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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000392_pilon:163171..165786- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004198 ID=XLOC_004198|Name=XLOC_004198|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2616bp|location=Sequence derived from alignment at sc0000392_pilon:163171..165786- (Clytia hemisphaerica_ch_hm2_pilon)
CATTTTTCATTTATAGCTTTCCGTAAGCGATTGAGAAGGGCGTACCGAAA
ATTTAGATATGGAACACCAGCTACAGGTAAACTTTTATACCTTACTTGAA
CAATTTTTGGTTTTTCTTTTTTTTGTCGAAAATCGCATTAATTCGTGAAA
ATTAATCAAAGCTAAATTTAATGAGTTACAGATCAACGCCTAGTTAGCAT
AGGATAAAGGGCTGACTGGTATCGTTAATGACAATGGTACTGTTTACACC
CCTTCTCACAGTCCCACTGGGACCCCTTTCCACTGGAAAAATTGGCCAAA
ATATCGTCCCCAGTGGAAAATTATACTCTGATTTTTGTCCCCGTTGAAAA
TAATCAGATAAGCAAATCCTCACTGCAAAATAATGTGCTATTTTTTCTAT
CCCACTGAATTTTTGCTAGAAAATAATGTAATTGAAATCCCTAGTATTAG
CAATAAAAAACATGGTAATATCAATCACCATTTGGTCCGTTATTTTACCC
CCACTGGCTGATAAAATCCCACCGGGTCTGTGAGAAGGGGGTGTCTTTCT
CATTTAAAGCAACAGATTTTCCTTTCTCCTTTAGTCTTTTTGCACAGATT
GAGAACGTTAAGTATTAGAACGCGTTCAGATTCATATTCTTGAAATAGCG
CTTTTCTTGCTGTCGTACATGAAGATCAGTACGAAAAACAAACTTTATAT
AATTGTTACATTATTGCCCCTAAAATTAATCTTTAATACTTTTAGGTGGT
GGATATAAGATGTTGCCAGACCATATCAAAGGTAATATTTATTCATCAAT
TTTGCTCTTCACATAGGACATTCGATTTGAAACGTTAAAAATCTTTTGTT
CACTATTATCATCTGGATAATGAAATGGACACTTTAATTCTCAGATCTTT
CTTTAACAGTTAGGTCGTGTTCAGACCTGAAAGTTTAAGGGTGGTTTTTC
ACTGAGACTGTCTGGCGAAAATTGATTAGCTGAAACAAAGAAAATTGATA
GGAAAGCATTACTGACTCCCAAAACAGTTGTCAAAGCGTTTACAACCCTT
TGAATTTGAAGAAAATTTTATTAAAAATCATCAACTCGCATATCAAGGGA
TTTAAAATTACAGCCTTCTAATGGACATTTTCTGTGATAAGATTCCTCGT
CTTTTGTATCAAATCAATACATATGAAAGTTTGCTCTTCAACTCTATCGG
GAAAGAAAACACTTTTCCCATATGACAAATTTTTTTACAAAAGAATCCCA
CTGCACATTCTGCTACTTTTATGGTAACCAATTTATTTATGCTGTCTTTT
TCGCTTAATTGGTCATTAAGCCAAGAGAGCTCTAGCCCTCTCTTGGAGAA
CAAAAGGTTTAATGACCAATTTTCGACATTAAATCTAGAATGCTGATATG
AAGCCATAGTCATTATAAAAAACACTGGTCTGGCAATGTATTGTTTTAGC
TTTATTGTCAAATTTTCTTTTGTTATAAATAAAAGGCAAGATGCGATTTG
CAAACTTTTTGATCACGTTACCAAATTCTCCTCTTGGGATTGGTCTAGTT
TTCAATCACATGATCAAAAAGTATGCAAAACAAGTCGATTAGCGAACGCA
AGCTCTAACTGTTAACAATAGAAATAAACAAAAGCCTTCCAGACCGGGGT
TTTTATAATGACTATGATGAAGCCATCAAAATCTGATGTTAAGCACGAAT
CTTCATTGTATATTTTTTACAACCCTTAGAAATTTATGAAAAGGACCGTT
GATGAGAACCACTTACCTATCTAGCGTAGTGAAAAACCACCCTAAGTTTA
AGGTTTAAATAGTACTTTGTTGATATGGGATTGGAATTCAATTATAATCA
CTTTTCTTTTGTCATCATCGATTGGTGATCTCGAGGAATCTCCTTTCCTA
ACTTGAAATCATGTCATCTTCTCTCTTGAGACACTTTGAAACAAAAAAGA
TTTCAGGGAATCCCTCTGCAAGACGCTAATTCGTGTTCGTTGAAGCCATT
ACTGCTAGAGATGCTCCGAGCGTCTCTAAGTCATAAATTTCACGTTCTTT
TTTCTTCATTTACAAAAGGAGCATGCTTTTCACTTGCGAATTCTGATTTC
GTCTATTCAGAAAACTGTAACGAAATCGTAAAAACTTTTTTTTTAAACCA
GAGGGTGATTCCTTTTTAAACTTTGGTTTAACTAATGAGAAGCGTGCCGT
TAAATACAAAAGGAATATAAAAGAAACATGTAGACCTAATTGCTTTAAAC
CTTGGTTTGAACACGACCTTAGTGTCTTTCTTTTTGCTCGCCTGATGACA
AAATCTCATTCAGCTTATTTATAAACGTTTGAAAAGCTATAATTCTTTTC
TTCCTTTTTTTATAGAAAAAAGCTTCTATGATATGAGGGGAAAAGTAGAA
TTTGAAAATGCTTTTATTTGCATGATGGAAAGAATTGAAGAATCGCAGCG
AAGACTATTTACAAGTAAGAAGATTGGTCCTCAACTTGATGTACCAAAGC
GTATCTTTGAACGTCTCGGAAGTGAATTTCCTTCTTACAAAGTAATCGAA
TTGTGCCAAGACTTGAGGGAAATTGGTGTAAAAAACTACATATTGACTTC
GTTTACTGATGACATT Coding sequence (CDS) from alignment at sc0000392_pilon:163171..165786- >XLOC_004198 ID=XLOC_004198|Name=XLOC_004198|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=714bp|location=Sequence derived from alignment at sc0000392_pilon:163171..165786- (Clytia hemisphaerica_ch_hm2_pilon)
CATTTTTCATTTATAGCTTTCCGTAAGCGATTGAGAAGGGCGTACCGAAA
ATTTAGATATGGAACACCAGCATTTTTCATTTATAGCTTTCCGTAAGCGA
TTGAGAAGGGCGTACCGAAAATTTAGATATGGAACACCAGGTGGTGGATA
TAAGATGTTGCCAGACCATATCAAAGGTGGTGGATATAAGATGTTGCCAG
ACCATATCAAAGAAAAAAGCTTCTATGATATGAGGGGAAAAGTAGAATTT
GAAAATGCTTTTATTTGCATGATGGAAAGAATTGAAGAATCGCAGCGAAG
ACTATTTACAAGTAAGAAGATTGGTCCTCAACTTGATGTACCAAAGCGTA
TCTTTGAACGTCTCGGAAGTGAATTTCCTTCTTACAAAGTAATCGAATTG
TGCCAAGACTTGAGGGAAATTGGTGTAAAAAACTACATATTGACTTCGTT
TACTGATGACATTAAAAAAGCTTCTATGATATGAGGGGAAAAGTAGAATT
TGAAAATGCTTTTATTTGCATGATGGAAAGAATTGAAGAATCGCAGCGAA
GACTATTTACAAGTAAGAAGATTGGTCCTCAACTTGATGTACCAAAGCGT
ATCTTTGAACGTCTCGGAAGTGAATTTCCTTCTTACAAAGTAATCGAATT
GTGCCAAGACTTGAGGGAAATTGGTGTAAAAAACTACATATTGACTTCGT
TTACTGATGACATT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000392_pilon | genome | sc0000392_pilon:163171..165786 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 115-363:250 |
| Aaloc | 79-111:1870 |
| Aaloc | 7-75:2617 |
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