XLOC_004597 (mRNA) -

Overview
NameXLOC_004597
Unique NameXLOC_004597
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000293_pilon:281860..283551+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004597 ID=XLOC_004597|Name=XLOC_004597|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1692bp|location=Sequence derived from alignment at sc0000293_pilon:281860..283551+ (Clytia hemisphaerica_ch_hm2_pilon)
atgatgaaGTACCACTTTgcagtttgtttgtttttgtttatggtGAATTG CATCATGGGTAGTAAACACCCAAACATTATTATGATTGTGGCTGATGATC TTGTGAGTGTTCTCTTCTGATCTTGCTTTGTTAAGAAATTTACCCAATAG AGGctgcatagtgtcctccccccccccctttataaagggggggggggatt ctgattttggccctatttttaaagtatgggggaaaatgaaaaatttgaaa tttgcttggggaaaataaagaggggggaaaaccataaatttaggaaattt tgactgggggaacttcactgatctcaaggttaTCTTATTGCAAAACccgt ttaagcaataaaatcaaccaacctttttaaataaaccaacttttcaatac aatttcattttcccagcactttcaaggctatattttcaagctttcccaaa atttcaaatttgatttaaggcatttttatgttaaccatatgggggaaccg caaaatcttcaaatagctggggaaattcaaaaaagaggggggaaccgaaa aattttgaaatatggtgggggaaagaaaagaggggggaatggagaaaaaa ttggatttttagtggggggaaccaacccaggaggacactatgggcTGAAA TACTCCGGGTGGGAAATTTCTCAAATGGAGGCCAGGATGTTAAAGGGATA ACCAAGctatttttcttgtttatatATATGTTGTAGAACGATAGTGTATG CGAGCTTTCAGAATTGTACCCTCTCTGTGAcacatctgaaaatgaaaata actggAAGCGGTTGAAATAGGGATGTTCTGGAGGATCCAAAACTTAATAA AGTGATATGTTCTTGAAGCCATAACTTCGTCTTTGTAGTTTATTTATAAA AGCTTGTAATCTGATGGACGGTAAATCCTTTAAGCTATCTTAAGCCTCTA ATGACGTTTATATTATGTGGAATTAAGACCACTTAAACCATTTTAAGTTC CAATAACATTTGGAAAACATGGAGCTAAAACAAATATAAATCTAATCTGG TGTTTTAGTGTGAATCTCGTTTAATCGTATAGACCACCCATTTGACAAAC GTACATGACATTTCGCtacaaaaagtatatttttaaaTGCTTCCATTTAA AAGTAATACGAATACGATAAATTGAAAACAATTGCAATATGACCTTAGAA AGGATAAACAAATTTAAAGACCTCAAATGTTTATAAATTTCAATGAGATT GCGCAATCAAATGTTATCGTGTTCTCTGTTTCCCTCTAATACGGAAACTC AACTTGAGTCAATGTTAGTACTAAGAACCCAATTAAGTTTGGAACGTAGC GTGCTTCCAATAACCGAATATCAAACAGTTAGCTGCACTGGTGATGGATA ACATTGCCAACATAACGCATTTCTATTACTTTTGATTTATCTCGgttcat tcttttttcaatattcGATCATGTTCGATCTTTCTTTCCAGGGTTTCAAC GATGTCAGCTTCCATGGTTGTCCACAGATACCAACACCCAATCTCGACCT CCTGGCAAACAAAGGAATCATACTCAATAATTACTACGTTCTCCCAAACT GTTCACCCACCCGTAGTGCTTTGCTGACCGGACGGTACCCTATCAATACG GGTATGTGTTCAGTTtgcattttaacttttattttcaaatga

Coding sequence (CDS) from alignment at sc0000293_pilon:281860..283551+

>XLOC_004597 ID=XLOC_004597|Name=XLOC_004597|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=606bp|location=Sequence derived from alignment at sc0000293_pilon:281860..283551+ (Clytia hemisphaerica_ch_hm2_pilon)
atgatgaaGTACCACTTTgcagtttgtttgtttttgtttatggtGAATTG
CATCATGGGTAGTAAACACCCAAACATTATTATGATTGTGGCTGATGATC
TTatgatgaaGTACCACTTTgcagtttgtttgtttttgtttatggtGAAT
TGCATCATGGGTAGTAAACACCCAAACATTATTATGATTGTGGCTGATGA
TCTTGGTTTCAACGATGTCAGCTTCCATGGTTGTCCACAGATACCAACAC
CCAATCTCGACCTCCTGGCAAACAAAGGAATCATACTCAATAATTACTAC
GTTCTCCCAAACTGTTCACCCACCCGTAGTGCTTTGCTGACCGGACGGTA
CCCTATCAATACGGGTATGTGTTCAGTTtgcattttaacttttattttca
aatgaGGTTTCAACGATGTCAGCTTCCATGGTTGTCCACAGATACCAACA
CCCAATCTCGACCTCCTGGCAAACAAAGGAATCATACTCAATAATTACTA
CGTTCTCCCAAACTGTTCACCCACCCGTAGTGCTTTGCTGACCGGACGGT
ACCCTATCAATACGGGTATGTGTTCAGTTtgcattttaacttttattttc
aaatga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_004597XLOC_004597-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000293_pilongenomesc0000293_pilon:281860..283551 +
Properties
Property NameValue
Aaloc103-303:1492
Aaloc1-102:1