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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000347_pilon:262984..269975+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004584 ID=XLOC_004584|Name=XLOC_004584|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6992bp|location=Sequence derived from alignment at sc0000347_pilon:262984..269975+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAACAAAACAATGTTATTTTACATCGCTGGTTTATTGCTTTTTGC
GACGATCGGAATCCAAGCACAACGAAGCCCTTCCAAAACATTTTTGGAGG
TTGTTGGACTTTCAGAACGTGTGGTTGGTGGAAAGCCTGTGTCCCAAGGC
ATGTTTCCATGGATTGTTTTCATCCAGGCTAATCACAAATACAAGAATAA
TACACAGACTAGTAATTTGTGTGGAGGATCGCTTATCCATGAAAGGTACT
TCATTTTTCTATCTATTCGCGCGCGTGTTTGCGGTTCGTTCGCGCGCTTC
GCGTTCTGCTGGGACTGTTAGTATTTACAGTAATTTTCTTGAATATATAC
TttataaaatatgttttttccTTCTCAATGACTTGTTGTAATCATTTGGT
GTAATTACGACATGGTTTCTACGTCACCCTGGAAACCTGTTCGAATGATT
TGCATTCCTTTTGCATTTTGTATGTGCAATATTTGTTCTTCGATTTCATT
GTTTTCCAAACTTCGATGTCATCATTTTTGTGGTACGTTGCTAAGATGGG
CGAGGGATCCTGCAAGTTTTGCATTTTCGTTTTCAAACGGTGAAAGTAAA
TTAACGACTTTTGTCGGTAATTTTGTCGTGTGTCGGTCGGAAAGAGGAAA
AAGAGTAGGATGCGATTACAAAAAATGGCCGATTTTTTAACACATCATTT
ACAACATTGACGGATATTAGAAGCCATAGACTTTCTTTCTTATGAAGCTT
TTATGATATCCGCTCACAGGTTTTTAGCGGAAAGCATTTCGCGGTCTTTA
TTATATGATAACGGTATTTcataaaactttcaatttttttagcaGATTAT
TTGTTCAAGTAGAATCACTAGATTTCTaactttctgactttctgattaaa
aaaaactttgatggTAGTGTTACTTGTATACTAGGTAAACATCTTACAAT
TTTGAGGTGCCGAGAGGTGATTAACATACGTAACTCATACAAAACTTGAA
TATTTCCAGAAAGCTTCTTCGCTCTTTATCTTCTATGAGACACGTGTAGA
TGCAGTTAATCGCCATCACCGATCATTAAAACATTCCATTCTTTTTAACA
CCCTGTTCACATTAAGGAAATGAAGAAGTTCCGTCGAGGAAATCACCACC
CTCAAAATTAACcaagaatttcaaaagtttattttagTGGTCTCTTTCAT
TCGCGTTTTCAAGTTTGTTCGCCTGCTAAAACTGTTCTTCTTAAATTCTT
AAATTGTAGAACGGATTAATAAAAATCGTTACgtatttgtaacttttttc
ttttcttgaccGATTTAACTTGTGGTTTTAAGGACTGCCTCTGTAAATGT
CCTTCGATCGGAGAGCAATATCATCTTTTCGATTGAGCTTTCCATACCCA
CCTTCTATACCCACCTTCTAACAGCTCGCACTTACGTCATAAACACGTTA
AGCTGACAGAACATACTGAGGATCATCCTCATACATCTGGGAATAGCGCA
TGACAGAAATAGAAAGCTATTCGATAGCAGTGTTgaagagagaaagagag
agatgTTTGCAAATTGAATTGCTGCCACTGATGCAGCCCATTACAAGGTG
TCATTATCATCGGCTAATCGTGTGTAATTGTTATAAGACACACAAATTAT
GAACATCAATTCGATTAAAACAACTTTCTCTATTTCATCATGATCTTTAT
CTTCGGTTTTGTTTCCACAACCCGCTCAACTCAAAATATTACATTTTCAA
AAGGTGGTTATTGAATTTCTTAAAACTTCCCCTTAACTTTGTTTGTGGAG
ATCAACCTTTGTATATTGTGTGAACTTCCTTCTTCATTAGAGAAGAAAGG
AGAAGAAAGGAGATCTTGTAACACACACCTCATCTCATTATTTTGATCAT
CCTCCAATATTCATGTGTTTGTTTACACAAACGAGCTTACTTTGCATGTT
GCAAGCTCATCAACATCAACTCCATTGTGATTCAACTGATGACATGATAT
ATCCAACCTAATTATCATAATTTATTTATCATATTCACCCTACCTTCATC
CAATATCAATAAGATCAATAATTTTCCCGATATCATCAATGAAATTTAAC
AATATCTGAGTGCAAAAGCTATCTCTGCTTCATCTTCTACCTTTTACTGA
TTGACCACGCTACTCTGGTTGAAACACGGGGACCTTTTTCACAATATATG
AGGACTCAGgttctttctttattttgttagaGCTATAAACGATGGTTTCA
AAACAGGTGGTATTTTATGGTGCTAATTATCGTTTTATTACAGCGGAAAT
AACGCGACATtaatttctaacattttttaatttgatcgAAATTGACCAAA
TACCGAAATGATTTCCGCGCCATTTGCGGGACCGGAATATTTCAAAAGGG
GGATGAGTTCAAGAGACGTCAATTCGTTGAATTTGTTTTCATCGTTAAAC
TTGCTCAGTGTTCTGAAATTGTTGAATGTTACCACACATatcgttgttgt
tattattaACAAAAACTCGCGAATAAATGAACTTTTTGTTCTCAGAAAAC
CACCctttcatatctttttaattaaCATACTTCAAATGGTCATCTAATCA
CTCGGTCAGTACTCGATTAATCTCATCAAAGTCCACCAAACTATTCTCAA
ATCGATAGTTATCAAAGGCGCCTTTCTTATCTCACAAATCGAAAATAGCA
CACACTTATCTCCAGAATGTTTGTTTGTTATCTCAAACACAAACAATCTG
CGACTTAATGATCAATTTTCATGGATTCCTAAGGAACTAATCATCAATGA
TCGGAATGAAGGCAACACGATCGACAAAAGGCAACCTGTGACGACCGTCT
AAAAAAGCTGTGAAGACCTTCCAAAATGTGTCAATTTCTGTCAGATTTCG
AAAAACGGGAATAAAAAGGGACCAAAGAAGCTAATACATTTAATCAAATT
TATCAAACGGATACTTTTAAATGAACAATTTGATGTTGGGAAGGTTGTAA
GATTAGGGAGCTTATAAATTGATGAGATCAAATTGAAACTGTATAATAAG
CTTTGGATTTTCGTGTCTTTTGATCTTGTTTACATGAAGTCATGCTGCGA
AAGATGCGGGAACACTCAACAATTTGAAACTATTtctctttttcatcaaa
tttctctAATTATTTTAATGAGATTGATTTTTCTGACCAACATTCAATAT
CGATCTTTCAGAAGAGTTAATCAGAGTATTGTCTTTAAAGATCTAATTTT
TTCTTCGCACAAACTTAACGTGAACTATTTGATTCGGCATCCTTTGAACT
TCAAACTTCCCTGGTCGAAGAATCGATAGCCAAATGAACCACCTGGAAAG
ATCTGTTACAAAAACAGCTTGCTATTTATCTAAACTACTAAAGAGCTAGT
CATCCTCTAAACAGTTCCTGTATACTGCTGAAAAGGATTGAAAAGAAAAC
caacattaaaaaaactttttaacataatttgtTCTCCATCCAACATTTGT
TTTGTAAAATTCTTCATCTCACTCACTTTCATCTTCAGGTGGGTGTTGAC
TGCAGCACATTGTTTACCTCACGGCGAACGTACTACACGAGTGGTAGTTC
ATATCGGGAAGAAATCGCCTGTCTCCTTCAGTCAAAGTCGAACCAACCTC
CCCGCGGAGAAATACCGAGTACGATCTATCTTCATCCATCCAAATTATGC
TGGTAGCGGTTTCAGTGGTAAGTGTAGTATTCGCTGAAAGTTCTCATTTT
CAACAGCTTTAAAAGGTCGAATTTGCAAATACCTATCTAATAAAAGCATA
GTTTCAaagcttgttttgattttatcatcAGGTGCTGACCTTGCACTCTT
ACATTTGCCTCGTCCATCGAAACATCCCACCATTCGATTGGCTATTTCAC
CGGTAGACGATAAATGGTACGAAAGTGGATCCATAGCAACGGTTGCTGGT
TGGGGTTCCACCTCACCTCACGACACACAACAAATCTCACAAGAACTTCG
TTCTGCTGAAGTTAAGGTTAGTGACATATTTCATTACTTAGATGGAAAAC
TCCCCTCATTCATTAACCAATGTGACCAACCATACAATAAGTTAGTTATT
AAGTGGAAATTTCTAGCTTTACTATCGCAAAGATTTGTATTTCTCTTGAG
AGATTCTAATGACGAAACACTTTCTTTCAATCTTGCAGGTTGTAAGTCAC
AAGAAGTGCAACAAAGCAAATTCGTTCAACGGGTCCGTTCTGAAAGACAT
GTTTTGCGCGTCCGGTGACGGGAAAGATGCGTGTTATTCGGACAGTGGTG
GTCCTTTAATGGTACGGGATGGATGTCGGGATGAATGGGTCTTGATCGGC
GTCGTGTCGTGGGGAAAGAGTTGCGCTCACAAAGATTACCCTGGTTAGTG
ATCATATTTTCCTTCGATGAGTTTTTAAATAATGAACTCTTGAACTCGCt
gctcatttttggacctacctgagcTTCTATAAACTAGCCCGTGTTCGTCA
CCAGCTGTTTCGTTATTGGCTAATTCCACCCCTTATAACTAATAGCTGGC
CGTACTTCATTTCGTGTACTTAAATCTGTCATATTTCTGACTTCCAGGTG
TTTACGTCAAATTATCGGTGTACTCTGATTGGCTGATGGACCGTTTGTAT
CCAGGACGACAGAAATCGTATTTATCAACACAATGTTGTTGTCGGCACCA
AAATAATGAGGTGAGTCAAAACATTCTACGAATTGTCTGCTATGTTTCGC
TGTTTGAAGCTTGTTCAATTGTAAGAAAGAAAATGCACTGTTCTTTTgat
ctttcttcattttcattatcTTACAGATCGATGAGAATGCATTGcgaaca
aaattcaaaaagaagcgACACAATGAACATCCTGCAAACATGAAGCTCGT
CCATCTTCAGTCACGTGGTTTCTCCGGTCATTACCGCTTACTAAAGGGAC
CGCAAGGACCACCCGGCGAACCCGGAAGACGAGGAAGCGCCGGCCTTCCC
GGTCGTCAAGGACCTCCGGTAAGCTTGATCGAGTTAAACATTTTTCAGAT
TTGGCATTTCTTTACTTcgctttaaatttaaaaaaatatatgaaattcGT
TATGTTTATTTTAATAAGCATGTTTTCACATTTTCAGGGTGATCGAGGCA
AACAAGGACCAAGAGGAAGAGTGGTAAGCAAGACAATcatgagatttaaa
aaaatccttaattttcggattctttttttctcttacaGTTGACCTTTTCG
GTACCGTTTCGTAAATTATATTGTTCACATTAGAAGGTCGTCTCATTCAC
TTTGGTcacgaaatgcaattttttactgaaaatcctcaaaaacTCTAGTA
TATAGGAATATAAAAGAGTGTTGACCTTGGCAAGAAGTGGGtgtcaaccg
cgaaaattagttctgcaAAATGAGCCAATTTAGTACCCTTGCaacgcgaa
aataagttccgtgaaaattagttccgtgaaaattgggatgagctggagtt
tttataagatacttcactaattggtcgtTTGAAgaaatagagatgacgcg
ttctttaaataaagtaacaaaattgttttactacgtgttaacgaccaacc
aaatcaaataagagcttgtaaaaactccagcttgtccctgaaaattagtt
tccttaaggtattcaagatgatgatttttcatattttagggAGCAGCAGG
AAAGCCAGGTTTGCCAGGAAACCCAGGAAAGTTGATCGGTGCAAACGACA
AGATTTATTCCAGCTTGGAAGAAGTCAATCGAGTACTTGACGAGGTCAAG
AAGTTGAAAACTGAGCTAGAAATGACTATTCGCGAAACTAGGCTAGGTAA
AGTGATCTTATTATTTCTGCGTAGAGGATCCAATATTTCCGAACCATTTC
CATTCATCTTTTGCAAGCATTCAAGTTTCAATTACCTTCCTTGACtgaat
ttgttttgaactttttcCCCAGGCCGAACAATTGAGCATGCAGCGCGAAC
TTGTCAAGACATATTTCGATCGAACACCGGTCTCGTCAATTCTGGCAAAT
ATTGGTTGAGTCCGCAACAATATGATGACTCAGCGTTTGTTGGATACTGC
AACATGGATGACGTAGGTGGGGGTTGGACACTAGTTTATTCCTTCAAAGT
ATTACGTCATCAAAATAAGTCGTTGGAGATGGTACCAAAACCAAAATGGC
GGAAACACGAGCACAAAGAAGAAGGAGCATCAGATACAGCGCCTAAATGT
AAGTTTCAACTTGTCTGTTTTGAATGCTTTGTgttttcatttgtcttttt
gAGTGCTTTTCACATTGCTGTTGAATCAAACAAGTCAGTATTACAGGCTC
ATGATCTCTAACCATAGCCTAGTTAACTCTAACCATACATTGAAGATTGA
AGTTTTAATGTGCTGATTAAGCTATTTCACTGTCTAAGAAATAAGCTCTA
AAGATGTATGAGCGGGTTTTGCTGTCAGACTCATTTTACACTCGATAGAG
TTGTCGTTTTTCGAAACACTACCACGGCAAATCTTCATTGTTAAAAATAT
GCACAAAAGGAAGATACATCCAGGTCTGTAATGAATTTTAGTTCTTCAAA
CTCACACTTGACTTCTTCTCTCCTTTTTAGACCCCAAGGACCATGGAGCA
GTGGATTACAACTTGTGGCGATACATCGGTGCTGAGATTCTCATCAAATC
CGTACGCGGTGATTGGTTGAAATGTAAATCAAGTGAAGCGTCTTCAAGAT
ATCTCGATATTTTCCCGCCTACTTCTTCTTTGAAAAAGAGACCAATTatt
cataaactagactgtgagaTTGTAAAAAATGAACATGAGTCAGTAAGTGG
CTGTCTCAGGCTACCAGAGGCCATTATGTGGAACCGTAGTGGACTGGTAA
TGACCGAGTCTAGTCTTTTAGACTGGGCAATTCAAAAACACTGTAGTGGT
GATCAAAGAATAGACGATGAAGTTTTGTTTTATATACGGTAA Coding sequence (CDS) from alignment at sc0000347_pilon:262984..269975+ >XLOC_004584 ID=XLOC_004584|Name=XLOC_004584|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3900bp|location=Sequence derived from alignment at sc0000347_pilon:262984..269975+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAACAAAACAATGTTATTTTACATCGCTGGTTTATTGCTTTTTGC
GACGATCGGAATCCAAGCACAACGAAGCCCTTCCAAAACATTTTTGGAGG
TTGTTGGACTTTCAGAACGTGTGGTTGGTGGAAAGCCTGTGTCCCAAGGC
ATGTTTCCATGGATTGTTTTCATCCAGGCTAATCACAAATACAAGAATAA
TACACAGACTAGTAATTTGTGTGGAGGATCGCTTATCCATGAAAGATGGA
GAACAAAACAATGTTATTTTACATCGCTGGTTTATTGCTTTTTGCGACGA
TCGGAATCCAAGCACAACGAAGCCCTTCCAAAACATTTTTGGAGGTTGTT
GGACTTTCAGAACGTGTGGTTGGTGGAAAGCCTGTGTCCCAAGGCATGTT
TCCATGGATTGTTTTCATCCAGGCTAATCACAAATACAAGAATAATACAC
AGACTAGTAATTTGTGTGGAGGATCGCTTATCCATGAAAGGTGGGTGTTG
ACTGCAGCACATTGTTTACCTCACGGCGAACGTACTACACGAGTGGTAGT
TCATATCGGGAAGAAATCGCCTGTCTCCTTCAGTCAAAGTCGAACCAACC
TCCCCGCGGAGAAATACCGAGTACGATCTATCTTCATCCATCCAAATTAT
GCTGGTAGCGGTTTCAGTGGTGGGTGTTGACTGCAGCACATTGTTTACCT
CACGGCGAACGTACTACACGAGTGGTAGTTCATATCGGGAAGAAATCGCC
TGTCTCCTTCAGTCAAAGTCGAACCAACCTCCCCGCGGAGAAATACCGAG
TACGATCTATCTTCATCCATCCAAATTATGCTGGTAGCGGTTTCAGTGGT
GCTGACCTTGCACTCTTACATTTGCCTCGTCCATCGAAACATCCCACCAT
TCGATTGGCTATTTCACCGGTAGACGATAAATGGTACGAAAGTGGATCCA
TAGCAACGGTTGCTGGTTGGGGTTCCACCTCACCTCACGACACACAACAA
ATCTCACAAGAACTTCGTTCTGCTGAAGTTAAGGTGCTGACCTTGCACTC
TTACATTTGCCTCGTCCATCGAAACATCCCACCATTCGATTGGCTATTTC
ACCGGTAGACGATAAATGGTACGAAAGTGGATCCATAGCAACGGTTGCTG
GTTGGGGTTCCACCTCACCTCACGACACACAACAAATCTCACAAGAACTT
CGTTCTGCTGAAGTTAAGGTTGTAAGTCACAAGAAGTGCAACAAAGCAAA
TTCGTTCAACGGGTCCGTTCTGAAAGACATGTTTTGCGCGTCCGGTGACG
GGAAAGATGCGTGTTATTCGGACAGTGGTGGTCCTTTAATGGTACGGGAT
GGATGTCGGGATGAATGGGTCTTGATCGGCGTCGTGTCGTGGGGAAAGAG
TTGCGCTCACAAAGATTACCCTGGTTGTAAGTCACAAGAAGTGCAACAAA
GCAAATTCGTTCAACGGGTCCGTTCTGAAAGACATGTTTTGCGCGTCCGG
TGACGGGAAAGATGCGTGTTATTCGGACAGTGGTGGTCCTTTAATGGTAC
GGGATGGATGTCGGGATGAATGGGTCTTGATCGGCGTCGTGTCGTGGGGA
AAGAGTTGCGCTCACAAAGATTACCCTGGTGTTTACGTCAAATTATCGGT
GTACTCTGATTGGCTGATGGACCGTTTGTATCCAGGACGACAGAAATCGT
ATTTATCAACACAATGTTGTTGTCGGCACCAAAATAATGAGGTGTTTACG
TCAAATTATCGGTGTACTCTGATTGGCTGATGGACCGTTTGTATCCAGGA
CGACAGAAATCGTATTTATCAACACAATGTTGTTGTCGGCACCAAAATAA
TGAGATCGATGAGAATGCATTGcgaacaaaattcaaaaagaagcgACACA
ATGAACATCCTGCAAACATGAAGCTCGTCCATCTTCAGTCACGTGGTTTC
TCCGGTCATTACCGCTTACTAAAGGGACCGCAAGGACCACCCGGCGAACC
CGGAAGACGAGGAAGCGCCGGCCTTCCCGGTCGTCAAGGACCTCCGATCG
ATGAGAATGCATTGcgaacaaaattcaaaaagaagcgACACAATGAACAT
CCTGCAAACATGAAGCTCGTCCATCTTCAGTCACGTGGTTTCTCCGGTCA
TTACCGCTTACTAAAGGGACCGCAAGGACCACCCGGCGAACCCGGAAGAC
GAGGAAGCGCCGGCCTTCCCGGTCGTCAAGGACCTCCGGGTGATCGAGGC
AAACAAGGACCAAGAGGAAGAGTGGGTGATCGAGGCAAACAAGGACCAAG
AGGAAGAGTGggAGCAGCAGGAAAGCCAGGTTTGCCAGGAAACCCAGGAA
AGTTGATCGGTGCAAACGACAAGATTTATTCCAGCTTGGAAGAAGTCAAT
CGAGTACTTGACGAGGTCAAGAAGTTGAAAACTGAGCTAGAAATGACTAT
TCGCGAAACTAGGCTAGggAGCAGCAGGAAAGCCAGGTTTGCCAGGAAAC
CCAGGAAAGTTGATCGGTGCAAACGACAAGATTTATTCCAGCTTGGAAGA
AGTCAATCGAGTACTTGACGAGGTCAAGAAGTTGAAAACTGAGCTAGAAA
TGACTATTCGCGAAACTAGGCTAGGCCGAACAATTGAGCATGCAGCGCGA
ACTTGTCAAGACATATTTCGATCGAACACCGGTCTCGTCAATTCTGGCAA
ATATTGGTTGAGTCCGCAACAATATGATGACTCAGCGTTTGTTGGATACT
GCAACATGGATGACGTAGGTGGGGGTTGGACACTAGTTTATTCCTTCAAA
GTATTACGTCATCAAAATAAGTCGTTGGAGATGGTACCAAAACCAAAATG
GCGGAAACACGAGCACAAAGAAGAAGGAGCATCAGATACAGCGCCTAAAT
GCCGAACAATTGAGCATGCAGCGCGAACTTGTCAAGACATATTTCGATCG
AACACCGGTCTCGTCAATTCTGGCAAATATTGGTTGAGTCCGCAACAATA
TGATGACTCAGCGTTTGTTGGATACTGCAACATGGATGACGTAGGTGGGG
GTTGGACACTAGTTTATTCCTTCAAAGTATTACGTCATCAAAATAAGTCG
TTGGAGATGGTACCAAAACCAAAATGGCGGAAACACGAGCACAAAGAAGA
AGGAGCATCAGATACAGCGCCTAAATACCCCAAGGACCATGGAGCAGTGG
ATTACAACTTGTGGCGATACATCGGTGCTGAGATTCTCATCAAATCCGTA
CGCGGTGATTGGTTGAAATGTAAATCAAGTGAAGCGTCTTCAAGATATCT
CGATATTTTCCCGCCTACTTCTTCTTTGAAAAAGAGACCAATTattcata
aactagactgtgagaTTGTAAAAAATGAACATGAGTCAGTAAGTGGCTGT
CTCAGGCTACCAGAGGCCATTATGTGGAACCGTAGTGGACTGGTAATGAC
CGAGTCTAGTCTTTTAGACTGGGCAATTCAAAAACACTGTAGTGGTGATC
AAAGAATAGACGATGAAGTTTTGTTTTATATACGGTAAACCCCAAGGACC
ATGGAGCAGTGGATTACAACTTGTGGCGATACATCGGTGCTGAGATTCTC
ATCAAATCCGTACGCGGTGATTGGTTGAAATGTAAATCAAGTGAAGCGTC
TTCAAGATATCTCGATATTTTCCCGCCTACTTCTTCTTTGAAAAAGAGAC
CAATTattcataaactagactgtgagaTTGTAAAAAATGAACATGAGTCA
GTAAGTGGCTGTCTCAGGCTACCAGAGGCCATTATGTGGAACCGTAGTGG
ACTGGTAATGACCGAGTCTAGTCTTTTAGACTGGGCAATTCAAAAACACT
GTAGTGGTGATCAAAGAATAGACGATGAAGTTTTGTTTTATATACGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000347_pilon | genome | sc0000347_pilon:262984..269975 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1591-1950:6633 |
| Aaloc | 1315-1587:5975 |
| Aaloc | 1156-1311:5690 |
| Aaloc | 1120-1155:5138 |
| Aaloc | 928-1119:4827 |
| Aaloc | 817-927:4600 |
| Aaloc | 610-813:4189 |
| Aaloc | 427-609:3834 |
| Aaloc | 247-423:3540 |
| Aaloc | 1-243:1 |
|
