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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000339_pilon:244794..249893- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004912 ID=XLOC_004912|Name=XLOC_004912|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5100bp|location=Sequence derived from alignment at sc0000339_pilon:244794..249893- (Clytia hemisphaerica_ch_hm2_pilon)
AAGTGTTTATTTCTTATCATTTGCTGCTTGGTGTTGTTAGAAGCCTGCGT
CGATTCACCGGGTAAAGATTGTTGGGAAGGTATGCGAAAGCGTAGCCCGC
CACGTCACTCAAGATGTTGCCGTCTTTCAAGACGATATAAGACATTATTC
AAGCGACGTGATCGACAGAAACGACAATGTCAACGTGTCGTTGTCGCTCT
TAATAGCAAAGTTGACGGGCTGAAAGAAGCCTTAAATGACCAACAGATTG
TCGTTCGTGTTATTCCTGCAGACACTCAGCAACCGACTGTCGGACAGCTT
GTAGAAATTCGAGATCGCACGGTCGCTCTTCTAAACAATGCTCAGTTTAG
AAATAGAACTACTTCGATACCACCTTTAACGACAACAACAACGACTTCAC
AAACGACACGACGGACTAAATATCCGACAACAACGACAACGACTTTAAAA
ACGACAAGACCAACCAAATATCCAACAACAACAACTACGACGCAGAAGAA
TACACGATATCCAACGACAACAACTCGAACGACGCCGACTCTACCGTCAC
CTTCGGATCTTTGGTATTCAGTACCCAAGTATAAACTAATGGACGATACT
GATTCATATATAGACAGTAGTGACGAGTTTATTAAAGAACTTTTTGAGGG
TGAAGAACAAACTTCTGATGAAGAAGAAAATGAAGAGGAAGATTTCAATG
AAGATGATGAACGAAAAAGAAGACGAAGAATGACTCAGAGTAAGTTGAAT
TTTATTTATTCCCTTTAATAATGTTTTTACATTCTGAGGGGTTCGGAGGG
GTTGAATTTGGTACAATCTTTTTCTCGAGTGATTTACCCTTCGCCATACT
CTTCTTATCGATTAATCTTTTAAGCATTTTCTCTATTTTGTCTGAAACTG
ATGTTATAAAATAAACCAAAGTGTCCTTATTTTGACATATCCGGATTCAT
TTTCATGCCTCTTTTGAAACCAACTTTTCTTTCTGTTGATGCGTGAGTAT
TCTCACAGAGAATTATGAATAAAATGAAAGAATATAATTATAATCGTAGA
CCTTCTACAAAACCGCACGAATCCGTTAATGGATATCAGGAGCCTAGAAC
GGAACAGTATTGTCTTTGTCTCATAACCATTAACAACGGATTTTTATTCT
AAATGCAACAGTCTCCTCTCTACATCAACTATGTCTACTCAGGTCAAAGT
TAGATTTCAATGTTTGTTTTCGAAATCGTAACACAGTAAAGCAAGAAATC
CCTCACAATTTTCACATCCTCTAATATTCAAAGGTTCGGCTTCCTATCTT
CCTTTTTAGTACCATCTCGTTTGATTGCTTAGAATGGTTGTTTTTGAATT
CTTGCTTAAGCTTGTTAATCAAGAAATTAGCATCAAACGCGTCATTCTTC
ATATGAATTGACATTCCTCTACGTGTTTATGTTGTTATACTGAGCTAAGA
ATCTTCCTTTTTGATCACTAGTGAAATGATAAAATAAAGTATTTGCTTTT
TTTTGCTTGAATTTTTGAGTGAATTACCAGAAAAAATCGACAGTGACAGC
ATAGGGCTCTTAATAGTTCAATTAGCGAAATAGTTCAGCTAACTCGATAT
AACTCGCTTTGAAATTTTTCCTGGATTTTTAATTTTGTATTTTTTTTGCG
CCATCAAAAACGCCGTTAATGGAGTTACAATCACATTTCTTACAATCCAA
TTCATCACTGCCTTCACTTTTGAATGTTTTTTCTTTTTTTGATTCTTTGT
AAAAACTATTCTTTGTCAACAGAATGCAATTCTTAAGTTTCTTCCCTGAT
AGGCTTTCCACAGGATTTCTGCAAAGGGTTATATGTGATGGGATTCTATT
TACAGATAACTTTGGAAATCAGAGAGTTTGAACTAGGAAGGATCACTTTA
ATCCTCAACACAAGCTAAAAGATGATACGTTGTCATGGGCTAGATTAGGT
TACCAACGAGAAAGATTATCTGAAGTAAATCTAGCCTGGATACCCAGACT
CAGTGATATCATCGCATCTGTTAAGAATTAGCCGATCTAGGTACACCAGG
AAAGATATAGAATACTGTAAGCAAGTTTATTGAAAGAGAGTTTAATTTTA
CGCCTGGGCTGTCAATTATTTTCAGTTTTACGCAACACTATTCCCTCTTC
AGTGCAATTAATCAATCAAAACCCAGGATGAGTAAAAGAAACTAGATCTT
TAGACCCAAGCATATGTCTACAATCATGGTCGTAATATTTGAGAAAATAG
GGAAATTCACCGGGAAGTTTTTAAACCACAATCGATTTGTAAATTCTCTA
AAGTAGGTTGGAAGGGTAGAGTTTTAACTCTAAGTTTTAACATGAGACCT
AATATCCAAAAGTTCAAAAATGGTCCAATAAGGCTCATAATATAGCCTGG
AAGTCTATAAACCCGAGCTAAATTGAAATATCCGATTAAATTTAAGAGAT
GGCCCAAAATCGACTTTCTCGCCCGAACTCCAAATTTCGAAAAACGAAGA
AATAAGCTTAATTCTCAAAAGATTTCGACCATGATTGTACTCTAAATTCG
CTCTTTTAGGAGATTGACTAATTAAGGCAGTACTTCGCAAGTTACGAAAC
TAGCAAAAATGCTCATTTGTTTCCTTGTCATTAGCTATCCAATTCATCAA
CTTAATTCTTATAATAGTAGCTAAATGATCAATCTATTGCCAACATAATT
GTCTAATTGATTTGTTAGCGAAAATAATATTTGAATGCCAATTTACCACA
CCTTTGATCGACGATGAGGAAATTGCTTTATCCTTCCGTTCAACGATGTT
TTCGTAGTCGTTATTTGATTGCTCAATCTTTTTTCACTTAATTAACGTGG
AAACTTTCATCTAACGAGAAGCAGTTACATAAAGAAGAGACCTTTTAATC
GAACTAAGCCTAGTTAGCCCCTTTAGCTCACCTTTCTATGATAACCCTTA
TTTAAGGTTGCAGCATCATTTCCCATAACGATTTATCGCACCCATCAGTA
AAATCAAAAAAGTTGTACATAGGGGTCTAGGTACGAGATTGCTTACAAGT
GATAAAGTGAATGCAATGCTACCAGTTAAAATCACCAACAATAGAGTGAT
GGTTCTGAGAAGTTTTTACAATCCAGCGTTGATCCATTAACGAGTTAATG
TATTTGAACTTTTGAGGACGCCGGAGTGACTGAAGCGATTTGGAATAACC
CGTAGTTCTGACACGCAAAATCGAGGACGGTAAAAGTGCTGATTTACCGC
CGTCCTCGGCTGGTTAGGATCTAGTCAAATTAGAACCTTATCGGCCCCGT
CACAGAAAAACACACATACATAAACTCGGTACTGTACCCGAAGAAGGTGG
CATGAAATTTCGCCTGGAAAATATATAAACAATGTCTTATAATTTGAAAA
AGGTGCATCACCTAACATTATCCAATTTCTATGCGGAACTTGAAGAAACC
TCACTGGAATACAAAACATGATTCATCATTTCATAACATCGGATCAATAT
TAATGTTCCCTTGACTCGACAAGGAAGCTCCTTTATTTCCAAATTGAATC
AAACCACAATTTATTTCTGTAATAAATTCACCAGCAAATGTAACCCACAA
TGCGGTGATGTGAAAAGTTATAAAAAGTAAAAATGTTTGTCTGAAAATTC
TTGATTCAGACAAACATTTTTACTTTTTATAACTTTTCACATCACCGCAT
TGTGGGTTACATTTGCTGGTGAATTTATGTATGTTTTTGCACTTTTGAGG
ACGTCAGAGTGACTGGAGTGGTTTGGAATAGCCCGCAGTTTTGACCCGCA
AAATCAAGGACGGTAAAAGTGCTGATTTACCGCTGTCCTCAGTTAGTCAA
GATATAGACAGGCTTCCCAAAGTGCCATAATCTGCTCAAATTCGGTAAGC
TTTCTCTGCACTGTACGGACCCCTATTTTACCGCGCATAGCGTCGTTTTC
AAATACATTGCCCCCCTCCCGGAGTAAGAACAAAACAAATTTTTTGTACC
TTTGAGTGAAAGTACTATTTAATCCCCCAATGAATTATTTTTTTATTCCA
GCATCAAGACGAACTTGTCCGACACCTCGACAATCTTTATACACCATACC
CAACCTACCTCCTGGCACAACATCCACTTTCTTGAGCACTAGAGAATCTC
TTGATGCCATTGGTAGCATATTGGTCAGATCGTGTGCTGAATGTCATTAT
CAAATCAATTTACCTGATGGGTGAGTATTTTGAAAGTGACATTGACAATA
AGACCATATTCACACGTTACTGTTCCGTTTCGCTCCGGTATGATTCTCGT
TACGGATTGAGTTTGTTCATATTAGTTTCGGAACGTTTCGGAGCAAGAAA
ACGGAGTAGTTCCGTTCCGATGAAAAAAGTGGAGCGAAAACGTTTCGATC
TGTTTTGCTTTGTAACATTATATTCTGACGTTTCAAATTTTGACGTTCAC
ACTTGTTTCGAAACCGTTTTGGAACGGAGCAGAACAGAACCGTCTGAACG
TCTGAACACGGTCACTTTATTCTTGTGAACCTGGACATTTCCAAATGTTT
GAGACGGAGTAGATCCAACGGAGTTCTAATCAAAGATGGCAACGTGTCAT
TGTATCAATTTAATCAACTAAACCTTTCCGGGGTTTTTAGCTAGCAAATC
TATTTGATCTTTTTAATGATAGCGACAGTCACTATTACTGTTAACTATGA
CAGTTACTGCTACTGCAGCTTCAAGTCCTGAATGACTGAGAGCAAAGCTT
AAGAATGAATTATGGTGCGTTCAAGCCAATGATAAAAACTAAGCAATTGT
TAAAAAATCATTGATTAAGAACAGATTAGATTCAACTTATCATAATATGT
ATTGTATATTGTTTTCGCTTTTAGTTATTACCCACGTGAGCACCGTCACG
TGATTTGTCCGCCAGCTAAAGTCAATTGTTTTGCCGGTATCGGAAAGTGC
GCTAAGAATGAAGTACTGATGACAATTTTCAAAGATACGGATAACGATTC
AACAAGATTCGATTGGGACAGTAAAGTGAATATCATTTTCAACAAAGGAT
GTGGATGTCAAATGCTGGCTGATTACTCATTTATTGGAGATGGGAATTAA
Coding sequence (CDS) from alignment at sc0000339_pilon:244794..249893- >XLOC_004912 ID=XLOC_004912|Name=XLOC_004912|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2268bp|location=Sequence derived from alignment at sc0000339_pilon:244794..249893- (Clytia hemisphaerica_ch_hm2_pilon)
AAGTGTTTATTTCTTATCATTTGCTGCTTGGTGTTGTTAGAAGCCTGCGT
CGATTCACCGGGTAAAGATTGTTGGGAAGGTATGCGAAAGCGTAGCCCGC
CACGTCACTCAAGATGTTGCCGTCTTTCAAGACGATATAAGACATTATTC
AAGCGACGTGATCGACAGAAACGACAATGTCAACGTGTCGTTGTCGCTCT
TAATAGCAAAGTTGACGGGCTGAAAGAAGCCTTAAATGACCAACAGATTG
TCGTTCGTGTTATTCCTGCAGACACTCAGCAACCGACTGTCGGACAGCTT
GTAGAAATTCGAGATCGCACGGTCGCTCTTCTAAACAATGCTCAGTTTAG
AAATAGAACTACTTCGATACCACCTTTAACGACAACAACAACGACTTCAC
AAACGACACGACGGACTAAATATCCGACAACAACGACAACGACTTTAAAA
ACGACAAGACCAACCAAATATCCAACAACAACAACTACGACGCAGAAGAA
TACACGATATCCAACGACAACAACTCGAACGACGCCGACTCTACCGTCAC
CTTCGGATCTTTGGTATTCAGTACCCAAGTATAAACTAATGGACGATACT
GATTCATATATAGACAGTAGTGACGAGTTTATTAAAGAACTTTTTGAGGG
TGAAGAACAAACTTCTGATGAAGAAGAAAATGAAGAGGAAGATTTCAATG
AAGATGATGAACGAAAAAGAAGACGAAGAATGACTCAGAAAGTGTTTATT
TCTTATCATTTGCTGCTTGGTGTTGTTAGAAGCCTGCGTCGATTCACCGG
GTAAAGATTGTTGGGAAGGTATGCGAAAGCGTAGCCCGCCACGTCACTCA
AGATGTTGCCGTCTTTCAAGACGATATAAGACATTATTCAAGCGACGTGA
TCGACAGAAACGACAATGTCAACGTGTCGTTGTCGCTCTTAATAGCAAAG
TTGACGGGCTGAAAGAAGCCTTAAATGACCAACAGATTGTCGTTCGTGTT
ATTCCTGCAGACACTCAGCAACCGACTGTCGGACAGCTTGTAGAAATTCG
AGATCGCACGGTCGCTCTTCTAAACAATGCTCAGTTTAGAAATAGAACTA
CTTCGATACCACCTTTAACGACAACAACAACGACTTCACAAACGACACGA
CGGACTAAATATCCGACAACAACGACAACGACTTTAAAAACGACAAGACC
AACCAAATATCCAACAACAACAACTACGACGCAGAAGAATACACGATATC
CAACGACAACAACTCGAACGACGCCGACTCTACCGTCACCTTCGGATCTT
TGGTATTCAGTACCCAAGTATAAACTAATGGACGATACTGATTCATATAT
AGACAGTAGTGACGAGTTTATTAAAGAACTTTTTGAGGGTGAAGAACAAA
CTTCTGATGAAGAAGAAAATGAAGAGGAAGATTTCAATGAAGATGATGAA
CGAAAAAGAAGACGAAGAATGACTCAGACATCAAGACGAACTTGTCCGAC
ACCTCGACAATCTTTATACACCATACCCAACCTACCTCCTGGCACAACAT
CCACTTTCTTGAGCACTAGAGAATCTCTTGATGCCATTGGTAGCATATTG
GTCAGATCGTGTGCTGAATGTCATTATCAAATCAATTTACCTGATGGCAT
CAAGACGAACTTGTCCGACACCTCGACAATCTTTATACACCATACCCAAC
CTACCTCCTGGCACAACATCCACTTTCTTGAGCACTAGAGAATCTCTTGA
TGCCATTGGTAGCATATTGGTCAGATCGTGTGCTGAATGTCATTATCAAA
TCAATTTACCTGATGGTTATTACCCACGTGAGCACCGTCACGTGATTTGT
CCGCCAGCTAAAGTCAATTGTTTTGCCGGTATCGGAAAGTGCGCTAAGAA
TGAAGTACTGATGACAATTTTCAAAGATACGGATAACGATTCAACAAGAT
TCGATTGGGACAGTAAAGTGAATATCATTTTCAACAAAGGATGTGGATGT
CAAATGCTGGCTGATTACTCATTTATTGGAGATGGGAATTAATTATTACC
CACGTGAGCACCGTCACGTGATTTGTCCGCCAGCTAAAGTCAATTGTTTT
GCCGGTATCGGAAAGTGCGCTAAGAATGAAGTACTGATGACAATTTTCAA
AGATACGGATAACGATTCAACAAGATTCGATTGGGACAGTAAAGTGAATA
TCATTTTCAACAAAGGATGTGGATGTCAAATGCTGGCTGATTACTCATTT
ATTGGAGATGGGAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000339_pilon | genome | sc0000339_pilon:244794..249893 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 925-1149:226 |
| Aaloc | 757-921:1048 |
| Aaloc | 16-753:5101 |
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