XLOC_004578 (mRNA) -

Overview
NameXLOC_004578
Unique NameXLOC_004578
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000293_pilon:210217..211139-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004578 ID=XLOC_004578|Name=XLOC_004578|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=923bp|location=Sequence derived from alignment at sc0000293_pilon:210217..211139- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTTCGTCGTATTTTAAATGTAAGTATAAAATAGCCTACTTTGAA GGATGCCTCAAAATTCTACATTTTGTAGCAGAAAAATGCTGTAGGGAGCC TACAAATAATCGACCTTTTCTTGATTTCAGTGCCTTTCACGTCGGAGTCA GTTTAACTTTTCTTTTTCCTCACTTTGCAGTATATTTGTCAACTTTTATG GCTAGTACAAGTTAATTACCACACAACTCAGGGAAAACCTTCCACAATAT TGACCAATCAGAGAGCAGAACCAACAAAGATCAACCAGATCACCACGCCC ATCGAACCGAGTCGTCCAAAAAGTCATGAACAACGAAAGAAGAACACAAA AGGGAAGAAAATTCCACTTGTCAAGGAATTTCCACTTCAGCATTTGATCA ACATTGGACTCACTTCAAGTAAGGCCTTTGCTATCTTAAAATCTGTGACA ACGAGTACGTATATTCAATACGTGGCTCTAATCCATGAGATCTGTTTAGT TACAATACGGCGAATATACACGATTTCAATACTAGAAGTATAAACCATAA GCCACAATCTTTGAGTATTTTCCGTAACATTTCTGTTACAACAGAACATA GGAACCAACGAAAGTCTCTCTATGATGCTTTTCGTAACTCATCACTTATT GATTTACTTTTTGTAGATGAAGCAAATACATTCATCCGCGGAAAAGTGTT GAAAGGGAAGTCTCTAGAGGTTCAGTACGAACGAACGCGAGAAAATGATA TGAACGAAATCGAGGAAGGAATATTCTTCACGCAAAATCAACTCAAACTC CTCATCAAGAATAACACATCGAAGAAGAAGGAACTAAGAGTCCGAAAAAT GAAAAAGAGAACTGTTAGACGGAAAGTTTTATCCAAGGAAGATTTGATGA GACGGCAACTTGGGTTCATTTAA

Coding sequence (CDS) from alignment at sc0000293_pilon:210217..211139-

>XLOC_004578 ID=XLOC_004578|Name=XLOC_004578|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1038bp|location=Sequence derived from alignment at sc0000293_pilon:210217..211139- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTTTCGTCGTATTTTAAATATGGATTTTCGTCGTATTTTAAATTA
TATTTGTCAACTTTTATGGCTAGTACAAGTTAATTACCACACAACTCAGG
GAAAACCTTCCACAATATTGACCAATCAGAGAGCAGAACCAACAAAGATC
AACCAGATCACCACGCCCATCGAACCGAGTCGTCCAAAAAGTCATGAACA
ACGAAAGAAGAACACAAAAGGGAAGAAAATTCCACTTGTCAAGGAATTTC
CACTTCAGCATTTGATCAACATTGGACTCACTTCAATATATTTGTCAACT
TTTATGGCTAGTACAAGTTAATTACCACACAACTCAGGGAAAACCTTCCA
CAATATTGACCAATCAGAGAGCAGAACCAACAAAGATCAACCAGATCACC
ACGCCCATCGAACCGAGTCGTCCAAAAAGTCATGAACAACGAAAGAAGAA
CACAAAAGGGAAGAAAATTCCACTTGTCAAGGAATTTCCACTTCAGCATT
TGATCAACATTGGACTCACTTCAAATGAAGCAAATACATTCATCCGCGGA
AAAGTGTTGAAAGGGAAGTCTCTAGAGGTTCAGTACGAACGAACGCGAGA
AAATGATATGAACGAAATCGAGGAAGGAATATTCTTCACGCAAAATCAAC
TCAAACTCCTCATCAAGAATAACACATCGAAGAAGAAGGAACTAAGAGTC
CGAAAAATGAAAAAGAGAACTGTTAGACGGAAAGTTTTATCCAAGGAAGA
TTTGATGAGACGGCAACTTGGGTTCATTTAAATGAAGCAAATACATTCAT
CCGCGGAAAAGTGTTGAAAGGGAAGTCTCTAGAGGTTCAGTACGAACGAA
CGCGAGAAAATGATATGAACGAAATCGAGGAAGGAATATTCTTCACGCAA
AATCAACTCAAACTCCTCATCAAGAATAACACATCGAAGAAGAAGGAACT
AAGAGTCCGAAAAATGAAAAAGAGAACTGTTAGACGGAAAGTTTTATCCA
AGGAAGATTTGATGAGACGGCAACTTGGGTTCATTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_004578XLOC_004578-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000293_pilongenomesc0000293_pilon:210217..211139 -
Properties
Property NameValue
Aaloc265-519:256
Aaloc25-261:744
Aaloc1-24:924