|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000265_pilon:433101..434644+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004886 ID=XLOC_004886|Name=XLOC_004886|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1544bp|location=Sequence derived from alignment at sc0000265_pilon:433101..434644+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCGTTTTCAATTGGTTGTATGACTTGCTCTTCGATTGTTGCACG
ATGCATGGATAGAACGCGAAAACTTAAACGACTGACCATCATTTTGTTAA
CAACATCTATTGTTGGGAATATTTTGTACACGATAACTTATTCTGTGTGG
TTTCCGATTTTTGGTCGTTTGTTATGTGGAATGACTAATACAATCAGATC
TTGTTACATGGGTAAGATTACCAACAATGTAACAACTTTTCTTTTCCTAG
CCGTTACTTGTGTCGTTTACTAGCATTTTCATAAATTCGGAATATTTTGA
GTGGATAGTGGATTAAGATAGAAAATGGAGAAGTGAAGGTTTATGCTTTT
TCTTCCCAGAGTATAAATATAGTTCAAAGTGGGCAAACTAGCCTGATAAA
GGGAAAGTGTAACCTTATTTTTTAACTAGAGAGGGCACgaataaatgaat
atttttagatactgCGCATGCCTAGGACGTCGGGCATTTCTTCCGTTTGG
AAGAAAAGGTTAAAAGAAATCTGACATTCATTTCTACTAATTTCAGGAGA
GATTTCAAGAACACATCGTAAAgaagaattgacaaaaataatcacaTTAT
ACGAAATCGTAGGTAATATCGCTTCAGCAATTTCACCTGTCACTCCCGCA
TTATTCGCTTTTATGCATTTCAACATAACAGCTGGGTGGGTGATCCGACA
AGAAAATGCCATCGGTTTGATATTAGCCTGCATGACAACATTATTGCTCG
TATATAGTGTAAtctttttaaaagatctttCTGTAGATCCTGTTTTCCCA
GAAATCCAAAAGAAACATTTTCCTAACCAAATGGTGGCAGCTtcgaacaa
caacaacaacaacgacaacaacgacaacaacaacaacaacaacaacaaca
acgacactCATTTAGAGGACCAAGGCCTTCTCACTTTCCGAGATATACTA
CAAAATGACGGTATAATGGTCTTCCTAACCTACATGTTTGTATCGGCCAC
ACAACATTATCAATTAGACCTTCTAACAAACATGgtagccattatggatt
ttcaatACAGTATATCTCAATATGGCATCATTGCTGCCATAGCAACAGCT
CTCATGTGCGTTTCAATATACTTCAtccaaaaaatgatgacgtcatcatt
agaTACGTATTTTCTATCCATTAACAATCTGGTCTGGATAATTATCGCAC
AAACTTTGGTTTCTTTATCTTTATGGATTAAAAGCTGGGCGTCAAACACT
CTCGGTTTTATTACAGTTGGTTTGGTTGTGCTACTGAACTACTTACATGG
AACCATTACTATAATTTGTGTGAAGcagattttattcaaattaacTCCTT
CACATTCAGCCAGCATTATCGATTCTTATCGTTTCAACTCATTAATTGCT
GCTGTTCTTATAGCCTTCTTTACGGCCAGTTACGTTTTCATGGTCAAAGA
TATGATAATGCCGATCTATAACTTGTTATCTTATCTTTTGATTATATACT
TGATTGtttatcgaaaaaaatatttgaaattattaGAAGATTAA Coding sequence (CDS) from alignment at sc0000265_pilon:433101..434644+ >XLOC_004886 ID=XLOC_004886|Name=XLOC_004886|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2418bp|location=Sequence derived from alignment at sc0000265_pilon:433101..434644+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCGTTTTCAATTGGTTGTATGACTTGCTCTTCGATTGTTGCACG
ATGCATGGATAGAACGCGAAAACTTAAACGACTGACCATCATTTTGTTAA
CAACATCTATTGTTGGGAATATTTTGTACACGATAACTTATTCTGTGTGG
TTTCCGATTTTTGGTCGTTTGTTATGTGGAATGACTAATACAATCAGATC
TTGTTACATGGATGGCTTCGTTTTCAATTGGTTGTATGACTTGCTCTTCG
ATTGTTGCACGATGCATGGATAGAACGCGAAAACTTAAACGACTGACCAT
CATTTTGTTAACAACATCTATTGTTGGGAATATTTTGTACACGATAACTT
ATTCTGTGTGGTTTCCGATTTTTGGTCGTTTGTTATGTGGAATGACTAAT
ACAATCAGATCTTGTTACATGGGAGAGATTTCAAGAACACATCGTAAAga
agaattgacaaaaataatcacaTTATACGAAATCGTAGGTAATATCGCTT
CAGCAATTTCACCTGTCACTCCCGCATTATTCGCTTTTATGCATTTCAAC
ATAACAGCTGGGTGGGTGATCCGACAAGAAAATGCCATCGGTTTGATATT
AGCCTGCATGACAACATTATTGCTCGTATATAGTGTAAtctttttaaaag
atctttCTGTAGATCCTGTTTTCCCAGAAATCCAAAAGAAACATTTTCCT
AACCAAATGGTGGCAGCTtcgaacaacaacaacaacaacgacaacaacga
caacaacaacaacaacaacaacaacaacgacactCATTTAGAGGACCAAG
GCCTTCTCACTTTCCGAGATATACTACAAAATGACGGTATAATGGTCTTC
CTAACCTACATGTTTGTATCGGCCACACAACATTATCAATTAGACCTTCT
AACAAACATGgtagccattatggattttcaatACAGTATATCTCAATATG
GCATCATTGCTGCCATAGCAACAGCTCTCATGTGCGTTTCAATATACTTC
AtccaaaaaatgatgacgtcatcattagaTACGTATTTTCTATCCATTAA
CAATCTGGTCTGGATAATTATCGCACAAACTTTGGTTTCTTTATCTTTAT
GGATTAAAAGCTGGGCGTCAAACACTCTCGGTTTTATTACAGTTGGTTTG
GTTGTGCTACTGAACTACTTACATGGAACCATTACTATAATTTGTGTGAA
GcagattttattcaaattaacTCCTTCACATTCAGCCAGCATTATCGATT
CTTATCGTTTCAACTCATTAATTGCTGCTGTTCTTATAGCCTTCTTTACG
GCCAGTTACGTTTTCATGGTCAAAGATATGATAATGCCGATCTATAACTT
GTTATCTTATCTTTTGATTATATACTTGATTGtttatcgaaaaaaatatt
tgaaattattaGAAGATTAAGAGAGATTTCAAGAACACATCGTAAAgaag
aattgacaaaaataatcacaTTATACGAAATCGTAGGTAATATCGCTTCA
GCAATTTCACCTGTCACTCCCGCATTATTCGCTTTTATGCATTTCAACAT
AACAGCTGGGTGGGTGATCCGACAAGAAAATGCCATCGGTTTGATATTAG
CCTGCATGACAACATTATTGCTCGTATATAGTGTAAtctttttaaaagat
ctttCTGTAGATCCTGTTTTCCCAGAAATCCAAAAGAAACATTTTCCTAA
CCAAATGGTGGCAGCTtcgaacaacaacaacaacaacgacaacaacgaca
acaacaacaacaacaacaacaacaacgacactCATTTAGAGGACCAAGGC
CTTCTCACTTTCCGAGATATACTACAAAATGACGGTATAATGGTCTTCCT
AACCTACATGTTTGTATCGGCCACACAACATTATCAATTAGACCTTCTAA
CAAACATGgtagccattatggattttcaatACAGTATATCTCAATATGGC
ATCATTGCTGCCATAGCAACAGCTCTCATGTGCGTTTCAATATACTTCAt
ccaaaaaatgatgacgtcatcattagaTACGTATTTTCTATCCATTAACA
ATCTGGTCTGGATAATTATCGCACAAACTTTGGTTTCTTTATCTTTATGG
ATTAAAAGCTGGGCGTCAAACACTCTCGGTTTTATTACAGTTGGTTTGGT
TGTGCTACTGAACTACTTACATGGAACCATTACTATAATTTGTGTGAAGc
agattttattcaaattaacTCCTTCACATTCAGCCAGCATTATCGATTCT
TATCGTTTCAACTCATTAATTGCTGCTGTTCTTATAGCCTTCTTTACGGC
CAGTTACGTTTTCATGGTCAAAGATATGATAATGCCGATCTATAACTTGT
TATCTTATCTTTTGATTATATACTTGATTGtttatcgaaaaaaatatttg
aaattattaGAAGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000265_pilon | genome | sc0000265_pilon:433101..434644 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 514-1212:846 |
| Aaloc | 214-510:549 |
| Aaloc | 1-210:1 |
|
