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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000293_pilon:299389..302056+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004573 ID=XLOC_004573|Name=XLOC_004573|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2668bp|location=Sequence derived from alignment at sc0000293_pilon:299389..302056+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGACTCTTTGCGAAGCTGAAGAGTACATCCCAAAGATACCTGGCCA
ACTCGTACTTAACCTCCTCAACATTGTTTTCACAGTAATTGCCATATTTG
GAAATGCACTCATCATTGTGGCTatcctcaaatcaaaacaacttcGTTCA
CAGACCTCTATTTATTTCATTCTCTCGTTAGCTTTATCTGATTTCTTGGT
TGGGCTTGTTGTGCAGCCTTTGTACAGTTTGGTGTTGATAGACTGGTCAT
ACCACACTTGTCAGATACATCATTATAAATTCGCTATTGCATTTTTCACG
TGTTCAGTATCCATTGGAAACgcgttttgtgtttgttttgatcgcATGTT
ACGGATCACGAAACCGTTCCATTATGAAAATTACGTCACAAAGAAACGGG
CATTGCTTTTATGTATCAATATGTGGTGTATGGGCGTGGCAGTGGGCGTT
ATGGTTGCTCAACCAGAGACAGAGCTCCTAATGGCTTATGGGGCACCAGT
AGAAATGTTGATCTCCTTTATCATCTGCATATACTGTGCTGTCCAGATCT
ATAAAGTAGGACAAGAACAGATTGAACGCATCACAAAATCCAATGGTTCt
gattcaaaacaaagaaagaagaagCAAGTACTAATGGAACGAAAATTATC
GAGCTCTCTAGTTTCCGTTCTAGCAACTATTGTCATTTGTTGGGGACCTT
TCGCGATTGTTAATCTCATCCAACAATATACAGACGATGATAGTGAGCAA
TGGATACTTCTTTTTAAAGTTCGCTTATGGACAGTCCTGTTCGGATACTC
TAAAAGCACAATCAATATTTTCATCTTTGGGTTGACGCATCGTGATATAA
AGACAGCTATACGTAACATCTTGACCCTCCAGGATTCAAAACGATCCAAT
TTAGAACTAAGACCAATGAATAGTGTAAATAGTTATGGATCAACCAAGCA
ACAATGGACACCTGAGATGGGAAAGAAAAATAACGCACTCGAATTGCCCT
GAAATAAAAGCTGACAATATTTAGTTGATACAGTGGTTCAGATTCTTGCT
TGTCTATGAAATGCTCTTACGTAAAAATCTTGTTGAAAAACAATGTCTGA
AAATAATTACCGAAAATTAATTAGAAACAAGGTTTGTTTGATTCatacaa
aaataagaaaattatcaaaaatcatttcaaagttCCAGCGCCTAATAAAT
CGAggctatttatattgtcttCATTCATACATATATTTCTTGTCTCtagt
atttttataaaatatttattttcaaaatagaccTACTTGTAGAGATTTCA
TTCTACATCTttcaaaaagatatttttcaaacagAGTGCGCAAGTCTTCA
TTCACTCCAGGCATTGTAGTTATTTGTCGAGTTTTCACATCCCTCCAGCT
CCAATCGATtatgatatatttgacattagaTAGATCCAGACCGTCTATAA
ATAACGCAAAAATATGATTTAAACATCAACCTCGACTACTTCCTAGCTAC
TATTTGTTTATTGTGTAAAAAGGGTCTTACTTGTTCACTGTGTATGAAAA
GGGTCTTATTTTTCACTATGTGTAAAAAGGGTCTTATTTTTCACTATGTG
TAAAAAGGGTCTTCGTATTTTACATGGCATATGTGAAAATACGAATTGTA
AACATGCAAGGAGCTGTcatttatttcttcaaaaaaagttgaaacgaATA
CATCCATCTCTTACCTTCTTCGATGAGTTTCAATATTCGATTCGGTGTTC
CAACTCCGAGATGTACAATGTTACTTTTCAAGTACTTCACTTGCTCTGAT
ACCTGCGCAATAGTTGAAGTGATTATCAAAACGTATCTTAGCAGATGGAC
GAACAAAGGATTTAGAACTGAGGAATATGCCAGGGAAATTTCAGAGTATT
CTATCAAATACCGACGTCTATAGTCTAAAgagttttaagaaaaacaaaga
tatGCAGGAAACAGGGTATAGTAGGGGACCAATCCTTAGGATCCGTGACA
TATTTTATGCGACGCAACCGCATGTCGATAGAgtacgattgacgtcaaat
tttgtctaaaccGTACGGAGTCTGACAGAATTTTGAACTTTAAGTGGCCG
TATTTCTTTGCGTGTTCGAGTAAGAGACTtgttgtagtatacttttttgc
tcagaatttcatgttcTTTCCGATGGTCCCATTCATTTCTTTCggatttg
acttttgaaaaacgtcaattttttacttattttttttccCTTACAGTTTT
GCCTGTGAACGTCAGTTTTTTagtcataaaaacttttgccgggCCTAATT
GGCCCCCTACTAGTAGGAGGAGAACATTTATAGATGTTTACCTTGAAATG
TTTGGCAAATAATTTCGTGCATTTGCATTGCTCCCCACGAAAAGCTTTCG
TCTCCCTATAAGTAAAACATGCAGTAAATTTTACTTATTGTCATAATACA
ATCTTACTCTTGATATTTGCTGTTACTACTGCATTCACGAAATTAAAAGA
TTAAACCATTTGAAAATTCTACCATCAAAAACGTAATTTTATAAAAGCTT
TTACCGTAGAAGATCAACAGCTCTTTGTCCACCCGAAGATATGATCAACA
TGGCAGGAGaagatttgatttttaatttggtATGGCTGTCCATGTCAGAT
TGCCAATCCTCGATTACT Coding sequence (CDS) from alignment at sc0000293_pilon:299389..302056+ >XLOC_004573 ID=XLOC_004573|Name=XLOC_004573|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1944bp|location=Sequence derived from alignment at sc0000293_pilon:299389..302056+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGACTCTTTGCGAAGCTGAAGAGTACATCCCAAAGATACCTGGCCA
ACTCGTACTTAACCTCCTCAACATTGTTTTCACAGTAATTGCCATATTTG
GAAATGCACTCATCATTGTGGCTatcctcaaatcaaaacaacttcGTTCA
CAGACCTCTATTTATTTCATTCTCTCGTTAGCTTTATCTGATTTCTTGGT
TGGGCTTGTTGTGCAGCCTTTGTACAGTTTGGTGTTGATAGACTGGTCAT
ACCACACTTGTCAGATACATCATTATAAATTCGCTATTGCATTTTTCACG
TGTTCAGTATCCATTGGAAACgcgttttgtgtttgttttgatcgcATGTT
ACGGATCACGAAACCGTTCCATTATGAAAATTACGTCACAAAGAAACGGG
CATTGCTTTTATGTATCAATATGTGGTGTATGGGCGTGGCAGTGGGCGTT
ATGGTTGCTCAACCAGAGACAGAGCTCCTAATGGCTTATGGGGCACCAGT
AGAAATGTTGATCTCCTTTATCATCTGCATATACTGTGCTGTCCAGATCT
ATAAAATGAAGACTCTTTGCGAAGCTGAAGAGTACATCCCAAAGATACCT
GGCCAACTCGTACTTAACCTCCTCAACATTGTTTTCACAGTAATTGCCAT
ATTTGGAAATGCACTCATCATTGTGGCTatcctcaaatcaaaacaacttc
GTTCACAGACCTCTATTTATTTCATTCTCTCGTTAGCTTTATCTGATTTC
TTGGTTGGGCTTGTTGTGCAGCCTTTGTACAGTTTGGTGTTGATAGACTG
GTCATACCACACTTGTCAGATACATCATTATAAATTCGCTATTGCATTTT
TCACGTGTTCAGTATCCATTGGAAACgcgttttgtgtttgttttgatcgc
ATGTTACGGATCACGAAACCGTTCCATTATGAAAATTACGTCACAAAGAA
ACGGGCATTGCTTTTATGTATCAATATGTGGTGTATGGGCGTGGCAGTGG
GCGTTATGGTTGCTCAACCAGAGACAGAGCTCCTAATGGCTTATGGGGCA
CCAGTAGAAATGTTGATCTCCTTTATCATCTGCATATACTGTGCTGTCCA
GATCTATAAAGATTTCATTCTACATCTttcaaaaagatatttttcaaaca
gAGTGCGCAAGTCTTCATTCACTCCAGGCATTGTAGTTATTTGTCGAGTT
TTCACATCCCTCCAGCTCCAATCGATtatgatatatttgacattagaTAG
ATCCAGACCGTCTGATTTCATTCTACATCTttcaaaaagatatttttcaa
acagAGTGCGCAAGTCTTCATTCACTCCAGGCATTGTAGTTATTTGTCGA
GTTTTCACATCCCTCCAGCTCCAATCGATtatgatatatttgacattaga
TAGATCCAGACCGTCTTCTTCGATGAGTTTCAATATTCGATTCGGTGTTC
CAACTCCGAGATGTACAATGTTACTTTTCAAGTACTTCACTTGCTCTGAT
ACTCTTCGATGAGTTTCAATATTCGATTCGGTGTTCCAACTCCGAGATGT
ACAATGTTACTTTTCAAGTACTTCACTTGCTCTGATACCTTGAAATGTTT
GGCAAATAATTTCGTGCATTTGCATTGCTCCCCACGAAAAGCTTTCGTCT
CCCTCTTGAAATGTTTGGCAAATAATTTCGTGCATTTGCATTGCTCCCCA
CGAAAAGCTTTCGTCTCCCTTAGAAGATCAACAGCTCTTTGTCCACCCGA
AGATATGATCAACATGGCAGGAGaagatttgatttttaatttggtATGGC
TGTCCATGTCAGATTGCCAATCCTCGATTACTTAGAAGATCAACAGCTCT
TTGTCCACCCGAAGATATGATCAACATGGCAGGAGaagatttgattttta
atttggtATGGCTGTCCATGTCAGATTGCCAATCCTCGATTACT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000293_pilon | genome | sc0000293_pilon:299389..302056 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 862-972:2558 |
| Aaloc | 796-858:2343 |
| Aaloc | 709-792:1717 |
| Aaloc | 556-708:1294 |
| Aaloc | 1-555:1 |
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