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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000339_pilon:231798..233987+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004938 ID=XLOC_004938|Name=XLOC_004938|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2190bp|location=Sequence derived from alignment at sc0000339_pilon:231798..233987+ (Clytia hemisphaerica_ch_hm2_pilon)
AtgtttttcaagacttttttatttttgttgacaATACCAACGATAATATG
TGCTTTGGACGTTATCGGGATTTATAGTGCTTGTGAAAACCATCCTGAGC
TTGTAAGTAACTTTACAAAACAAGGAGCTATTTACAATCGAGCTGTCACG
AAATTCTATACATTTAGCCAAAGAATGAATTATATTGGGCTAGATATGTG
TTATAACGAGACAGTGTTGTTGAACTTTCTGATCGATAAAGTGCTGGCTA
ATACTTCTTATCTTGAAATAGGGAATGACTCTACTCCTTATAAACATGTC
AAAATTGATACGGTTATTTTACATGTACCTTTGCATATGTTCAAAATTAC
TCAAGACATTTTGAGCACTACAGATATCATTGTCGTCAAATTCACCAGAG
ATATTATATTACCGACAAACTATGCTGATAGACTTGGTTTCGATGTTATT
TTCAACttgatgaaaattgaaaaagttattCGTGAATATTggaatgaaat
tattttgattgatCTTCGATCTAGTGGAACATCATTATCTATGCAAGAAT
TgatatcaaatttcaaaaaggaaaaagataTTTGCTACAAAGCTATAGGA
ATAGAATCTTCGAATGATTCACATTTAAACCGTCTAGACCAGCTTCTTCA
TgtggagaaaaacaaaagattagCAACCTTCTTTTTCCAAACGAAGTCCG
AAGATTTTCAAATACCATCATTTTTCCTGGACTACTCAAACAAATCAATA
ATTATTGGTTCTGTTGATGTTTTGGTTAAAAACGAAACATTGCCAGGAAA
TATCGTCAGAGCTCCTTTCTTCAATATCTTTCGAATGTTAACACAGTTTG
acgttcttcattttttctttagcaATGACCCAGAGTACCAGAAATATAGG
TTTGAGATCAGTAGCATAGTTGCCTACtttttttATGCGCTCAATATATT
CAAACGCCCTCCTTCAATGTCGCACCAAGAATACAGAGCAATTTTGAAAT
CCAATCTCACTAGAACAAAAGAGGGAGACTTCTTAGGATTTAAACCAGTC
AATGAGAATCGAACCAATGAATCTTTGACAAATAATTGTACAGACATCGT
ATGTCAACCAGGATTCAGAAAAGTTTTTGGAGTTGTCCCTTCGTCTTTAT
GGGATGAGGAAGTCGGATATTTTTGTCAACCCTGTCCTATGGATGAATTC
AAATCGACCTACGGTGACGGTCCTTGTCAATCATGTCATGGATTCTACGT
CCCTAGCGCTGATCGAACGTCTTGTATAAATCCATTGAAATCTGTTTATT
TGAAAGCTGAAAGGCGAATCGGTGCTATCCTAATTGCTTTGTGTATCATG
GGAGCCATTTTCCCATTGTCCACTTTATGTGTCTTCCTGAAGAATCGAAA
ATCACCTATTGTTATGCTCTCAGACTCAAAGTTATCGTTACTTCACCTCT
GTTTCCTAGCAACCACTTCTATCGTGTTGCCATTGGTTTATTTCGACCAA
CCAACTGAAGCCAAATGTATAACTCGTCTTGGAATCATAGTTTTGCTTTA
TAATAATAGTATCAgctttattttcatcaaatgtATGAAACTTTTAAATG
CTTTCTCCAGCGATATACGAACTACTGGTCGAGATGTACAGAGAACTGCA
ATACAGCAAATCTCGATTTTTATGATCAATACATTTCTTGGATTAGGTAT
TTTAGTATTattgatgtatcaaaagttacCAGAGGTCGTAACTTCGATAA
ACATCGAAAGAAAGGAACAAATATTTTACTGCGACAGCAATTTGCACTTC
AGTGTATTGATAGCATACaccatttgtttacatttagcaTGCAGTTACCG
AGCTTACCAATATCGTCACTTGCCAGGATATCTGAGTGAAGCAACCAGTA
TTGCAATCGGTTCATTTGCTGCCACAATCTCCTTCACCGTAATGTATCCT
ATCAGTCATTTCCAAAAGAATCAACTTGATGTCTCAGTCGTGCAAATTTT
ATTTGTGGCTGGGAATAATTTgttgatttatttattcatgTATGGCTATA
AGATGTATCTGATCATCTTTCGGCCgagaaaaaacacgaaatatTATGCC
AGGAAACTTCAGATTCAAGCAGTGAAGGAGCGGACTGGCCGAACAACATC
TTTTCTGGTCATTGATGCGAGTACCAGGCACTCGAGGTAA Coding sequence (CDS) from alignment at sc0000339_pilon:231798..233987+ >XLOC_004938 ID=XLOC_004938|Name=XLOC_004938|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4380bp|location=Sequence derived from alignment at sc0000339_pilon:231798..233987+ (Clytia hemisphaerica_ch_hm2_pilon)
AtgtttttcaagacttttttatttttgttgacaATACCAACGATAATATG
TGCTTTGGACGTTATCGGGATTTATAGTGCTTGTGAAAACCATCCTGAGC
TTGTAAGTAACTTTACAAAACAAGGAGCTATTTACAATCGAGCTGTCACG
AAATTCTATACATTTAGCCAAAGAATGAATTATATTGGGCTAGATATGTG
TTATAACGAGACAGTGTTGTTGAACTTTCTGATCGATAAAGTGCTGGCTA
ATACTTCTTATCTTGAAATAGGGAATGACTCTACTCCTTATAAACATGTC
AAAATTGATACGGTTATTTTACATGTACCTTTGCATATGTTCAAAATTAC
TCAAGACATTTTGAGCACTACAGATATCATTGTCGTCAAATTCACCAGAG
ATATTATATTACCGACAAACTATGCTGATAGACTTGGTTTCGATGTTATT
TTCAACttgatgaaaattgaaaaagttattCGTGAATATTggaatgaaat
tattttgattgatCTTCGATCTAGTGGAACATCATTATCTATGCAAGAAT
TgatatcaaatttcaaaaaggaaaaagataTTTGCTACAAAGCTATAGGA
ATAGAATCTTCGAATGATTCACATTTAAACCGTCTAGACCAGCTTCTTCA
TgtggagaaaaacaaaagattagCAACCTTCTTTTTCCAAACGAAGTCCG
AAGATTTTCAAATACCATCATTTTTCCTGGACTACTCAAACAAATCAATA
ATTATTGGTTCTGTTGATGTTTTGGTTAAAAACGAAACATTGCCAGGAAA
TATCGTCAGAGCTCCTTTCTTCAATATCTTTCGAATGTTAACACAGTTTG
acgttcttcattttttctttagcaATGACCCAGAGTACCAGAAATATAGG
TTTGAGATCAGTAGCATAGTTGCCTACtttttttATGCGCTCAATATATT
CAAACGCCCTCCTTCAATGTCGCACCAAGAATACAGAGCAATTTTGAAAT
CCAATCTCACTAGAACAAAAGAGGGAGACTTCTTAGGATTTAAACCAGTC
AATGAGAATCGAACCAATGAATCTTTGACAAATAATTGTACAGACATCGT
ATGTCAACCAGGATTCAGAAAAGTTTTTGGAGTTGTCCCTTCGTCTTTAT
GGGATGAGGAAGTCGGATATTTTTGTCAACCCTGTCCTATGGATGAATTC
AAATCGACCTACGGTGACGGTCCTTGTCAATCATGTCATGGATTCTACGT
CCCTAGCGCTGATCGAACGTCTTGTATAAATCCATTGAAATCTGTTTATT
TGAAAGCTGAAAGGCGAATCGGTGCTATCCTAATTGCTTTGTGTATCATG
GGAGCCATTTTCCCATTGTCCACTTTATGTGTCTTCCTGAAGAATCGAAA
ATCACCTATTGTTATGCTCTCAGACTCAAAGTTATCGTTACTTCACCTCT
GTTTCCTAGCAACCACTTCTATCGTGTTGCCATTGGTTTATTTCGACCAA
CCAACTGAAGCCAAATGTATAACTCGTCTTGGAATCATAGTTTTGCTTTA
TAATAATAGTATCAgctttattttcatcaaatgtATGAAACTTTTAAATG
CTTTCTCCAGCGATATACGAACTACTGGTCGAGATGTACAGAGAACTGCA
ATACAGCAAATCTCGATTTTTATGATCAATACATTTCTTGGATTAGGTAT
TTTAGTATTattgatgtatcaaaagttacCAGAGGTCGTAACTTCGATAA
ACATCGAAAGAAAGGAACAAATATTTTACTGCGACAGCAATTTGCACTTC
AGTGTATTGATAGCATACaccatttgtttacatttagcaTGCAGTTACCG
AGCTTACCAATATCGTCACTTGCCAGGATATCTGAGTGAAGCAACCAGTA
TTGCAATCGGTTCATTTGCTGCCACAATCTCCTTCACCGTAATGTATCCT
ATCAGTCATTTCCAAAAGAATCAACTTGATGTCTCAGTCGTGCAAATTTT
ATTTGTGGCTGGGAATAATTTgttgatttatttattcatgTATGGCTATA
AGATGTATCTGATCATCTTTCGGCCgagaaaaaacacgaaatatTATGCC
AGGAAACTTCAGATTCAAGCAGTGAAGGAGCGGACTGGCCGAACAACATC
TTTTCTGGTCATTGATGCGAGTACCAGGCACTCGAGGTAAAtgtttttca
agacttttttatttttgttgacaATACCAACGATAATATGTGCTTTGGAC
GTTATCGGGATTTATAGTGCTTGTGAAAACCATCCTGAGCTTGTAAGTAA
CTTTACAAAACAAGGAGCTATTTACAATCGAGCTGTCACGAAATTCTATA
CATTTAGCCAAAGAATGAATTATATTGGGCTAGATATGTGTTATAACGAG
ACAGTGTTGTTGAACTTTCTGATCGATAAAGTGCTGGCTAATACTTCTTA
TCTTGAAATAGGGAATGACTCTACTCCTTATAAACATGTCAAAATTGATA
CGGTTATTTTACATGTACCTTTGCATATGTTCAAAATTACTCAAGACATT
TTGAGCACTACAGATATCATTGTCGTCAAATTCACCAGAGATATTATATT
ACCGACAAACTATGCTGATAGACTTGGTTTCGATGTTATTTTCAACttga
tgaaaattgaaaaagttattCGTGAATATTggaatgaaattattttgatt
gatCTTCGATCTAGTGGAACATCATTATCTATGCAAGAATTgatatcaaa
tttcaaaaaggaaaaagataTTTGCTACAAAGCTATAGGAATAGAATCTT
CGAATGATTCACATTTAAACCGTCTAGACCAGCTTCTTCATgtggagaaa
aacaaaagattagCAACCTTCTTTTTCCAAACGAAGTCCGAAGATTTTCA
AATACCATCATTTTTCCTGGACTACTCAAACAAATCAATAATTATTGGTT
CTGTTGATGTTTTGGTTAAAAACGAAACATTGCCAGGAAATATCGTCAGA
GCTCCTTTCTTCAATATCTTTCGAATGTTAACACAGTTTGacgttcttca
ttttttctttagcaATGACCCAGAGTACCAGAAATATAGGTTTGAGATCA
GTAGCATAGTTGCCTACtttttttATGCGCTCAATATATTCAAACGCCCT
CCTTCAATGTCGCACCAAGAATACAGAGCAATTTTGAAATCCAATCTCAC
TAGAACAAAAGAGGGAGACTTCTTAGGATTTAAACCAGTCAATGAGAATC
GAACCAATGAATCTTTGACAAATAATTGTACAGACATCGTATGTCAACCA
GGATTCAGAAAAGTTTTTGGAGTTGTCCCTTCGTCTTTATGGGATGAGGA
AGTCGGATATTTTTGTCAACCCTGTCCTATGGATGAATTCAAATCGACCT
ACGGTGACGGTCCTTGTCAATCATGTCATGGATTCTACGTCCCTAGCGCT
GATCGAACGTCTTGTATAAATCCATTGAAATCTGTTTATTTGAAAGCTGA
AAGGCGAATCGGTGCTATCCTAATTGCTTTGTGTATCATGGGAGCCATTT
TCCCATTGTCCACTTTATGTGTCTTCCTGAAGAATCGAAAATCACCTATT
GTTATGCTCTCAGACTCAAAGTTATCGTTACTTCACCTCTGTTTCCTAGC
AACCACTTCTATCGTGTTGCCATTGGTTTATTTCGACCAACCAACTGAAG
CCAAATGTATAACTCGTCTTGGAATCATAGTTTTGCTTTATAATAATAGT
ATCAgctttattttcatcaaatgtATGAAACTTTTAAATGCTTTCTCCAG
CGATATACGAACTACTGGTCGAGATGTACAGAGAACTGCAATACAGCAAA
TCTCGATTTTTATGATCAATACATTTCTTGGATTAGGTATTTTAGTATTa
ttgatgtatcaaaagttacCAGAGGTCGTAACTTCGATAAACATCGAAAG
AAAGGAACAAATATTTTACTGCGACAGCAATTTGCACTTCAGTGTATTGA
TAGCATACaccatttgtttacatttagcaTGCAGTTACCGAGCTTACCAA
TATCGTCACTTGCCAGGATATCTGAGTGAAGCAACCAGTATTGCAATCGG
TTCATTTGCTGCCACAATCTCCTTCACCGTAATGTATCCTATCAGTCATT
TCCAAAAGAATCAACTTGATGTCTCAGTCGTGCAAATTTTATTTGTGGCT
GGGAATAATTTgttgatttatttattcatgTATGGCTATAAGATGTATCT
GATCATCTTTCGGCCgagaaaaaacacgaaatatTATGCCAGGAAACTTC
AGATTCAAGCAGTGAAGGAGCGGACTGGCCGAACAACATCTTTTCTGGTC
ATTGATGCGAGTACCAGGCACTCGAGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000339_pilon | genome | sc0000339_pilon:231798..233987 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2190:1 |
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