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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000376_pilon:209929..215195- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_004171 ID=XLOC_004171|Name=XLOC_004171|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5267bp|location=Sequence derived from alignment at sc0000376_pilon:209929..215195- (Clytia hemisphaerica_ch_hm2_pilon) ATGTTTGTTTGGTATAAGTTATCCGGTCTATTTCCTGCAGTTTTAATGCT
ATTTATTACAATCACCACCGATTGTGCTCGCCCAGAAAAGAAAGATGTGA
TTGTAGGTCTAATAAGTAAATGTATGCAACGACCAATCGGTCAAAGAATT
GCGATGGGATTAGTGATGAGTAAAAAGATTGGTATCTTGGCTAGAACAGG
ATTTATCGGCAGATACAAGGAGTTTGACGTTTGTGAAGATGAGCGAGATC
TTGTAGAGACACTGAATAAACTTTTACTGGAACCAGAATGGATTCTTAAA
GACGAGCGATTGAGAATAAAAGGAATCATTGCATTTATACCTGAAAACTT
ACTGAAGTTGGCTGTGTCAATATTATCCTACACTGACATAAAGGTAGAGG
AGCATTTTCTCTTTAATGCCATTTCATTCTTCTATTTGGGTCGCGTTTTC
GACTTGGCAGCGTGGGTTACGGACGTATCCAAACGGTTGATTTTTGGCAT
TATTCCTTCTCATCGGAGTGGTTCTTTTTTATGAAAATGCAGACTACTCA
TTTATAACCATCGTTGCGTGACGTGTAACTGGACATTTTATCTTTTACGC
TGAAGATTGTCACAAAAGTGGCATGAAACTGCCAGTAACAGAATAAACTA
GTCATAGCTTTCACTAAATGCCCCCACAGAAAGGTCATGTCATGCAGTTA
TAAAGCTTTTAATAAAAATAATCAGGAATAATTGATTGCATGATTTAATT
ATTTATTAATTGATTGAAAAAAAATCATATTCCATTAACAAAATACTTGA
AGAATTCATGCAGCTTGACAATTTAATGAAATTCAAGGAAAAGCTGGAAA
AGCTTCTCAAAAACATATTTCGAAAATCATGGTATCATTATCTTACTGAC
TTTCACATCTCCTTGTTTGTTTGTTTTTTCTTACAACAATATATGTCATG
ATCATTCACTAAATAGACCTTTTCCGATAATGCTGCAGACATCTTAGATT
GTAGGCAAAATATATAGCGGTGCGGTGAATAAATCAACAAGGTAACCAAT
CAGAAATAGCTTGTTTATTTTTCATTGGCTGCTATATATTTCAACAACTC
TCTATTGCTACTTTGCCTAATAAACAATAGTAAGATGATAAGATGATAAG
ATGATACTGCGTATAAAATTTATCAAAAAGTTCTGCGCCATCTGAAATAG
ACCAATCCTAGTTAAGGCCCGGGTTCCACTTGCGTACGCTGTGATTGCAG
TCAAAAGAAAAATAAAGGAATGTCATTGTGGTCCATTCAGGCGTACAGTC
GAAAAGTTGAAATGTGCCTAATTTTTTTTCAAGTGCATAGTACTTTTTCA
TGATGCAATCTTTTCTCCAAGCTGAAAGGATTGAAGCCATTAAGATATGA
TTGCAGAGCAGACAATGAAGAGACGGGCCTTCAGGAAACTAGACTTTTTG
AGTTTTTAGCTATATACTCTCACTTTATGGTGTTCCTGTATGACTGTCTG
TGTGCCTACTCTAACCACCGTTAAATACCTTAACTTGGAAAGCTAGAATT
GGAGCATTTTCAACAAACCCCCAGAGCGTAAGTTATTTAGGCTATGGGGC
CATCCATACACATACAGTACGTACGCAATGAAGGGGGAGAGGGGGGTTTA
GCAAAAGCGTACATCTATTGTTTAAATGACATCATTTCTATTGTTCTCTG
CGTACAAGGGGGGAGGGGGTATCAAATTTTTGGAAAATCTTTGCGTACGT
ACTATTATATGAATGGACTATATGGACGGCCTCTATCACAACTGCATGAA
AAAGTGGAACGTGCGCATGCAAAGTTAAACGAATGTAAACAAACTTTTTT
CAGGCTTTTGAAATAGATTTACCACACAAACAGTGAAAACACTCTAAGTG
AGGTAAATCTATTTTGAAGACCAAAAAAAAAATATTGATATTGACATTCA
ACCACTTTTGGATAGACCTTTTTTCAAAAAGGACGTCCTGTTGAATAATT
ATGTAGTCCAGCCATAAAAACAATGATAGTGCACTGTATCAAGCAAATTG
TAATAATTATGCATGCTTTTATCATTGTTTTTCTGCTGGACTACATAATT
ATTCAACAGGGTGGCCTCTTTGAAAAAAGGTCTATTCAACTTTACTCACG
TGCACATTCAACTTTTTTGTACTTTGCCGGTATCTTGTTTTACCAAGTTA
AGAAGGACTTTCTCGTGTTACGACCATATGATGGTCTTTAAAGCTCAAGA
AGCTCTATAAACAATAAAGCTAGTTATTAATATAATAACAGAACAAAAAT
ATCAAATGTACATTTGAAAACTTGAGCAAACTTCTTTAAAGATTCCAGAA
AAAGAATTGAAATCATTGCTGAAATAAACTTCTGACTAAATTACAGTATT
TAGTATTCAGTTTGAAAGACAAGAAACAAAATTTGACATACAAAACACTT
TTTCCAGTCAACGAATCAGCTCATCATCATAACCAGTCTGCCATTTTGTT
TGTTTTGATTTGCACAAGTAATATTGTAATTCGTGTTATGGTGTAATCAC
TATACTTTTTCTATAATTTGCATTTATACACTCGCTTCAGCTTTTCAATG
CTAAATCGAAACTAATAAAATGTAATACGCAATAATGGTAATAGCATGTA
ACGTAATATGAAAATATGTATAACATTTACCGCTGTATAATTTACCGCCA
TATTTTTGCGGAACACTAAATTGGCCGGAAAGCCGATTACGACGCAAACA
CAAAAACAAAAACAATTCGCAAAAAATCGAGATTCCAGTCCAATATATTG
CGTGAAGCTATGAGTGCCTCCTCAGTCGCTGCGCTCCTTGCGGGGGCAAA
AAGTGTCTTTTATTCCTGAGTGATTATTTTTTACGCTATTAATCTTTTAC
GAGCCTGGTCCAGAATCACAGGCTCTATGACTCGATGACAAACTGAATTT
TCAACTTTCTTTGCTTCTATTTTTTTCAGGTTTTTCCAATGTTTAAATTA
TCAGATGACTATCGACGTTGGTCAGACAATTTCATTCATTTCGAACCAAT
TGTTGCTATGATACCAGAAGATATTGTTGTTGATATCATCAAAAAATTCG
ATTGGAAGCACGTGGCTATTGTTCAAATCAAAAGAAATTCTATCGAAGAC
AAGGATAAGTTAAAAATGGATAGGATTCGAAGAGAGTTACCAAACCTTTG
TTTTGATTACCAGAACCTAAATACGACGAGTGTAGCTATTGATGATGGCA
TCAAAAGAAGGTTATTTGAGACATTGAAAAGAGACCAATCAGTAAAAGCT
GTTATCATCAAGGGTATGTAAAATTTAAATCAAGTCACTGCTCTACACAC
GTCATGCTATAACTTGACAGTACCGCCAAATCGTCAACCATTATCCTCAT
TAGCCACTAGTAATCATCTTAGTAACCCCCTGTATCCATACAGCACCTTC
GTTGACCATGTAAACTTTTTATTGATCAACTACTACTCTCATAAACAATC
TTTTAACTGCGCGTACCCCGAAAAAAAAACAAAAAAACCATCTAGTACTC
TCGGTAACCATCTAGTTCTAAAAATTCTTGACTCAACTTTCCATTTTCTT
ACTAGGTGATCTAGCAGCTAAATTCATGTTAGACGCTGACAAATATGGTG
TGAAAAAGTACTGGATCCTACTCTCACAATATCGAGAACCAGAAATAGCC
CAAAATCACCCAGAATTCATTGGTATCGTCCGATCAATCAAGAATTATCG
ATATCAGAAAATCGAGTACCATAACGACACGGTGTGCTCCCAACCAACTA
AAATCATGGAGGTTTTCAGACACCAGGCAAAAAGTTGCTCCTCAACGGAA
GTTTCTTCACAAAATTCCCGTTATCTTGTAGATGAAATTAAATACGCCTG
GAGTATTTTGATACCAAACCGTTTAGTAGTTGTACGAACTATATTAGAAG
ATGGTTTTTATAATTATATGGATGTTGTACAATTCTATAATAATAAAGTT
CATTCCAAACAACGAGTTAAGAATCTGAAAATTACTCAAAAAGCTATCCA
ACTTGGTACTGGTCAATGCCGAGAATGTAAAGAATGCAAGAATCAATGCT
TGAAGACAGGACCTCGTGTTGTTGAGCCTGTTAATTATACCAAATCATTC
GCTCTCGGGTGTTTGAAATGTAGACAGGGTTTAATATTCGATCCGGAATA
TGGGACCTGTACCGAATGCCCTATCCACACTATGGCTAATAAAAATCAAA
CTAAATGTTATGACCCTTACATCAAGGAAGATGTATTCTTAGCGTGTTAT
ATCGTCAATGGTCTTGGATTACTCTTGTGTCTTTTTACAGCATTTGTCTA
TTACAGACATAGAAATACACCTGTTGTTCGTTCAAGTGATTTCACGCTCA
CAATCATCCAACTGTTGCTATGTGCCGCCATATTTGTTGCGTTACCAATA
GTAACGTTAGCTCCGTTATCTTGGTTTGTTTGCACTGTCAGACCATGTGT
TTTTGGGATCCTCCTGGTAGCGATCGTATCCATTGTGGTATGCAAAGCGG
AGAAAATTTTGATCATATTTTATACGCGTCGGCGCTTAACACCAAAAGAT
ATCAAAGATCTTTATATTCGTCAGCTATGTATCTTTTTATTCTTGCTCAT
AATCGATATGATCATTTTACCGACAACTTTCCGACTACCATCGTCGGTTA
AAACTCGCAAATTCCCGACTACGAGTGACGATACGTACTTGATACGATAT
TGTAGTACCGATGATCGCTTCGATGTACAAATCGTGTATTGTATCGTGCT
TTTATTATTAGCGATCGCGCAAGGATATCGCGGTCGAAAACTGCCAAGTA
ATTATAATGAAGGCAACTCAATCATCGTAAGTGCGTCATCCACGATTTGC
GCTTTCATTTTCAAAATCTGGATAACAAACACACCACGACACCGATTCGA
AAGAACATCTACAGTATGGTTATCTTTGAGTGTCAGTGTTCTATTATTAA
TTTTTACCTCTTTACGGACCAAAGGTATACATTATTTTACTTTTACCGCA
TAAAAACACTAAGAAACATATTATGAATCGAATGTTATCTGACAGTTCTA
TGAAAAGATCTGAAGTAGCGTTTTCTTTTCGTAAACGACAAAGCAAGAAA
CAATTACTGGATCCTTCTGATATCAGATTTCTCCCTAAAAACAATAATGA
TGACGGGGGTAGTGATGTTGATGGTAATGAGGATGAAATGATTGAGATGA
ACGACCTGTCAACGTGA Coding sequence (CDS) from alignment at sc0000376_pilon:209929..215195- >XLOC_004171 ID=XLOC_004171|Name=XLOC_004171|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4778bp|location=Sequence derived from alignment at sc0000376_pilon:209929..215195- (Clytia hemisphaerica_ch_hm2_pilon) ATGTTTGTTTGGTATAAGTTATCCGGTCTATTTCCTGCAGTTTTAATGCT ATTTATTACAATCACCACCGATTGTGCTCGCCCAGAAAAGAAAGATGTGA TTGTAGGTCTAATAAGTAAATGTATGCAACGACCAATCGGTCAAAGAATT GCGATGGGATTAGTGATGAGTAAAAAGATTGGTATCTTGGCTAGAACAGG ATTTATCGGCAGATACAAGGAGTTTGACGTTTGTGAAGATGAGCGAGATC TTGTAGAGACACTGAATAAACTTTTACTGGAACCAGAATGGATTCTTAAA GACGAGCGATTGAGAATAAAAGGAATCATTGCATTTATACCTGAAAACTT ACTGAAGTTGGCTGTGTCAATATTATCCTACACTGACATAAAGATGTTTG TTTGGTATAAGTTATCCGGTCTATTTCCTGCAGTTTTAATGCTATTTATT ACAATCACCACCGATTGTGCTCGCCCAGAAAAGAAAGATGTGATTGTAGG TCTAATAAGTAAATGTATGCAACGACCAATCGGTCAAAGAATTGCGATGG GATTAGTGATGAGTAAAAAGATTGGTATCTTGGCTAGAACAGGATTTATC GGCAGATACAAGGAGTTTGACGTTTGTGAAGATGAGCGAGATCTTGTAGA GACACTGAATAAACTTTTACTGGAACCAGAATGGATTCTTAAAGACGAGC GATTGAGAATAAAAGGAATCATTGCATTTATACCTGAAAACTTACTGAAG TTGGCTGTGTCAATATTATCCTACACTGACATAAAGGTTTTTCCAATGTT TAAATTATCAGATGACTATCGACGTTGGTCAGACAATTTCATTCATTTCG AACCAATTGTTGCTATGATACCAGAAGATATTGTTGTTGATATCATCAAA AAATTCGATTGGAAGCACGTGGCTATTGTTCAAATCAAAAGAAATTCTAT CGAAGACAAGGATAAGTTAAAAATGGATAGGATTCGAAGAGAGTTACCAA ACCTTTGTTTTGATTACCAGAACCTAAATACGACGAGTGTAGCTATTGAT GATGGCATCAAAAGAAGGTTATTTGAGACATTGAAAAGAGACCAATCAGT AAAAGCTGTTATCATCAAGGGTTTTTCCAATGTTTAAATTATCAGATGAC TATCGACGTTGGTCAGACAATTTCATTCATTTCGAACCAATTGTTGCTAT GATACCAGAAGATATTGTTGTTGATATCATCAAAAAATTCGATTGGAAGC ACGTGGCTATTGTTCAAATCAAAAGAAATTCTATCGAAGACAAGGATAAG TTAAAAATGGATAGGATTCGAAGAGAGTTACCAAACCTTTGTTTTGATTA CCAGAACCTAAATACGACGAGTGTAGCTATTGATGATGGCATCAAAAGAA GGTTATTTGAGACATTGAAAAGAGACCAATCAGTAAAAGCTGTTATCATC AAGGGTGATCTAGCAGCTAAATTCATGTTAGACGCTGACAAATATGGTGT GAAAAAGTACTGGATCCTACTCTCACAATATCGAGAACCAGAAATAGCCC AAAATCACCCAGAATTCATTGGTATCGTCCGATCAATCAAGAATTATCGA TATCAGAAAATCGAGTACCATAACGACACGGTGTGCTCCCAACCAACTAA AATCATGGAGGTTTTCAGACACCAGGCAAAAAGTTGCTCCTCAACGGAAG TTTCTTCACAAAATTCCCGTTATCTTGTAGATGAAATTAAATACGCCTGG AGTATTTTGATACCAAACCGTTTAGTAGTTGTACGAACTATATTAGAAGA TGGTTTTTATAATTATATGGATGTTGTACAATTCTATAATAATAAAGTTC ATTCCAAACAACGAGTTAAGAATCTGAAAATTACTCAAAAAGCTATCCAA CTTGGTACTGGTCAATGCCGAGAATGTAAAGAATGCAAGAATCAATGCTT GAAGACAGGACCTCGTGTTGTTGAGCCTGTTAATTATACCAAATCATTCG CTCTCGGGTGTTTGAAATGTAGACAGGGTTTAATATTCGATCCGGAATAT GGGACCTGTACCGAATGCCCTATCCACACTATGGCTAATAAAAATCAAAC TAAATGTTATGACCCTTACATCAAGGAAGATGTATTCTTAGCGTGTTATA TCGTCAATGGTCTTGGATTACTCTTGTGTCTTTTTACAGCATTTGTCTAT TACAGACATAGAAATACACCTGTTGTTCGTTCAAGTGATTTCACGCTCAC AATCATCCAACTGTTGCTATGTGCCGCCATATTTGTTGCGTTACCAATAG TAACGTTAGCTCCGTTATCTTGGTTTGTTTGCACTGTCAGACCATGTGTT TTTGGGATCCTCCTGGTAGCGATCGTATCCATTGTGGTATGCAAAGCGGA GAAAATTTTGATCATATTTTATACGCGTCGGCGCTTAACACCAAAAGATA TCAAAGATCTTTATATTCGTCAGCTATGTATCTTTTTATTCTTGCTCATA ATCGATATGATCATTTTACCGACAACTTTCCGACTACCATCGTCGGTTAA AACTCGCAAATTCCCGACTACGAGTGACGATACGTACTTGATACGATATT GTAGTACCGATGATCGCTTCGATGTACAAATCGTGTATTGTATCGTGCTT TTATTATTAGCGATCGCGCAAGGATATCGCGGTCGAAAACTGCCAAGTAA TTATAATGAAGGCAACTCAATCATCGTAAGTGCGTCATCCACGATTTGCG CTTTCATTTTCAAAATCTGGATAACAAACACACCACGACACCGATTCGAA AGAACATCTACAGTATGGTTATCTTTGAGTGTCAGTGTTCTATTATTAAT TTTTACCTCTTTACGGACCAAAGGTATACATTATTTTACTTTTACCGCAT AAAAACACTAAGAAACATATTATGAATCGAATGTTATCTGACAGTTCTAT GAAAAGATCTGAAGTAGCGTTTTCTTTTCGTAAACGACAAAGCAAGAAAC AATTACTGGATCCTTCTGATATCAGATTTCTCCCTAAAAACAATAATGAT GACGGGGGTAGTGATGTTGATGGTAATGAGGATGAAATGATTGAGATGAA CGACCTGTCAACGTGAGTGATCTAGCAGCTAAATTCATGTTAGACGCTGA CAAATATGGTGTGAAAAAGTACTGGATCCTACTCTCACAATATCGAGAAC CAGAAATAGCCCAAAATCACCCAGAATTCATTGGTATCGTCCGATCAATC AAGAATTATCGATATCAGAAAATCGAGTACCATAACGACACGGTGTGCTC CCAACCAACTAAAATCATGGAGGTTTTCAGACACCAGGCAAAAAGTTGCT CCTCAACGGAAGTTTCTTCACAAAATTCCCGTTATCTTGTAGATGAAATT AAATACGCCTGGAGTATTTTGATACCAAACCGTTTAGTAGTTGTACGAAC TATATTAGAAGATGGTTTTTATAATTATATGGATGTTGTACAATTCTATA ATAATAAAGTTCATTCCAAACAACGAGTTAAGAATCTGAAAATTACTCAA AAAGCTATCCAACTTGGTACTGGTCAATGCCGAGAATGTAAAGAATGCAA GAATCAATGCTTGAAGACAGGACCTCGTGTTGTTGAGCCTGTTAATTATA CCAAATCATTCGCTCTCGGGTGTTTGAAATGTAGACAGGGTTTAATATTC GATCCGGAATATGGGACCTGTACCGAATGCCCTATCCACACTATGGCTAA TAAAAATCAAACTAAATGTTATGACCCTTACATCAAGGAAGATGTATTCT TAGCGTGTTATATCGTCAATGGTCTTGGATTACTCTTGTGTCTTTTTACA GCATTTGTCTATTACAGACATAGAAATACACCTGTTGTTCGTTCAAGTGA TTTCACGCTCACAATCATCCAACTGTTGCTATGTGCCGCCATATTTGTTG CGTTACCAATAGTAACGTTAGCTCCGTTATCTTGGTTTGTTTGCACTGTC AGACCATGTGTTTTTGGGATCCTCCTGGTAGCGATCGTATCCATTGTGGT ATGCAAAGCGGAGAAAATTTTGATCATATTTTATACGCGTCGGCGCTTAA CACCAAAAGATATCAAAGATCTTTATATTCGTCAGCTATGTATCTTTTTA TTCTTGCTCATAATCGATATGATCATTTTACCGACAACTTTCCGACTACC ATCGTCGGTTAAAACTCGCAAATTCCCGACTACGAGTGACGATACGTACT TGATACGATATTGTAGTACCGATGATCGCTTCGATGTACAAATCGTGTAT TGTATCGTGCTTTTATTATTAGCGATCGCGCAAGGATATCGCGGTCGAAA ACTGCCAAGTAATTATAATGAAGGCAACTCAATCATCGTAAGTGCGTCAT CCACGATTTGCGCTTTCATTTTCAAAATCTGGATAACAAACACACCACGA CACCGATTCGAAAGAACATCTACAGTATGGTTATCTTTGAGTGTCAGTGT TCTATTATTAATTTTTACCTCTTTACGGACCAAAGGTATACATTATTTTA CTTTTACCGCATAAAAACACTAAGAAACATATTATGAATCGAATGTTATC TGACAGTTCTATGAAAAGATCTGAAGTAGCGTTTTCTTTTCGTAAACGAC AAAGCAAGAAACAATTACTGGATCCTTCTGATATCAGATTTCTCCCTAAA AACAATAATGATGACGGGGGTAGTGATGTTGATGGTAATGAGGATGAAAT GATTGAGATGAACGACCTGTCAACGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000376_pilon | genome | sc0000376_pilon:209929..215195 - |
Properties
| Property Name | Value |
| Aaloc | 2125-2388:265 |
| Aaloc | 730-2124:1661 |
| Aaloc | 394-726:2289 |
| Aaloc | 1-393:5268 |
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