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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000293_pilon:120531..123274- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004579 ID=XLOC_004579|Name=XLOC_004579|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2744bp|location=Sequence derived from alignment at sc0000293_pilon:120531..123274- (Clytia hemisphaerica_ch_hm2_pilon)
TTTATTTTTAGTATGTTGTCAACAAAAATAAATCAATTATCAAAAACAGT
ATTATTACGTAAACTTTTGATTGGAAACGTATCAGCACAATCTAAGGTAT
GATTTAAAATAATTATTTTTGGAAAATCATTTTGTAAACATAGCGTCGGC
CTGGGTCTAGGTCCCAGGCAAAAATTAAGTTCCCTCTGAGTTTTAAGTCC
CTCCAAAGATTCTTGAAATATTTGTGGTAGCCCCCAGGGCATCCGACACT
TTTAAAAGTTTTTTTCTGCTAAAAAAGGGTTATTCAATGTGTTGCAGTTC
GAAGGTTATGACAAAATGTTTTGCTCATTTTCTATAAAAAACTTTTGCTC
ATTTTCTATAAAAAACTTTCAACTTCATGAGCTTTAATTTGAGTAATTGA
AGAATTGAAGCCAACCATTAAGATAAAGTATTCAGCTGTCACGTTGAATG
ATGAGGTTTCAGCTCCCCAAAGTACATTAGGTCCCCCAAATATTTGAAAC
ATCTTTAGCCCCCACCTTTTTGGGGCTTTTTGGAGGATGTAACCCCCCCC
CCAACTAGCAGGGCTGACGCTATGAAAACTTTAGAATAATTACATCTCTT
ATATATGAATACATTATGATACATAATAAACTTTATAATATATTACAGAA
ATGATTTGATACAACTGTTTATTACCCAATACAATGAAGCTACATTTTTA
TCTTTTCTTACTTTAGAACCTACATGGTATAGTTGCTGGCTGCTACCAAG
CCCCAGGTGAAGATGGTGAAATTGTATTAACAGGGACGACTGAATCTCTT
AACACTGAAACTGGTGGCAAACTTTTACAAGCGCTTAACACGTAATATGA
ATTTATTTTCTTGACTAACAAAAAACTTACATCCAAAAAGTCAAAATTAC
AGAATCAATGATGACATGCATTCGAGCACATTACATTACCGTTGATGTTT
TCCTTGCATTTCAGTTCAAACTTTGATGGGAAACCTGGCAGCGTCCGAAC
ATTCACGAATTTATCAGATGTATGAAACTTATTCTTGTGAAATATTTTTC
AGTCAAATCGTCGTTTTAGAAATTTATGCTCATTCTCTGTCATTCGCCAT
TATACTAACTGTAGAAATTTGTTTTCTGGTTTAATCGAATCTGTTTTCTT
TTTTTCACCAGAAATACCCTTTGCTGACTGTCTGTGGTTTGGGTGAAGAG
AATTTGGATATTGATGAGAACGAGTGTTTGGACGAGCGCAAGGAAAATGT
ACGGATTGGGGCTGGAGGTATTTCAATTTTCTTTTCTTTGTACATTTTTG
TAATGCTTTGTATATCCCTGTGATCATTCCCTTTTGCTCTATAACTGGAT
GATTCAGGTATTTTTGTTTCAGGTAAGTGTTTGATTGGAGGGGAAGGTTT
TTAAAGTCTATTTTCATTAAAATCTTCGAATAACCTTTCTTTCAGCGGGC
GCCAAAGAGTTGAAGAAATACAAAGTGGACGTGATGTCATTGGATGATTG
TGGAGATGCTCAATGTAATGTCTTCTTTCTTTTGATCAGTGATGGAAACT
GTTTTATTTGAGTTCTTCTCATTGCACTACATTACTGTCACTAATTTAGA
GTTGAAGAATTCGAAACATTTTCAGCTCTTCCTTCTTTCCTTGTGTATTA
ACAAGATGTGATTAATTTGTTCTTTCGTGATAGCTGCTGCCGAAGGAGTT
GGATTGAGTACTCATTCTTTCCAAGAATTCAAATCGAAAAAGGAAAATGA
AACCTCTTGCACATTCAATGTCCTGTCCTCTGCGTGAGTATTTTACTTTT
AATCCAAACTTAGGTATAAAGAAAAGGTTTGATCTTATAAACTTCTCACT
TACTTTATGATGTCTTTATCTGAGAAATCATAGAGATAAAATCCAATGTC
CATTGAATTTATTTCAGCCAAACTTCAGAGTTCGAACAAGGTTTGGCGAT
GGCAGAGGGTCAGAATTGGGCTCGTGATTTGATGGAAACGCCTTCTAATT
TCAAATATCCTGAACTGTTTGCTGACAAAGTTGTCCAACGATTCTCGGCG
TTCAAGAATGTTGATGTCATCGTCAGGTGAATAAATTATTGTGAATGATT
TTGATCTTTGAAAATGAACGCATTTTTCCGACTCCAGGTAGGTTTGTCGT
AACAAGAACTTTTACATATAAAATACAAAAACCTAATGAAACAAATAGAA
GAAGAAACAAAATCATTAATTTTGAGTTGACCAATAATAGTACATGTTTT
ATAAGAATATGCTAAGAACTGTCACCATCGTATATTTTTACAACCGAACC
GTTAATAAGAATCTCGAGACTTCACAAAATTGTCATACTTTTTTTTTTGG
GTGGGGGGTATGTATATAGATATAGGCAGGGTTTAGATTCTAAACTTAGA
ATGTCGTTAAGAATATTATGGGTTGATTTTTATCCTAAAGTTGAGAATAT
CCATGATGAAATGGAAAAAAATACCATTCTTATAACAAAAGCGTTTAGGG
TTTAAGAATGTCCCTGAGCCATTGGCTCCTTGCAAAGTATCACCCTGTAT
TAGCTGTTTGGACCATCTTGCAAGCAGCGGTTTTTCATTTTCTTTCATTA
TTTTCCAGAGATGATGTCTGGGCGCGAGAGAAAGGAATGGATTGTTTCCT
GTCAGTTGGTAAAGGTTCCGATAAGAAACCCATGTTTGTGGAACTTCATT
ACAACCAAAATGCAGATGAACAAAAGAAAGTGGTTCTTGTTGGA Coding sequence (CDS) from alignment at sc0000293_pilon:120531..123274- >XLOC_004579 ID=XLOC_004579|Name=XLOC_004579|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1692bp|location=Sequence derived from alignment at sc0000293_pilon:120531..123274- (Clytia hemisphaerica_ch_hm2_pilon)
TTTATTTTTAGTATGTTGTCAACAAAAATAAATCAATTATCAAAAACAGT
ATTATTACGTAAACTTTTGATTGGAAACGTATCAGCACAATCTAAGTTTA
TTTTTAGTATGTTGTCAACAAAAATAAATCAATTATCAAAAACAGTATTA
TTACGTAAACTTTTGATTGGAAACGTATCAGCACAATCTAAGAACCTACA
TGGTATAGTTGCTGGCTGCTACCAAGCCCCAGGTGAAGATGGTGAAATTG
TATTAACAGGGACGACTGAATCTCTTAACACTGAAACTGGTGGCAAACTT
TTACAAGCGCTTAACACAACCTACATGGTATAGTTGCTGGCTGCTACCAA
GCCCCAGGTGAAGATGGTGAAATTGTATTAACAGGGACGACTGAATCTCT
TAACACTGAAACTGGTGGCAAACTTTTACAAGCGCTTAACACTTCAAACT
TTGATGGGAAACCTGGCAGCGTCCGAACATTCACGAATTTATCAGATTTC
AAACTTTGATGGGAAACCTGGCAGCGTCCGAACATTCACGAATTTATCAG
ATAAATACCCTTTGCTGACTGTCTGTGGTTTGGGTGAAGAGAATTTGGAT
ATTGATGAGAACGAGTGTTTGGACGAGCGCAAGGAAAATGTACGGATTGG
GGCTGGAGAAATACCCTTTGCTGACTGTCTGTGGTTTGGGTGAAGAGAAT
TTGGATATTGATGAGAACGAGTGTTTGGACGAGCGCAAGGAAAATGTACG
GATTGGGGCTGGAGCGGGCGCCAAAGAGTTGAAGAAATACAAAGTGGACG
TGATGTCATTGGATGATTGTGGAGATGCTCAATCGGGCGCCAAAGAGTTG
AAGAAATACAAAGTGGACGTGATGTCATTGGATGATTGTGGAGATGCTCA
ATCTGCTGCCGAAGGAGTTGGATTGAGTACTCATTCTTTCCAAGAATTCA
AATCGAAAAAGGAAAATGAAACCTCTTGCACATTCAATGTCCTGTCCTCT
GCCTGCTGCCGAAGGAGTTGGATTGAGTACTCATTCTTTCCAAGAATTCA
AATCGAAAAAGGAAAATGAAACCTCTTGCACATTCAATGTCCTGTCCTCT
GCCCAAACTTCAGAGTTCGAACAAGGTTTGGCGATGGCAGAGGGTCAGAA
TTGGGCTCGTGATTTGATGGAAACGCCTTCTAATTTCAAATATCCTGAAC
TGTTTGCTGACAAAGTTGTCCAACGATTCTCGGCGTTCAAGAATGTTGAT
GTCATCGTCAGCCAAACTTCAGAGTTCGAACAAGGTTTGGCGATGGCAGA
GGGTCAGAATTGGGCTCGTGATTTGATGGAAACGCCTTCTAATTTCAAAT
ATCCTGAACTGTTTGCTGACAAAGTTGTCCAACGATTCTCGGCGTTCAAG
AATGTTGATGTCATCGTCAGAGATGATGTCTGGGCGCGAGAGAAAGGAAT
GGATTGTTTCCTGTCAGTTGGTAAAGGTTCCGATAAGAAACCCATGTTTG
TGGAACTTCATTACAACCAAAATGCAGATGAACAAAAGAAAGTGGTTCTT
GTTGGAAGATGATGTCTGGGCGCGAGAGAAAGGAATGGATTGTTTCCTGT
CAGTTGGTAAAGGTTCCGATAAGAAACCCATGTTTGTGGAACTTCATTAC
AACCAAAATGCAGATGAACAAAAGAAAGTGGTTCTTGTTGGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000293_pilon | genome | sc0000293_pilon:120531..123274 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 712-846:136 |
| Aaloc | 553-708:827 |
| Aaloc | 454-549:1060 |
| Aaloc | 385-450:1298 |
| Aaloc | 277-381:1584 |
| Aaloc | 223-276:1780 |
| Aaloc | 97-219:2029 |
| Aaloc | 1-96:2745 |
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