|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000339_pilon:305192..307570+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004891 ID=XLOC_004891|Name=XLOC_004891|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2379bp|location=Sequence derived from alignment at sc0000339_pilon:305192..307570+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCCGTAAATTACAAATGGTGTCGATAGCTGGAGTGTTTGGATTTTT
ATTTATTCTCTATTACATTTCCAACCACAAAGTACTTTTGAATAATGATA
AAGACCACTCTTTGGTCAACCAACAGGTATTTGATACCATTAAAAGTAAT
AAGGAAATTGATTTAGAAATAGGTAAAAAGACTACAGCAGAGTCTAGAAC
TTTTCCAGTGGAAATAACAAGACCTGAAAGAGCTGTTCAACAAGTACAAA
TAAACACTAATAATCAGAAAACAGCTCAGGGAATAAAGTACAAAGAAAAT
CTCTACATTCCTTTTTCATTCTTGGAAGAATACTATGGTCATTTTGGACA
ATATGTGTCAAGCAATTCCTTTAAATGGTATCATGTCAACCCTGCATATG
TCGATCCAGAAACAGTCTATCCAAAGTACAATTACAAAGTAGAATATCTG
TCATTTCATACTTCCAATGTTCCAAAACGTGCTCGTGTAAAGTGTATATG
TGCAAAGTATGAAGTACCAATCACAACACAATGGGACCCGAAGGGCTATT
ATTATCCTACACAAATTGCACAGTATGGATTGTCCTTCATATCAAGATAT
TATCTGGAATCAAAATCCATTCTTCAAAAGAAACTCACCTTTCCTGAAGG
TATAATTTTTTTGAATTAATAGCATTGGGCTACAATGTCGAGAAGGCTTT
TTTTGTTGGCCCTTCTCTTGAAGTTTCAAAAATTTCCACAAAAACTTATT
GAAACAACTTTGATTTTAAATTTTTTTTAGAGTTCTCTGAATAAAAAATC
CGACCTCTTGACATGGTTAGAGTAAAATAATTTTCTCAAATAACCTACTT
TTGTTATTGTGAGCATCAATCTAATTGTACTTTAAGTGTCTCTGAACGTA
AGCAATCTTCACTTAAGGCCTTAAAACAATATGTAGGcctagggaaattc
cccattcTTGAAgttcttaagtaaaattttacataGATAATATGTGCAAA
AGCTTAATGATACATAACCCACAGCTTTGGTCTGTTCATTCCTATGGTTT
CAATGCCAGAAAATGTTGAATATGCTCAAACTTTTAATGTAAGTTCTTTC
ACATCAGATAGTGGCAAGTCAACAATCACTTCCGTCCCCAAAGAACTTTT
TGTAATCAAAATCAAGTTCAAGGAAGAGCCACAGAACTTTGAAATTAAAG
TTTTGGGTGACAATGAAGTTCAATACACACTTACATACAAAACAGGTACT
GTGAAAAATTCTCAGAAAAgatgtctttttttattgcaGCAATCTTAGCA
AAGCACTGCACCCCTGATCACAAATTCAAAAATGCTTCAAGAAAGGCTTT
ATTTGATCATATTCCCAACATTTCTGAGATCGTAaatctagatttttttt
caattgacttaaaaatttagtaaaatagTATTTTGCTTTTACTGTAGCTT
AGATTTGATCACCATCATCTAGAagaatcttcttctttttttcagacaAT
TCTCAAATTTTGAGAAGTCAAGATGGAAAGACAATCACACATGGACTTGG
GAAACTAACAAAAAGAACACTTTTGACGAGAGATTTGAGTGTTGATTTAC
TGAAAGGTTTATCTTTTATTGAAGGTGGTAGAAATGGAAAAACAGTTGAC
ATcatgttgaaaaaaattatttcgatTACAATAACAAAGGTTGAAGGAGT
ATCTGAGCTCCTTCTTTTAGATAAAGATTTTGTTAGTTATTTCATGGCAG
CAGCTGATTGGTTTGTTAAGTTTCAAGATGAAAGTGGAGGCTGGAAAGTC
AATGTTAAACGTAAAATTTGTAATAGAATGGAAGCTGCACCAGGGTGGTA
TAGCGCAATGGGTCAAGGTCAAGCTATATCCCTTTTAACGCGTGTTTATT
TACATACTAAGAAAGAGAAATACTTGGATGCAGCTTTGAAAGCAACTTTA
GTTTTCCATAGAACTTCAACTGAGAATGGTGTCAAAGCAGATTTATTTGG
CTTACCTTGGTATGAAGAATACCCAACACAAGCTCCATCCTATGTCTTGA
ACGGTTTCATGTTTTCATTGTTTGGTTTGTATGATTTATGGAAAGTTGCC
GGTGATTCACGTGGAGGTACTGCTCAACATTTATTCAATGATGGTTTTAC
AACATTAGAAAAAATGATACCTCTTTATGATAACGGTCATGGTACATTTT
ACGATTTACGCCATTTGTCAATACCAGGTATATCCCCTAATCGTGCACGT
TGGCAATATCATAGAGTCCATTTAGAGCAATTGACTGCTCTGTTAAGTAT
TAAAgaaagtaaagttttaaaagaagtatTACAACGTTGGACTGGTTATG
TTTCTGGTATCCTATCTCGACACAATTGA Coding sequence (CDS) from alignment at sc0000339_pilon:305192..307570+ >XLOC_004891 ID=XLOC_004891|Name=XLOC_004891|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3342bp|location=Sequence derived from alignment at sc0000339_pilon:305192..307570+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCCGTAAATTACAAATGGTGTCGATAGCTGGAGTGTTTGGATTTTT
ATTTATTCTCTATTACATTTCCAACCACAAAGTACTTTTGAATAATGATA
AAGACCACTCTTTGGTCAACCAACAGGTATTTGATACCATTAAAAGTAAT
AAGGAAATTGATTTAGAAATAGGTAAAAAGACTACAGCAGAGTCTAGAAC
TTTTCCAGTGGAAATAACAAGACCTGAAAGAGCTGTTCAACAAGTACAAA
TAAACACTAATAATCAGAAAACAGCTCAGGGAATAAAGTACAAAGAAAAT
CTCTACATTCCTTTTTCATTCTTGGAAGAATACTATGGTCATTTTGGACA
ATATGTGTCAAGCAATTCCTTTAAATGGTATCATGTCAACCCTGCATATG
TCGATCCAGAAACAGTCTATCCAAAGTACAATTACAAAGTAGAATATCTG
TCATTTCATACTTCCAATGTTCCAAAACGTGCTCGTGTAAAGTGTATATG
TGCAAAGTATGAAGTACCAATCACAACACAATGGGACCCGAAGGGCTATT
ATTATCCTACACAAATTGCACAGTATGGATTGTCCTTCATATCAAGATAT
TATCTGGAATCAAAATCCATTCTTCAAAAGAAACTCACCTTTCCTGAAGA
TGATCCGTAAATTACAAATGGTGTCGATAGCTGGAGTGTTTGGATTTTTA
TTTATTCTCTATTACATTTCCAACCACAAAGTACTTTTGAATAATGATAA
AGACCACTCTTTGGTCAACCAACAGGTATTTGATACCATTAAAAGTAATA
AGGAAATTGATTTAGAAATAGGTAAAAAGACTACAGCAGAGTCTAGAACT
TTTCCAGTGGAAATAACAAGACCTGAAAGAGCTGTTCAACAAGTACAAAT
AAACACTAATAATCAGAAAACAGCTCAGGGAATAAAGTACAAAGAAAATC
TCTACATTCCTTTTTCATTCTTGGAAGAATACTATGGTCATTTTGGACAA
TATGTGTCAAGCAATTCCTTTAAATGGTATCATGTCAACCCTGCATATGT
CGATCCAGAAACAGTCTATCCAAAGTACAATTACAAAGTAGAATATCTGT
CATTTCATACTTCCAATGTTCCAAAACGTGCTCGTGTAAAGTGTATATGT
GCAAAGTATGAAGTACCAATCACAACACAATGGGACCCGAAGGGCTATTA
TTATCCTACACAAATTGCACAGTATGGATTGTCCTTCATATCAAGATATT
ATCTGGAATCAAAATCCATTCTTCAAAAGAAACTCACCTTTCCTGAAGAT
AGTGGCAAGTCAACAATCACTTCCGTCCCCAAAGAACTTTTTGTAATCAA
AATCAAGTTCAAGGAAGAGCCACAGAACTTTGAAATTAAAGTTTTGGGTG
ACAATGAAGTTCAATACACACTTACATACAAAACAGATAGTGGCAAGTCA
ACAATCACTTCCGTCCCCAAAGAACTTTTTGTAATCAAAATCAAGTTCAA
GGAAGAGCCACAGAACTTTGAAATTAAAGTTTTGGGTGACAATGAAGTTC
AATACACACTTACATACAAAACAGacaATTCTCAAATTTTGAGAAGTCAA
GATGGAAAGACAATCACACATGGACTTGGGAAACTAACAAAAAGAACACT
TTTGACGAGAGATTTGAGTGTTGATTTACTGAAAGGTTTATCTTTTATTG
AAGGTGGTAGAAATGGAAAAACAGTTGACATcatgttgaaaaaaattatt
tcgatTACAATAACAAAGGTTGAAGGAGTATCTGAGCTCCTTCTTTTAGA
TAAAGATTTTGTTAGTTATTTCATGGCAGCAGCTGATTGGTTTGTTAAGT
TTCAAGATGAAAGTGGAGGCTGGAAAGTCAATGTTAAACGTAAAATTTGT
AATAGAATGGAAGCTGCACCAGGGTGGTATAGCGCAATGGGTCAAGGTCA
AGCTATATCCCTTTTAACGCGTGTTTATTTACATACTAAGAAAGAGAAAT
ACTTGGATGCAGCTTTGAAAGCAACTTTAGTTTTCCATAGAACTTCAACT
GAGAATGGTGTCAAAGCAGATTTATTTGGCTTACCTTGGTATGAAGAATA
CCCAACACAAGCTCCATCCTATGTCTTGAACGGTTTCATGTTTTCATTGT
TTGGTTTGTATGATTTATGGAAAGTTGCCGGTGATTCACGTGGAGGTACT
GCTCAACATTTATTCAATGATGGTTTTACAACATTAGAAAAAATGATACC
TCTTTATGATAACGGTCATGGTACATTTTACGATTTACGCCATTTGTCAA
TACCAGGTATATCCCCTAATCGTGCACGTTGGCAATATCATAGAGTCCAT
TTAGAGCAATTGACTGCTCTGTTAAGTATTAAAgaaagtaaagttttaaa
agaagtatTACAACGTTGGACTGGTTATGTTTCTGGTATCCTATCTCGAC
ACAATTGAacaATTCTCAAATTTTGAGAAGTCAAGATGGAAAGACAATCA
CACATGGACTTGGGAAACTAACAAAAAGAACACTTTTGACGAGAGATTTG
AGTGTTGATTTACTGAAAGGTTTATCTTTTATTGAAGGTGGTAGAAATGG
AAAAACAGTTGACATcatgttgaaaaaaattatttcgatTACAATAACAA
AGGTTGAAGGAGTATCTGAGCTCCTTCTTTTAGATAAAGATTTTGTTAGT
TATTTCATGGCAGCAGCTGATTGGTTTGTTAAGTTTCAAGATGAAAGTGG
AGGCTGGAAAGTCAATGTTAAACGTAAAATTTGTAATAGAATGGAAGCTG
CACCAGGGTGGTATAGCGCAATGGGTCAAGGTCAAGCTATATCCCTTTTA
ACGCGTGTTTATTTACATACTAAGAAAGAGAAATACTTGGATGCAGCTTT
GAAAGCAACTTTAGTTTTCCATAGAACTTCAACTGAGAATGGTGTCAAAG
CAGATTTATTTGGCTTACCTTGGTATGAAGAATACCCAACACAAGCTCCA
TCCTATGTCTTGAACGGTTTCATGTTTTCATTGTTTGGTTTGTATGATTT
ATGGAAAGTTGCCGGTGATTCACGTGGAGGTACTGCTCAACATTTATTCA
ATGATGGTTTTACAACATTAGAAAAAATGATACCTCTTTATGATAACGGT
CATGGTACATTTTACGATTTACGCCATTTGTCAATACCAGGTATATCCCC
TAATCGTGCACGTTGGCAATATCATAGAGTCCATTTAGAGCAATTGACTG
CTCTGTTAAGTATTAAAgaaagtaaagttttaaaagaagtatTACAACGT
TGGACTGGTTATGTTTCTGGTATCCTATCTCGACACAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000339_pilon | genome | sc0000339_pilon:305192..307570 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 790-1671:1498 |
| Aaloc | 652-786:1110 |
| Aaloc | 1-648:1 |
|
