGCTGAAAGTTT
ATCCAAAGGATATCTACCATCTTACTTTGTTGACGAGATCAATTTACTTG
AAGGATATCCTAAAAGATATCTCAAGAAAATGGGTGAATTGGCTTTGGAG
CTTTGTAAATTCTGGTCGACGTTAGAAGGTGAGGATAACTTTCATTGCAC
TATCAAAAGATTATACAGCGATATAAAGAATAAGATGGAGACGCCAGATG
CACAAGCCAAAGTAGAAGGTGATATTAAATCTCACATGGAAAAGGCACTC
GGAAATATTGAAAACAatcccaaaacaaaacaagccTTCAGAATAGCTGC
TAATGGGCTACTGGAGGATATTAATGTTCTTAAATCGCGTTCTAATATTG
ATGGTTTGACTACTAGTATTGATGCATTAAAACTTAGTGAACAGTTTAGG
ACAAGGCTCAATGGAGAATTAGGTACCGAATACCATGAAATGCAAATGCC
TGATCAGTTTCGAGAGCAAATAGAAAAAGAGCATCAGCGACAAGCCAAAG
ATAACCAACGCTTCATCGATGATATTTCAGATGGAAAAGACGTATTTAAG
ACGATAAATGAGTCTATGAGTAAAACTGCTGATTATCTTCCTGCAGACCA
AAAGGAAGAGTTCGTAGATGATGTGAATCGTGCTACAGTTCAAACTTCAA
AAGCGGCAAAGGATATAAAAAGGATTAGGGAAACTGAACATGAAACGTTT
ATGAACCATCTTCACCAAGCAACGCATGGTCAACTGAATTCGAACGCAAG
CACAATGGCTACGTCCAATGACAATACATCTTATATTGATGAAATGTATA
AGTATGATTGCAAGCAACGAGAACCGTTCAGTAATGATAAAAAGATAAGC
CAAAATGATGGTGCTTTTATGACAGGAAGCGCAGCCGAAGGTGCGTTCAT
TTGTCGTGGTGTCTATGAAATAGTTACCAACATTGAAATGGATATCATGG
AACCTTTTGCTAAAATCCCTGCCAATCAAAAGAACAATGTTTTAGAATCA
ACTAACGTTATCGGATATTATCGTGTGAAATGGAATGAAGAGTTGAGAGG
ATGTTTACAACAAGATTTCCATCAATCTTTATTATTGCTGGATAATAATT
ATAATCCGGAATATCTAGATGGTGAAAGCATTGATATCAATGGACGGGCC
CTTTCGAATAACGATGGTGACGAAAGCACTGAATTAGGATATAAACATAA
CAAAGGGACACCGAACCTTTTCTCAGATGTGAATTTTGTGGTTCACATCG
AAATTGATCATATAAAGTGCATTGAACTTGACTTTTGGCCGGACTTTTTG
CATCCTTGGTTTGAACGGGAACGTTATTGGCCATCCCCTGAAATCGTCAA
AGAAATTGACGACAATAAATGTCATTTGGTTTTGAAATCAACACCTGGAT
CCAACAGAAATGACGAgtggagaatttctttttccaaagctgaagtcatt
ttagctaaaagaaaatctcattttcaaaataagtgTTATTTATTGGCCAA
ATTTATGTATTATGCAAACCTTAAACAAATAGATGATCCAGAGACAGGCC
GGCATATTTCTTCGTATCTCCTTAAAACAACAATGTTGCACATGTTGGAA
CAAACTCCACCAGAACACTGGAAAGATTGGGAAGAGAGAAAAAGTTATTG
TCAAGTTGTCATCATGTTGTATGAGCGCCTTGCTGAAAGTTTATCCAAAG
GATATCTACCATCTTACTTTGTTGACGAGATCAATTTACTTGAAGGATAT
CCTAAAAGATATCTCAAGAAAATGGGTGAATTGGCTTTGGAGCTTTGTAA
ATTCTGGTCGACGTTAGAAGGTGAGGATAACTTTCATTGCACTATCAAAA
GATTATACAGCGATATAAAGAATAAGATGGAGACGCCAGATGCACAAGCC
AAAGTAGAAGGTGATATTAAATCTCACATGGAAAAGGCACTCGGAAATAT
TGAAAACAatcccaaaacaaaacaagccTTCAGAATAGCTGCTAATGGGC
TACTGGAGGATATTAATGTTCTTAAATCGCGTTCTAATATTGATGGTTTG
ACTACTAGTATTGATGCATTAAAACTTAGTGAACAGTTTAGGACAAGGCT
CAATGGAGAATTAGGTACCGAATACCATGAAATGCAAATGCCTGATCAGT
TTCGAGAGCAAATAGAAAAAGAGCATCAGCGACAAGCCAAAGATAACCAA
CGCTTCATCGATGATATTTCAGATGGAAAAGACGTATTTAAGACGATAAA
TGAGTCTATGAGTAAAACTGCTGATTATCTTCCTGCAGACCAAAAGGAAG
AGTTCGTAGATGATGTGAATCGTGCTACAGTTCAAACTTCAAAAGCGGCA
AAGGATATAAAAAGGATTAGGGAAACTGAACATGAAACGTTTATGAACCA
TCTTCACCAAGCAACGCATGGTCAACTGAATTCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000339_pilon | genome | sc0000339_pilon:318211..319902 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1692:1 |
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